RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MUC2Q02817 5179 aa12.63□□□□□ -0.39
PDLIM1-202ENST00000477757 TRBV6-1A0A0K0K1D8 114 aa12.63□□□□□ -0.39
PDLIM1-202ENST00000477757 IFNA7P01567 189 aa12.63□□□□□ -0.39
PDLIM1-202ENST00000477757 COX6A2Q02221 97 aa12.63□□□□□ -0.39
PDLIM1-202ENST00000477757 DERL1Q9BUN8 251 aa12.63□□□□□ -0.39
PDLIM1-202ENST00000477757 IQCJQ1A5X6 159 aa12.62□□□□□ -0.39
PDLIM1-202ENST00000477757 MAJINQ3KP22 176 aa12.62□□□□□ -0.39
PDLIM1-202ENST00000477757 PSMG3Q9BT73 122 aaPredicted RBP12.62□□□□□ -0.39
PDLIM1-202ENST00000477757 ZFP30Q9Y2G7 519 aa12.62□□□□□ -0.39
PDLIM1-202ENST00000477757 FAT4Q6V0I7 4981 aa12.61□□□□□ -0.39
PDLIM1-202ENST00000477757 GZMBP10144 247 aa12.61□□□□□ -0.39
PDLIM1-202ENST00000477757 ZNF674Q2M3X9 581 aa12.61□□□□□ -0.39
PDLIM1-202ENST00000477757 IGKV2-24A0A0C4DH68 120 aa12.6□□□□□ -0.39
PDLIM1-202ENST00000477757 MUC21A0A0G2JKD1 596 aa12.6□□□□□ -0.39
PDLIM1-202ENST00000477757 NDUFS6O75380 124 aaKnown RBP12.6□□□□□ -0.39
PDLIM1-202ENST00000477757 MBP02144 154 aa12.6□□□□□ -0.39
PDLIM1-202ENST00000477757 STPG4Q8N801 248 aa12.6□□□□□ -0.39
PDLIM1-202ENST00000477757 C15orf56Q8N910 161 aa12.6□□□□□ -0.39
PDLIM1-202ENST00000477757 C20orf203Q8NBC4 194 aa12.6□□□□□ -0.39
PDLIM1-202ENST00000477757 OR10AG1Q8NH19 301 aa12.6□□□□□ -0.39
PDLIM1-202ENST00000477757 IGHV1-24A0A0C4DH33 117 aa12.59□□□□□ -0.39
PDLIM1-202ENST00000477757 LYPD6BQ8NI32 183 aa12.59□□□□□ -0.39
PDLIM1-202ENST00000477757 HIST1H2BAQ96A08 127 aa12.59□□□□□ -0.39
PDLIM1-202ENST00000477757 SRSF9Q13242 221 aaKnown RBP eCLIP12.58□□□□□ -0.4
PDLIM1-202ENST00000477757 PRSS3P2Q8NHM4 247 aa12.58□□□□□ -0.4
PDLIM1-202ENST00000477757 ENKURQ8TC29 256 aa12.58□□□□□ -0.4
PDLIM1-202ENST00000477757 ACTR3CQ9C0K3 210 aaPredicted RBP12.58□□□□□ -0.4
PDLIM1-202ENST00000477757 ATP6V0CP27449 155 aa12.57□□□□□ -0.4
PDLIM1-202ENST00000477757 RPS10P46783 165 aaKnown RBP12.57□□□□□ -0.4
PDLIM1-202ENST00000477757 UBE2G2P60604 165 aa12.57□□□□□ -0.4
PDLIM1-202ENST00000477757 SERF2P84101 59 aa12.57□□□□□ -0.4
PDLIM1-202ENST00000477757 FMC1Q96HJ9 113 aa12.57□□□□□ -0.4
PDLIM1-202ENST00000477757 GFRA4Q9GZZ7 299 aa12.57□□□□□ -0.4
PDLIM1-202ENST00000477757 F5H697 171 aa12.56□□□□□ -0.4
PDLIM1-202ENST00000477757 RAB5CP51148 216 aa12.56□□□□□ -0.4
PDLIM1-202ENST00000477757 ZNF471Q9BX82 626 aaPredicted RBP12.56□□□□□ -0.4
PDLIM1-202ENST00000477757 IGLV4-60A0A075B6I1 120 aa12.55□□□□□ -0.4
PDLIM1-202ENST00000477757 A0A1B0GUV1 79 aa12.55□□□□□ -0.4
PDLIM1-202ENST00000477757 NKX6-2Q9C056 277 aaPredicted RBP12.55□□□□□ -0.4
PDLIM1-202ENST00000477757 TNFSF18Q9UNG2 199 aa12.55□□□□□ -0.4
PDLIM1-202ENST00000477757 FAM74A7A6NL05 159 aa12.54□□□□□ -0.4
PDLIM1-202ENST00000477757 LTAP01374 205 aa12.54□□□□□ -0.4
PDLIM1-202ENST00000477757 CXCL1P09341 107 aa12.54□□□□□ -0.4
PDLIM1-202ENST00000477757 UBE2G1P62253 170 aa12.54□□□□□ -0.4
PDLIM1-202ENST00000477757 CFAP161Q6P656 301 aa12.54□□□□□ -0.4
PDLIM1-202ENST00000477757 A0A096LNI7 61 aa12.53□□□□□ -0.4
PDLIM1-202ENST00000477757 AQP10Q96PS8 301 aa12.53□□□□□ -0.4
PDLIM1-202ENST00000477757 INMT-MINDY4F8WBC2 141 aa12.52□□□□□ -0.41
PDLIM1-202ENST00000477757 SNAI2O43623 268 aa12.52□□□□□ -0.41
PDLIM1-202ENST00000477757 SSNA1O43805 119 aa12.52□□□□□ -0.41
PDLIM1-202ENST00000477757 ZNF726P1Q15940 193 aa12.52□□□□□ -0.41
PDLIM1-202ENST00000477757 Q6ZRP5 223 aa12.52□□□□□ -0.41
PDLIM1-202ENST00000477757 A6NHS1 94 aa12.51□□□□□ -0.41
PDLIM1-202ENST00000477757 HIGD2BQ4VC39 106 aa12.51□□□□□ -0.41
PDLIM1-202ENST00000477757 SPANXN1Q5VSR9 72 aa12.51□□□□□ -0.41
PDLIM1-202ENST00000477757 TMEM243Q9BU79 118 aa12.51□□□□□ -0.41
PDLIM1-202ENST00000477757 SSBP4Q9BWG4 385 aaPredicted RBP12.51□□□□□ -0.41
PDLIM1-202ENST00000477757 LINC00474Q9P2X8 69 aa12.51□□□□□ -0.41
PDLIM1-202ENST00000477757 GAGE12HA6NDE8 117 aa12.5□□□□□ -0.41
PDLIM1-202ENST00000477757 OR5AL1P0C617 328 aa12.5□□□□□ -0.41
PDLIM1-202ENST00000477757 AP1S3Q96PC3 154 aa12.5□□□□□ -0.41
PDLIM1-202ENST00000477757 MUC21A0A140T8X8 626 aa12.49□□□□□ -0.41
PDLIM1-202ENST00000477757 CTXND1A0A1B0GTU2 59 aa12.49□□□□□ -0.41
PDLIM1-202ENST00000477757 SULT1A2P50226 295 aa12.49□□□□□ -0.41
PDLIM1-202ENST00000477757 INO80EQ8NBZ0 244 aaPredicted RBP12.49□□□□□ -0.41
PDLIM1-202ENST00000477757 GVQW2A0A096LPI5 108 aaPredicted RBP12.48□□□□□ -0.41
PDLIM1-202ENST00000477757 H7C1H1 209 aa12.48□□□□□ -0.41
PDLIM1-202ENST00000477757 SMIM17P0DL12 118 aa12.48□□□□□ -0.41
PDLIM1-202ENST00000477757 TCEAL7Q9BRU2 100 aa12.48□□□□□ -0.41
PDLIM1-202ENST00000477757 FAM231BA6NCW3 169 aa12.47□□□□□ -0.41
PDLIM1-202ENST00000477757 M0QY20 66 aa12.47□□□□□ -0.41
PDLIM1-202ENST00000477757 MARVELD1Q9BSK0 173 aa12.47□□□□□ -0.41
PDLIM1-202ENST00000477757 KRTAP9-6A0A140TA67 174 aa12.46□□□□□ -0.41
PDLIM1-202ENST00000477757 DEFA3P59666 94 aa12.46□□□□□ -0.41
PDLIM1-202ENST00000477757 PKIGQ9Y2B9 76 aa12.46□□□□□ -0.41
PDLIM1-202ENST00000477757 A0A0U1RQV1 116 aa12.45□□□□□ -0.42
PDLIM1-202ENST00000477757 PGLYRP4Q96LB8 373 aa12.45□□□□□ -0.42
PDLIM1-202ENST00000477757 AKR1C3P42330 323 aa12.44□□□□□ -0.42
PDLIM1-202ENST00000477757 UBE2L6O14933 153 aa12.43□□□□□ -0.42
PDLIM1-202ENST00000477757 FHITP49789 147 aa12.43□□□□□ -0.42
PDLIM1-202ENST00000477757 NKX2-5P52952 324 aaPredicted RBP12.43□□□□□ -0.42
PDLIM1-202ENST00000477757 SSTP61278 116 aa12.43□□□□□ -0.42
PDLIM1-202ENST00000477757 SUMO4Q6EEV6 95 aa12.43□□□□□ -0.42
PDLIM1-202ENST00000477757 UPK1BO75841 260 aa12.42□□□□□ -0.42
PDLIM1-202ENST00000477757 MGPP08493 103 aa12.42□□□□□ -0.42
PDLIM1-202ENST00000477757 ZNF664Q8N3J9 261 aa12.42□□□□□ -0.42
PDLIM1-202ENST00000477757 LINC00299Q6ZSB3 139 aa12.41□□□□□ -0.42
PDLIM1-202ENST00000477757 STOML3Q8TAV4 291 aa12.41□□□□□ -0.42
PDLIM1-202ENST00000477757 S100ZQ8WXG8 99 aa12.41□□□□□ -0.42
PDLIM1-202ENST00000477757 CHCHD10Q8WYQ3 142 aaPredicted RBP12.41□□□□□ -0.42
PDLIM1-202ENST00000477757 PSORS1C2Q9UIG4 136 aa12.41□□□□□ -0.42
PDLIM1-202ENST00000477757 IGKV3OR2-268A0A0C4DH90 116 aa12.4□□□□□ -0.42
PDLIM1-202ENST00000477757 AMTP48728 403 aa12.4□□□□□ -0.42
PDLIM1-202ENST00000477757 MLST8Q9BVC4 326 aa12.4□□□□□ -0.42
PDLIM1-202ENST00000477757 MAP1LC3B2A6NCE7 125 aa12.39□□□□□ -0.43
PDLIM1-202ENST00000477757 IFITM3Q01628 133 aa12.39□□□□□ -0.43
PDLIM1-202ENST00000477757 CST9LP1Q5W188 147 aa12.39□□□□□ -0.43
PDLIM1-202ENST00000477757 RASL11AQ6T310 242 aa12.39□□□□□ -0.43
PDLIM1-202ENST00000477757 MAP1LC3BQ9GZQ8 125 aa12.39□□□□□ -0.43
PDLIM1-202ENST00000477757 MED28Q9H204 178 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms