RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 S100A5P33763 92 aa7.28□□□□□ -1.24
LSM2-209ENST00000470083 GFRA4Q9GZZ7 299 aa7.28□□□□□ -1.24
LSM2-209ENST00000470083 RBM38Q9H0Z9 239 aaKnown RBP7.28□□□□□ -1.24
LSM2-209ENST00000470083 EPDR1Q9UM22 224 aa7.28□□□□□ -1.24
LSM2-209ENST00000470083 ARL2-SNX15V9GYD0 113 aa7.28□□□□□ -1.24
LSM2-209ENST00000470083 IGLV4-60A0A075B6I1 120 aa7.27□□□□□ -1.25
LSM2-209ENST00000470083 IGHV1-24A0A0C4DH33 117 aa7.27□□□□□ -1.25
LSM2-209ENST00000470083 ARL14EPLP0DKL9 152 aa7.27□□□□□ -1.25
LSM2-209ENST00000470083 RAB2AP61019 212 aa7.27□□□□□ -1.25
LSM2-209ENST00000470083 SEC22CQ9BRL7 303 aa7.27□□□□□ -1.25
LSM2-209ENST00000470083 TRAV6A0A075B6T7 132 aa7.26□□□□□ -1.25
LSM2-209ENST00000470083 GVQW2A0A096LPI5 108 aaPredicted RBP7.26□□□□□ -1.25
LSM2-209ENST00000470083 GAGE12HA6NDE8 117 aa7.26□□□□□ -1.25
LSM2-209ENST00000470083 HMGB3O15347 200 aaKnown RBP7.26□□□□□ -1.25
LSM2-209ENST00000470083 SUMO1P63165 101 aaKnown RBP7.26□□□□□ -1.25
LSM2-209ENST00000470083 FER1L6-AS1Q8NA97 138 aa7.26□□□□□ -1.25
LSM2-209ENST00000470083 INO80EQ8NBZ0 244 aaPredicted RBP7.26□□□□□ -1.25
LSM2-209ENST00000470083 IGLV1-50A0A075B6I6 118 aa7.25□□□□□ -1.25
LSM2-209ENST00000470083 TRAV34A0A0B4J273 112 aa7.25□□□□□ -1.25
LSM2-209ENST00000470083 NOL3O60936 208 aaKnown RBP7.25□□□□□ -1.25
LSM2-209ENST00000470083 CRIP1P50238 77 aa7.25□□□□□ -1.25
LSM2-209ENST00000470083 SUN5Q8TC36 379 aa7.25□□□□□ -1.25
LSM2-209ENST00000470083 SCGB1C1Q8TD33 95 aa7.25□□□□□ -1.25
LSM2-209ENST00000470083 DIRC1Q969H9 104 aa7.25□□□□□ -1.25
LSM2-209ENST00000470083 AQP10Q96PS8 301 aa7.25□□□□□ -1.25
LSM2-209ENST00000470083 SH2D1AO60880 128 aa7.24□□□□□ -1.25
LSM2-209ENST00000470083 MT-ND6P03923 174 aa7.24□□□□□ -1.25
LSM2-209ENST00000470083 SULT1A2P50226 295 aa7.24□□□□□ -1.25
LSM2-209ENST00000470083 MUC17Q685J3 4493 aa7.24□□□□□ -1.25
LSM2-209ENST00000470083 TMSB15BA0A087X1C1 80 aa7.23□□□□□ -1.25
LSM2-209ENST00000470083 STAG3L2P0CL84 134 aa7.23□□□□□ -1.25
LSM2-209ENST00000470083 STAG3L3P0CL85 134 aa7.23□□□□□ -1.25
LSM2-209ENST00000470083 GCHFRP30047 84 aa7.23□□□□□ -1.25
LSM2-209ENST00000470083 FAM162BQ5T6X4 162 aa7.23□□□□□ -1.25
LSM2-209ENST00000470083 Q86TA4 180 aa7.23□□□□□ -1.25
LSM2-209ENST00000470083 TMEM243Q9BU79 118 aa7.23□□□□□ -1.25
LSM2-209ENST00000470083 F5H697 171 aa7.22□□□□□ -1.25
LSM2-209ENST00000470083 H0YIZ8 118 aa7.22□□□□□ -1.25
LSM2-209ENST00000470083 C1orf137Q5JT78 98 aa7.22□□□□□ -1.25
LSM2-209ENST00000470083 COX8CQ7Z4L0 72 aa7.22□□□□□ -1.25
LSM2-209ENST00000470083 NUDT15Q9NV35 164 aa7.22□□□□□ -1.25
LSM2-209ENST00000470083 LOC100996750A0A140TA64 210 aa7.21□□□□□ -1.26
LSM2-209ENST00000470083 H0Y9J4 135 aa7.21□□□□□ -1.26
LSM2-209ENST00000470083 CDC34P49427 236 aaPredicted RBP7.21□□□□□ -1.26
LSM2-209ENST00000470083 PTTG1IPP53801 180 aa7.21□□□□□ -1.26
LSM2-209ENST00000470083 LRRC37A5PQ49AS3 106 aa7.21□□□□□ -1.26
LSM2-209ENST00000470083 OR10AG1Q8NH19 301 aa7.21□□□□□ -1.26
LSM2-209ENST00000470083 CARD19Q96LW7 228 aa7.21□□□□□ -1.26
LSM2-209ENST00000470083 SDHCQ99643 169 aaPredicted RBP7.21□□□□□ -1.26
LSM2-209ENST00000470083 KRTAP4-6Q9BYQ5 205 aa7.21□□□□□ -1.26
LSM2-209ENST00000470083 HSPB11Q9Y547 144 aa7.21□□□□□ -1.26
LSM2-209ENST00000470083 TRAV1-1A0A0B4J248 108 aa7.2□□□□□ -1.26
LSM2-209ENST00000470083 KRTAP1-4P0C5Y4 121 aa7.2□□□□□ -1.26
LSM2-209ENST00000470083 ZNF674Q2M3X9 581 aa7.2□□□□□ -1.26
LSM2-209ENST00000470083 CHCHD10Q8WYQ3 142 aaPredicted RBP7.2□□□□□ -1.26
LSM2-209ENST00000470083 ZNF471Q9BX82 626 aaPredicted RBP7.2□□□□□ -1.26
LSM2-209ENST00000470083 TMEM167BQ9NRX6 74 aa7.2□□□□□ -1.26
LSM2-209ENST00000470083 A0A1W2PNN7 141 aa7.19□□□□□ -1.26
LSM2-209ENST00000470083 IGLV7-43P04211 117 aa7.19□□□□□ -1.26
LSM2-209ENST00000470083 IL7P13232 177 aa7.19□□□□□ -1.26
LSM2-209ENST00000470083 RPL13AP40429 203 aaKnown RBP7.19□□□□□ -1.26
LSM2-209ENST00000470083 AMTP48728 403 aa7.19□□□□□ -1.26
LSM2-209ENST00000470083 RAB24Q969Q5 203 aa7.19□□□□□ -1.26
LSM2-209ENST00000470083 SMIM3Q9BZL3 60 aa7.19□□□□□ -1.26
LSM2-209ENST00000470083 ZFP30Q9Y2G7 519 aa7.19□□□□□ -1.26
LSM2-209ENST00000470083 IGKV3OR2-268A0A0C4DH90 116 aa7.18□□□□□ -1.26
LSM2-209ENST00000470083 A0A1W2PRE2 83 aa7.18□□□□□ -1.26
LSM2-209ENST00000470083 PEX7O00628 323 aa7.18□□□□□ -1.26
LSM2-209ENST00000470083 UBE2L6O14933 153 aa7.18□□□□□ -1.26
LSM2-209ENST00000470083 PLA2G10O15496 165 aa7.18□□□□□ -1.26
LSM2-209ENST00000470083 LYRM1O43325 122 aa7.18□□□□□ -1.26
LSM2-209ENST00000470083 UBE2D1P51668 147 aa7.18□□□□□ -1.26
LSM2-209ENST00000470083 A6NHS1 94 aa7.17□□□□□ -1.26
LSM2-209ENST00000470083 SIX6O95475 246 aa7.17□□□□□ -1.26
LSM2-209ENST00000470083 CXorf1O96002 111 aa7.17□□□□□ -1.26
LSM2-209ENST00000470083 RPL12P30050 165 aaKnown RBP7.17□□□□□ -1.26
LSM2-209ENST00000470083 FOXI1Q12951 378 aa7.17□□□□□ -1.26
LSM2-209ENST00000470083 GAGE2BQ13066 116 aa7.17□□□□□ -1.26
LSM2-209ENST00000470083 LINC00526Q96FQ7 95 aa7.17□□□□□ -1.26
LSM2-209ENST00000470083 MED28Q9H204 178 aa7.17□□□□□ -1.26
LSM2-209ENST00000470083 WFDC1Q9HC57 220 aa7.17□□□□□ -1.26
LSM2-209ENST00000470083 LOC107984640A0A0U1RRK4 108 aa7.16□□□□□ -1.26
LSM2-209ENST00000470083 M0QY20 66 aa7.16□□□□□ -1.26
LSM2-209ENST00000470083 SNAI2O43623 268 aa7.16□□□□□ -1.26
LSM2-209ENST00000470083 H2AFB2P0C5Z0 115 aa7.16□□□□□ -1.26
LSM2-209ENST00000470083 SMIM17P0DL12 118 aa7.16□□□□□ -1.26
LSM2-209ENST00000470083 CYCSP99999 105 aaKnown RBP7.16□□□□□ -1.26
LSM2-209ENST00000470083 SYCNQ0VAF6 134 aa7.16□□□□□ -1.26
LSM2-209ENST00000470083 C9orf116Q5BN46 136 aaPredicted RBP7.16□□□□□ -1.26
LSM2-209ENST00000470083 SPANXN1Q5VSR9 72 aa7.16□□□□□ -1.26
LSM2-209ENST00000470083 HIST1H2BAQ96A08 127 aa7.16□□□□□ -1.26
LSM2-209ENST00000470083 PGLYRP4Q96LB8 373 aa7.16□□□□□ -1.26
LSM2-209ENST00000470083 IGHV1-58A0A0C4DH39 117 aa7.15□□□□□ -1.26
LSM2-209ENST00000470083 MUC21A0A140T8X8 626 aa7.15□□□□□ -1.26
LSM2-209ENST00000470083 CXCL1P09341 107 aa7.15□□□□□ -1.26
LSM2-209ENST00000470083 PHF5AQ7RTV0 110 aaKnown RBP7.15□□□□□ -1.26
LSM2-209ENST00000470083 AP1S3Q96PC3 154 aa7.15□□□□□ -1.26
LSM2-209ENST00000470083 SSBP4Q9BWG4 385 aaPredicted RBP7.15□□□□□ -1.26
LSM2-209ENST00000470083 GHRHP01286 108 aa7.14□□□□□ -1.27
LSM2-209ENST00000470083 OR5AL1P0C617 328 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms