RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ARL2-SNX15V9GYD0 113 aa9.19□□□□□ -0.94
SMG5-204ENST00000476954 IGLV1-50A0A075B6I6 118 aa9.18□□□□□ -0.94
SMG5-204ENST00000476954 IGHV1-24A0A0C4DH33 117 aa9.18□□□□□ -0.94
SMG5-204ENST00000476954 IGKV3OR2-268A0A0C4DH90 116 aa9.18□□□□□ -0.94
SMG5-204ENST00000476954 TSPAN13O95857 204 aa9.18□□□□□ -0.94
SMG5-204ENST00000476954 FER1L6-AS1Q8NA97 138 aa9.18□□□□□ -0.94
SMG5-204ENST00000476954 DIRC1Q969H9 104 aa9.18□□□□□ -0.94
SMG5-204ENST00000476954 EPDR1Q9UM22 224 aa9.18□□□□□ -0.94
SMG5-204ENST00000476954 SH2D1AO60880 128 aa9.17□□□□□ -0.94
SMG5-204ENST00000476954 ARL14EPLP0DKL9 152 aa9.17□□□□□ -0.94
SMG5-204ENST00000476954 SULT1A2P50226 295 aa9.17□□□□□ -0.94
SMG5-204ENST00000476954 SUMO1P63165 101 aaKnown RBP9.17□□□□□ -0.94
SMG5-204ENST00000476954 AQP10Q96PS8 301 aa9.17□□□□□ -0.94
SMG5-204ENST00000476954 A0A1B0GUV1 79 aa9.16□□□□□ -0.94
SMG5-204ENST00000476954 H0Y9J4 135 aa9.16□□□□□ -0.94
SMG5-204ENST00000476954 IGLV7-43P04211 117 aa9.16□□□□□ -0.94
SMG5-204ENST00000476954 DEFA3P59666 94 aa9.16□□□□□ -0.94
SMG5-204ENST00000476954 A0A1W2PPV4 95 aa9.15□□□□□ -0.94
SMG5-204ENST00000476954 F5H697 171 aa9.15□□□□□ -0.94
SMG5-204ENST00000476954 AMTP48728 403 aa9.15□□□□□ -0.94
SMG5-204ENST00000476954 PHF5AQ7RTV0 110 aaKnown RBP9.15□□□□□ -0.94
SMG5-204ENST00000476954 H0YIZ8 118 aa9.14□□□□□ -0.95
SMG5-204ENST00000476954 PTTG1IPP53801 180 aa9.14□□□□□ -0.95
SMG5-204ENST00000476954 TMBIM6P55061 237 aa9.14□□□□□ -0.95
SMG5-204ENST00000476954 CYCSP99999 105 aaKnown RBP9.14□□□□□ -0.95
SMG5-204ENST00000476954 GAGE2BQ13066 116 aa9.14□□□□□ -0.95
SMG5-204ENST00000476954 OR10AG1Q8NH19 301 aa9.14□□□□□ -0.95
SMG5-204ENST00000476954 SDHCQ99643 169 aaPredicted RBP9.14□□□□□ -0.95
SMG5-204ENST00000476954 TRAV6A0A075B6T7 132 aa9.13□□□□□ -0.95
SMG5-204ENST00000476954 MUC21A0A140T8X8 626 aa9.13□□□□□ -0.95
SMG5-204ENST00000476954 TRIQKQ629K1 86 aa9.13□□□□□ -0.95
SMG5-204ENST00000476954 Q86TA4 180 aa9.13□□□□□ -0.95
SMG5-204ENST00000476954 CHCHD10Q8WYQ3 142 aaPredicted RBP9.13□□□□□ -0.95
SMG5-204ENST00000476954 CARD19Q96LW7 228 aa9.13□□□□□ -0.95
SMG5-204ENST00000476954 TMEM243Q9BU79 118 aa9.13□□□□□ -0.95
SMG5-204ENST00000476954 SMIM3Q9BZL3 60 aa9.13□□□□□ -0.95
SMG5-204ENST00000476954 UBE2D1P51668 147 aa9.12□□□□□ -0.95
SMG5-204ENST00000476954 KRTAP11-1Q8IUC1 163 aa9.12□□□□□ -0.95
SMG5-204ENST00000476954 TRAV1-1A0A0B4J248 108 aa9.11□□□□□ -0.95
SMG5-204ENST00000476954 SIX6O95475 246 aa9.11□□□□□ -0.95
SMG5-204ENST00000476954 GCHFRP30047 84 aa9.11□□□□□ -0.95
SMG5-204ENST00000476954 LRRC37A5PQ49AS3 106 aa9.11□□□□□ -0.95
SMG5-204ENST00000476954 C9orf116Q5BN46 136 aaPredicted RBP9.11□□□□□ -0.95
SMG5-204ENST00000476954 SCGB1C1Q8TD33 95 aa9.11□□□□□ -0.95
SMG5-204ENST00000476954 RBM38Q9H0Z9 239 aaKnown RBP9.11□□□□□ -0.95
SMG5-204ENST00000476954 STAG3L2P0CL84 134 aa9.1□□□□□ -0.95
SMG5-204ENST00000476954 STAG3L3P0CL85 134 aa9.1□□□□□ -0.95
SMG5-204ENST00000476954 RPL12P30050 165 aaKnown RBP9.1□□□□□ -0.95
SMG5-204ENST00000476954 SSTP61278 116 aa9.1□□□□□ -0.95
SMG5-204ENST00000476954 SRSF3P84103 164 aaKnown RBP9.1□□□□□ -0.95
SMG5-204ENST00000476954 LINC01559Q495D7 138 aa9.1□□□□□ -0.95
SMG5-204ENST00000476954 ZNF471Q9BX82 626 aaPredicted RBP9.1□□□□□ -0.95
SMG5-204ENST00000476954 FOXI1Q12951 378 aa9.09□□□□□ -0.95
SMG5-204ENST00000476954 PKIGQ9Y2B9 76 aa9.09□□□□□ -0.95
SMG5-204ENST00000476954 CENPXA8MT69 81 aa9.08□□□□□ -0.96
SMG5-204ENST00000476954 S100A5P33763 92 aa9.08□□□□□ -0.96
SMG5-204ENST00000476954 CDC34P49427 236 aaPredicted RBP9.08□□□□□ -0.96
SMG5-204ENST00000476954 LINC01547P58512 204 aaPredicted RBP9.08□□□□□ -0.96
SMG5-204ENST00000476954 FAM162BQ5T6X4 162 aa9.08□□□□□ -0.96
SMG5-204ENST00000476954 WFDC1Q9HC57 220 aa9.08□□□□□ -0.96
SMG5-204ENST00000476954 BCL2P10415 239 aa9.07□□□□□ -0.96
SMG5-204ENST00000476954 RPL13AP40429 203 aaKnown RBP9.07□□□□□ -0.96
SMG5-204ENST00000476954 SYCNQ0VAF6 134 aa9.07□□□□□ -0.96
SMG5-204ENST00000476954 HSPB11Q9Y547 144 aa9.07□□□□□ -0.96
SMG5-204ENST00000476954 M0QY20 66 aa9.06□□□□□ -0.96
SMG5-204ENST00000476954 PLA2G10O15496 165 aa9.06□□□□□ -0.96
SMG5-204ENST00000476954 NKX2-5P52952 324 aaPredicted RBP9.06□□□□□ -0.96
SMG5-204ENST00000476954 ZNF674Q2M3X9 581 aa9.06□□□□□ -0.96
SMG5-204ENST00000476954 CNPY1Q3B7I2 92 aa9.06□□□□□ -0.96
SMG5-204ENST00000476954 RAB24Q969Q5 203 aa9.06□□□□□ -0.96
SMG5-204ENST00000476954 RETNLBQ9BQ08 111 aa9.06□□□□□ -0.96
SMG5-204ENST00000476954 NUDT15Q9NV35 164 aa9.06□□□□□ -0.96
SMG5-204ENST00000476954 A0A087WZ39 114 aa9.05□□□□□ -0.96
SMG5-204ENST00000476954 LOC107984640A0A0U1RRK4 108 aa9.05□□□□□ -0.96
SMG5-204ENST00000476954 UBE2L6O14933 153 aa9.05□□□□□ -0.96
SMG5-204ENST00000476954 EIF5AP63241 154 aaKnown RBP9.05□□□□□ -0.96
SMG5-204ENST00000476954 COX8CQ7Z4L0 72 aa9.05□□□□□ -0.96
SMG5-204ENST00000476954 SSBP4Q9BWG4 385 aaPredicted RBP9.05□□□□□ -0.96
SMG5-204ENST00000476954 CDIP1Q9H305 208 aa9.05□□□□□ -0.96
SMG5-204ENST00000476954 KRTAP9-7A8MTY7 169 aa9.04□□□□□ -0.96
SMG5-204ENST00000476954 PEX7O00628 323 aa9.04□□□□□ -0.96
SMG5-204ENST00000476954 IL7P13232 177 aa9.03□□□□□ -0.96
SMG5-204ENST00000476954 XCL1P47992 114 aa9.03□□□□□ -0.96
SMG5-204ENST00000476954 SUMO4Q6EEV6 95 aa9.03□□□□□ -0.96
SMG5-204ENST00000476954 IGHV1-58A0A0C4DH39 117 aa9.02□□□□□ -0.97
SMG5-204ENST00000476954 A6NHS1 94 aa9.02□□□□□ -0.97
SMG5-204ENST00000476954 MGPP08493 103 aa9.02□□□□□ -0.97
SMG5-204ENST00000476954 UBE2G2P60604 165 aa9.02□□□□□ -0.97
SMG5-204ENST00000476954 SPANXN1Q5VSR9 72 aa9.02□□□□□ -0.97
SMG5-204ENST00000476954 TMEM167BQ9NRX6 74 aa9.02□□□□□ -0.97
SMG5-204ENST00000476954 SNAI2O43623 268 aa9.01□□□□□ -0.97
SMG5-204ENST00000476954 NOL3O60936 208 aaKnown RBP9.01□□□□□ -0.97
SMG5-204ENST00000476954 ZFP30Q9Y2G7 519 aa9.01□□□□□ -0.97
SMG5-204ENST00000476954 A0A1W2PRE2 83 aa9□□□□□ -0.97
SMG5-204ENST00000476954 ZNF561-AS1K7EIQ3 104 aa9□□□□□ -0.97
SMG5-204ENST00000476954 LYRM1O43325 122 aa9□□□□□ -0.97
SMG5-204ENST00000476954 H2AFB2P0C5Z0 115 aa9□□□□□ -0.97
SMG5-204ENST00000476954 SMIM17P0DL12 118 aa9□□□□□ -0.97
SMG5-204ENST00000476954 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.99□□□□□ -0.97
SMG5-204ENST00000476954 CCL25O15444 150 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms