RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 XRN1Q8IZH2 1706 aaKnown RBP-1.39□□□□□ -2.63
CALD1-218ENST00000478075 TRBV7-3A0A075B6L6 115 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 CCDC169A6NNP5 214 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 CALUO43852 315 aaPredicted RBP-1.39□□□□□ -2.63
CALD1-218ENST00000478075 STX10O60499 249 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 HPGDSO60760 199 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 IFNA6P05013 189 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 IL3P08700 152 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 UBE2D1P51668 147 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 IL18Q14116 193 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 MSMO1Q15800 293 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 DEFB136Q30KP8 78 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 DNAL1Q4LDG9 190 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 LYRM7Q5U5X0 104 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 FKBP1CQ5VVH2 108 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 ALKAL1Q6UXT8 129 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 Q6ZUT4 128 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 TTC9CQ8N5M4 171 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 CDRT4Q8N9R6 151 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 FDCSPQ8NFU4 85 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 OR51D1Q8NGF3 324 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 LCN9Q8WX39 176 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 KIAA1143Q96AT1 154 aaPredicted RBP-1.39□□□□□ -2.63
CALD1-218ENST00000478075 C8orf76Q96K31 380 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 RNASE7Q9H1E1 156 aaKnown RBP-1.39□□□□□ -2.63
CALD1-218ENST00000478075 LRTM1Q9HBL6 345 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 UFC1Q9Y3C8 167 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 RTL9Q8NET4 1388 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 ATP7BP35670 1465 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 SHANK2Q9UPX8 1470 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 PLXNC1O60486 1568 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 RGPD2P0DJD1 1756 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 ANKRD36CQ5JPF3 1778 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 RAD50Q92878 1312 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 CLIP1P30622 1438 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 PRG4Q92954 1404 aaPredicted RBP-1.4□□□□□ -2.63
CALD1-218ENST00000478075 ASXL1Q8IXJ9 1541 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 SHROOM2Q13796 1616 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 RAPGEF6Q8TEU7 1601 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 A0A1B0GV50 99 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 A8MTW9 85 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 EVPLLA8MZ36 301 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 H0Y8G0 127 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 K7EPI3 171 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 PGRMC1O00264 195 aaKnown RBP-1.4□□□□□ -2.63
CALD1-218ENST00000478075 PPP1R17O96001 155 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 NQO2P16083 231 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 PVALBP20472 110 aaPredicted RBP-1.4□□□□□ -2.63
CALD1-218ENST00000478075 CDC34P49427 236 aaPredicted RBP-1.4□□□□□ -2.63
CALD1-218ENST00000478075 CARD18P57730 90 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 UBE2G2P60604 165 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 MRPS36P82909 103 aaKnown RBP-1.4□□□□□ -2.63
CALD1-218ENST00000478075 MED21Q13503 144 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 PMAIP1Q13794 54 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 STK38Q15208 465 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 Q3ZCU0 254 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 SLC25A26Q70HW3 274 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 TRAPPC5Q8IUR0 188 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 IFT20Q8IY31 132 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 LGALS14Q8TCE9 139 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 RAB8BQ92930 207 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 CERS2Q96G23 380 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 PKIBQ9C010 78 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 SLC35B3Q9H1N7 401 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 IMP3Q9NV31 184 aaKnown RBP-1.4□□□□□ -2.63
CALD1-218ENST00000478075 TVP23BQ9NYZ1 205 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 METTL1Q9UBP6 276 aaKnown RBP-1.4□□□□□ -2.63
CALD1-218ENST00000478075 PKIGQ9Y2B9 76 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 R4GMQ9 66 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 V9GYH0 126 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 TCOF1Q13428 1488 aaKnown RBP-1.4□□□□□ -2.63
CALD1-218ENST00000478075 PXDNQ92626 1479 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 RIMS1Q86UR5 1692 aaKnown RBP-1.4□□□□□ -2.63
CALD1-218ENST00000478075 MYH6P13533 1939 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 BTAF1O14981 1849 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 DOCK2Q92608 1830 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 KIAA1551Q9HCM1 1747 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 TECPR2O15040 1411 aa-1.4□□□□□ -2.63
CALD1-218ENST00000478075 MAST1Q9Y2H9 1570 aa-1.41□□□□□ -2.63
CALD1-218ENST00000478075 C1orf167Q5SNV9 1468 aa-1.41□□□□□ -2.63
CALD1-218ENST00000478075 NLRP1Q9C000 1473 aa-1.41□□□□□ -2.63
CALD1-218ENST00000478075 MED23Q9ULK4 1368 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 EP400Q96L91 3159 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 IGHV1-24A0A0C4DH33 117 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 FAM236DA0A1B0GTK5 79 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 UBE2L5PA0A1B0GUS4 154 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 TINCRA0A1B0GVN0 87 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 MAP1LC3B2A6NCE7 125 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 EEF1E1-BLOC1S5C9J1V9 151 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 NDUFA3O95167 84 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 TNFAIP8O95379 198 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 SIX6O95475 246 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 ATP6V1G2O95670 118 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 IFNA16P05015 189 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 FAM236CP0DP71 79 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 TPT1P13693 172 aaKnown RBP-1.41□□□□□ -2.64
CALD1-218ENST00000478075 UCHL3P15374 230 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 NFYBP25208 207 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 ATP5J2P56134 94 aa-1.41□□□□□ -2.64
CALD1-218ENST00000478075 DAOAP59103 153 aa-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms