RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 FLG2Q5D862 2391 aaPredicted RBP8.64□□□□□ -1.03
CPSF4-210ENST00000469897 CRPP02741 224 aa8.64□□□□□ -1.03
CPSF4-210ENST00000469897 CXCL1P09341 107 aa8.64□□□□□ -1.03
CPSF4-210ENST00000469897 OR5AL1P0C617 328 aa8.64□□□□□ -1.03
CPSF4-210ENST00000469897 CCL20P78556 96 aa8.64□□□□□ -1.03
CPSF4-210ENST00000469897 NTM-AS1Q6ZSK4 140 aa8.64□□□□□ -1.03
CPSF4-210ENST00000469897 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.64□□□□□ -1.03
CPSF4-210ENST00000469897 KIF25-AS1Q9Y6Z4 181 aa8.64□□□□□ -1.03
CPSF4-210ENST00000469897 HMSDA8MTL9 139 aa8.63□□□□□ -1.03
CPSF4-210ENST00000469897 ZNF345Q14585 488 aa8.63□□□□□ -1.03
CPSF4-210ENST00000469897 DERL1Q9BUN8 251 aa8.63□□□□□ -1.03
CPSF4-210ENST00000469897 A0A0D9SG52 128 aa8.62□□□□□ -1.03
CPSF4-210ENST00000469897 USP17L23D6RBM5 183 aa8.62□□□□□ -1.03
CPSF4-210ENST00000469897 SMIM17P0DL12 118 aa8.62□□□□□ -1.03
CPSF4-210ENST00000469897 GZMBP10144 247 aa8.62□□□□□ -1.03
CPSF4-210ENST00000469897 RPL35P42766 123 aaKnown RBP8.62□□□□□ -1.03
CPSF4-210ENST00000469897 KRTAP10-4P60372 401 aaPredicted RBP8.62□□□□□ -1.03
CPSF4-210ENST00000469897 GAGE6Q13070 117 aa8.62□□□□□ -1.03
CPSF4-210ENST00000469897 C14orf177Q52M58 125 aa8.62□□□□□ -1.03
CPSF4-210ENST00000469897 KANTRA0A1W2PQU2 76 aa8.61□□□□□ -1.03
CPSF4-210ENST00000469897 BCL2L11O43521 198 aa8.61□□□□□ -1.03
CPSF4-210ENST00000469897 HLA-DQA1P01909 254 aa8.61□□□□□ -1.03
CPSF4-210ENST00000469897 RBX1P62877 108 aa8.61□□□□□ -1.03
CPSF4-210ENST00000469897 TPPP3Q9BW30 176 aa8.61□□□□□ -1.03
CPSF4-210ENST00000469897 GNG13Q9P2W3 67 aa8.61□□□□□ -1.03
CPSF4-210ENST00000469897 PRSS1P07477 247 aa8.6□□□□□ -1.03
CPSF4-210ENST00000469897 MIAQ16674 131 aa8.6□□□□□ -1.03
CPSF4-210ENST00000469897 TMEM97Q5BJF2 176 aa8.6□□□□□ -1.03
CPSF4-210ENST00000469897 CLPSL2Q6UWE3 100 aa8.6□□□□□ -1.03
CPSF4-210ENST00000469897 LINC00269Q8N2A0 174 aa8.6□□□□□ -1.03
CPSF4-210ENST00000469897 VAX2Q9UIW0 290 aa8.6□□□□□ -1.03
CPSF4-210ENST00000469897 RAB19A4D1S5 217 aa8.59□□□□□ -1.03
CPSF4-210ENST00000469897 IGLV2-8P01709 118 aa8.59□□□□□ -1.03
CPSF4-210ENST00000469897 MGPP08493 103 aa8.59□□□□□ -1.03
CPSF4-210ENST00000469897 PKIAP61925 76 aa8.59□□□□□ -1.03
CPSF4-210ENST00000469897 EIF5AP63241 154 aaKnown RBP8.59□□□□□ -1.03
CPSF4-210ENST00000469897 DAZAP1Q96EP5 407 aaKnown RBP8.59□□□□□ -1.03
CPSF4-210ENST00000469897 PRR34Q9NV39 138 aa8.59□□□□□ -1.03
CPSF4-210ENST00000469897 TRBV25-1A0A075B6N4 114 aa8.58□□□□□ -1.04
CPSF4-210ENST00000469897 M0QY20 66 aa8.58□□□□□ -1.04
CPSF4-210ENST00000469897 DGAT2L7PQ6IED9 249 aa8.58□□□□□ -1.04
CPSF4-210ENST00000469897 KRTAP26-1Q6PEX3 210 aa8.58□□□□□ -1.04
CPSF4-210ENST00000469897 OR2D3Q8NGH3 330 aa8.58□□□□□ -1.04
CPSF4-210ENST00000469897 AP1S3Q96PC3 154 aa8.58□□□□□ -1.04
CPSF4-210ENST00000469897 IGLC6P0CF74 106 aa8.57□□□□□ -1.04
CPSF4-210ENST00000469897 CENPWQ5EE01 88 aa8.57□□□□□ -1.04
CPSF4-210ENST00000469897 C9orf163Q8N9P6 203 aa8.57□□□□□ -1.04
CPSF4-210ENST00000469897 FER1L6-AS1Q8NA97 138 aa8.57□□□□□ -1.04
CPSF4-210ENST00000469897 C11orf52Q96A22 123 aa8.57□□□□□ -1.04
CPSF4-210ENST00000469897 MANBALQ9NQG1 85 aa8.57□□□□□ -1.04
CPSF4-210ENST00000469897 IGLV10-54A0A075B6I4 117 aa8.56□□□□□ -1.04
CPSF4-210ENST00000469897 TRAV1-1A0A0B4J248 108 aa8.56□□□□□ -1.04
CPSF4-210ENST00000469897 IGHV1-24A0A0C4DH33 117 aa8.56□□□□□ -1.04
CPSF4-210ENST00000469897 C19orf71A6NCJ1 209 aa8.56□□□□□ -1.04
CPSF4-210ENST00000469897 NKX2-5P52952 324 aaPredicted RBP8.56□□□□□ -1.04
CPSF4-210ENST00000469897 RPS20P60866 119 aaKnown RBP8.56□□□□□ -1.04
CPSF4-210ENST00000469897 REG3AQ06141 175 aa8.56□□□□□ -1.04
CPSF4-210ENST00000469897 IQCJQ1A5X6 159 aa8.56□□□□□ -1.04
CPSF4-210ENST00000469897 SUMO4Q6EEV6 95 aa8.56□□□□□ -1.04
CPSF4-210ENST00000469897 H7C1H1 209 aa8.55□□□□□ -1.04
CPSF4-210ENST00000469897 GNG4P50150 75 aa8.55□□□□□ -1.04
CPSF4-210ENST00000469897 RAB5CP51148 216 aa8.55□□□□□ -1.04
CPSF4-210ENST00000469897 CACNG7P62955 275 aa8.55□□□□□ -1.04
CPSF4-210ENST00000469897 SDIM1Q6ZPB5 146 aa8.55□□□□□ -1.04
CPSF4-210ENST00000469897 F2Z2F3 143 aa8.54□□□□□ -1.04
CPSF4-210ENST00000469897 PANO1I0J062 215 aa8.54□□□□□ -1.04
CPSF4-210ENST00000469897 OXTP01178 125 aa8.54□□□□□ -1.04
CPSF4-210ENST00000469897 NTF3P20783 257 aa8.54□□□□□ -1.04
CPSF4-210ENST00000469897 RPL37AP61513 92 aaKnown RBP8.54□□□□□ -1.04
CPSF4-210ENST00000469897 RASL11AQ6T310 242 aa8.54□□□□□ -1.04
CPSF4-210ENST00000469897 LYZL1Q6UWQ5 148 aa8.54□□□□□ -1.04
CPSF4-210ENST00000469897 C20orf203Q8NBC4 194 aa8.54□□□□□ -1.04
CPSF4-210ENST00000469897 MED9Q9NWA0 146 aa8.54□□□□□ -1.04
CPSF4-210ENST00000469897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.54□□□□□ -1.04
CPSF4-210ENST00000469897 IGLV4-60A0A075B6I1 120 aa8.53□□□□□ -1.04
CPSF4-210ENST00000469897 IFNA1P01562 189 aa8.53□□□□□ -1.04
CPSF4-210ENST00000469897 P01737 135 aa8.53□□□□□ -1.04
CPSF4-210ENST00000469897 SERTAD4-AS1Q5TG53 156 aa8.53□□□□□ -1.04
CPSF4-210ENST00000469897 CLRN3Q8NCR9 226 aa8.53□□□□□ -1.04
CPSF4-210ENST00000469897 GFRA4Q9GZZ7 299 aa8.53□□□□□ -1.04
CPSF4-210ENST00000469897 NIT2Q9NQR4 276 aa8.53□□□□□ -1.04
CPSF4-210ENST00000469897 TRBV20OR9-2A0A075B6H5 130 aa8.52□□□□□ -1.05
CPSF4-210ENST00000469897 A0A1B0GUV1 79 aa8.52□□□□□ -1.05
CPSF4-210ENST00000469897 XKRY2A2RUG3 117 aa8.52□□□□□ -1.05
CPSF4-210ENST00000469897 TEX46H3BTG2 121 aa8.52□□□□□ -1.05
CPSF4-210ENST00000469897 PDE6DO43924 150 aa8.52□□□□□ -1.05
CPSF4-210ENST00000469897 HNRNPA3P51991 378 aaKnown RBP8.52□□□□□ -1.05
CPSF4-210ENST00000469897 MEF2BQ02080 365 aaPredicted RBP8.52□□□□□ -1.05
CPSF4-210ENST00000469897 EIF5AL1Q6IS14 154 aaKnown RBP8.52□□□□□ -1.05
CPSF4-210ENST00000469897 C9orf62Q8N4C0 152 aa8.52□□□□□ -1.05
CPSF4-210ENST00000469897 NUDT10Q8NFP7 164 aa8.52□□□□□ -1.05
CPSF4-210ENST00000469897 DPH3Q96FX2 82 aa8.52□□□□□ -1.05
CPSF4-210ENST00000469897 NUDT11Q96G61 164 aa8.52□□□□□ -1.05
CPSF4-210ENST00000469897 TMEM243Q9BU79 118 aa8.52□□□□□ -1.05
CPSF4-210ENST00000469897 LRP1Q07954 4544 aaKnown RBP8.52□□□□□ -1.05
CPSF4-210ENST00000469897 TRAV8-4A0A0B4J246 113 aa8.51□□□□□ -1.05
CPSF4-210ENST00000469897 hDV102S1A0JD36 115 aa8.51□□□□□ -1.05
CPSF4-210ENST00000469897 TRGC1P0CF51 173 aa8.51□□□□□ -1.05
CPSF4-210ENST00000469897 SULT1A2P50226 295 aa8.51□□□□□ -1.05
CPSF4-210ENST00000469897 SMIM12Q96EX1 92 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms