RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZNF256Q9Y2P7 627 aaPredicted RBP9.43□□□□□ -0.9
USP11-206ENST00000469080 TRAV26-2A0A0B4J265 109 aa9.43□□□□□ -0.9
USP11-206ENST00000469080 ATP5LO75964 103 aa9.43□□□□□ -0.9
USP11-206ENST00000469080 RNASE4P34096 147 aaKnown RBP9.43□□□□□ -0.9
USP11-206ENST00000469080 FAM74A4Q5TZK3 123 aa9.43□□□□□ -0.9
USP11-206ENST00000469080 C8orf31Q8N9H6 132 aa9.43□□□□□ -0.9
USP11-206ENST00000469080 ODF3Q96PU9 254 aa9.43□□□□□ -0.9
USP11-206ENST00000469080 TRGV11A0A075B6L2 103 aa9.43□□□□□ -0.9
USP11-206ENST00000469080 WI2-2373I1.2A0A1W2PRP0 233 aa9.43□□□□□ -0.9
USP11-206ENST00000469080 ODF3BA8MYP8 253 aa9.43□□□□□ -0.9
USP11-206ENST00000469080 ORMDL3Q8N138 153 aa9.43□□□□□ -0.9
USP11-206ENST00000469080 J3QLI3 93 aa9.42□□□□□ -0.9
USP11-206ENST00000469080 TEX49A0A1B0GTD5 131 aa9.42□□□□□ -0.9
USP11-206ENST00000469080 F8WDY8 70 aa9.42□□□□□ -0.9
USP11-206ENST00000469080 ZNF80P51504 273 aaPredicted RBP9.42□□□□□ -0.9
USP11-206ENST00000469080 TRPT1Q86TN4 253 aaKnown RBP9.42□□□□□ -0.9
USP11-206ENST00000469080 MRPL35Q9NZE8 188 aaKnown RBP9.42□□□□□ -0.9
USP11-206ENST00000469080 TRBV7-3A0A075B6L6 115 aa9.41□□□□□ -0.9
USP11-206ENST00000469080 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.41□□□□□ -0.9
USP11-206ENST00000469080 C3orf22Q8N5N4 141 aa9.41□□□□□ -0.9
USP11-206ENST00000469080 RNF5Q99942 180 aa9.41□□□□□ -0.9
USP11-206ENST00000469080 C10orf105Q8TEF2 133 aa9.41□□□□□ -0.9
USP11-206ENST00000469080 Q96MF0 132 aa9.41□□□□□ -0.9
USP11-206ENST00000469080 B4DSR2 109 aa9.41□□□□□ -0.9
USP11-206ENST00000469080 EGR2P11161 476 aaPredicted RBP9.41□□□□□ -0.9
USP11-206ENST00000469080 CRIP2P52943 208 aaPredicted RBP9.41□□□□□ -0.9
USP11-206ENST00000469080 SYNJ2BPP57105 145 aa9.41□□□□□ -0.9
USP11-206ENST00000469080 PSMG4Q5JS54 123 aa9.41□□□□□ -0.9
USP11-206ENST00000469080 NPBQ8NG41 125 aa9.4□□□□□ -0.9
USP11-206ENST00000469080 CCDC140Q96MF4 163 aa9.4□□□□□ -0.9
USP11-206ENST00000469080 TRAV12-2A0A075B6T6 113 aa9.4□□□□□ -0.9
USP11-206ENST00000469080 MRAPQ8TCY5 172 aa9.4□□□□□ -0.9
USP11-206ENST00000469080 PRSS22Q9GZN4 317 aa9.4□□□□□ -0.9
USP11-206ENST00000469080 NBPF19A0A087WUL8 3843 aa9.4□□□□□ -0.9
USP11-206ENST00000469080 SEC61GP60059 68 aa9.4□□□□□ -0.91
USP11-206ENST00000469080 C5orf56Q8N8D9 126 aa9.4□□□□□ -0.91
USP11-206ENST00000469080 CT83Q5H943 113 aa9.39□□□□□ -0.91
USP11-206ENST00000469080 CEMP1Q6PRD7 247 aaPredicted RBP9.39□□□□□ -0.91
USP11-206ENST00000469080 GFRA4Q9GZZ7 299 aa9.39□□□□□ -0.91
USP11-206ENST00000469080 ZNF492Q9P255 531 aa9.39□□□□□ -0.91
USP11-206ENST00000469080 CRIP1P50238 77 aa9.39□□□□□ -0.91
USP11-206ENST00000469080 HERVK_113P61574 105 aa9.39□□□□□ -0.91
USP11-206ENST00000469080 Q1RN00 199 aa9.39□□□□□ -0.91
USP11-206ENST00000469080 FAM110DQ8TAY7 271 aaPredicted RBP9.39□□□□□ -0.91
USP11-206ENST00000469080 RHPN1-AS1Q9BWJ2 59 aa9.39□□□□□ -0.91
USP11-206ENST00000469080 PRR25Q96S07 402 aa9.39□□□□□ -0.91
USP11-206ENST00000469080 C19orf71A6NCJ1 209 aa9.38□□□□□ -0.91
USP11-206ENST00000469080 F8W735 103 aaPredicted RBP9.38□□□□□ -0.91
USP11-206ENST00000469080 AGPAT4-IT1Q9H0P7 198 aa9.38□□□□□ -0.91
USP11-206ENST00000469080 UNC79Q9P2D8 2635 aa9.38□□□□□ -0.91
USP11-206ENST00000469080 SETXQ7Z333 2677 aaKnown RBP9.38□□□□□ -0.91
USP11-206ENST00000469080 FSTL3O95633 263 aa9.37□□□□□ -0.91
USP11-206ENST00000469080 BAALCQ8WXS3 180 aa9.37□□□□□ -0.91
USP11-206ENST00000469080 SMAD5-AS1Q9Y6J3 95 aa9.37□□□□□ -0.91
USP11-206ENST00000469080 UQCRQO14949 82 aa9.37□□□□□ -0.91
USP11-206ENST00000469080 GAS8-AS1O95177 125 aa9.37□□□□□ -0.91
USP11-206ENST00000469080 RPL35AP18077 110 aaKnown RBP9.37□□□□□ -0.91
USP11-206ENST00000469080 UBE2D3P61077 147 aa9.37□□□□□ -0.91
USP11-206ENST00000469080 UBE2D2P62837 147 aa9.37□□□□□ -0.91
USP11-206ENST00000469080 IGHV3-73A0A0B4J1V6 119 aa9.37□□□□□ -0.91
USP11-206ENST00000469080 A0A1B0GX51 115 aa9.37□□□□□ -0.91
USP11-206ENST00000469080 TRAV12-3A0A0B4J271 114 aa9.36□□□□□ -0.91
USP11-206ENST00000469080 hADV29S1A0JD25 119 aa9.36□□□□□ -0.91
USP11-206ENST00000469080 ZNF815PA8K554 130 aa9.36□□□□□ -0.91
USP11-206ENST00000469080 MRPL51Q4U2R6 128 aaKnown RBP9.36□□□□□ -0.91
USP11-206ENST00000469080 PIFOQ8TCI5 191 aa9.36□□□□□ -0.91
USP11-206ENST00000469080 NXT2Q9NPJ8 142 aaKnown RBP9.36□□□□□ -0.91
USP11-206ENST00000469080 BUB3O43684 328 aa9.36□□□□□ -0.91
USP11-206ENST00000469080 DSCR8Q96T75 97 aa9.36□□□□□ -0.91
USP11-206ENST00000469080 TINCRA0A1B0GVN0 87 aa9.36□□□□□ -0.91
USP11-206ENST00000469080 MRPS12O15235 138 aaKnown RBP9.36□□□□□ -0.91
USP11-206ENST00000469080 F8P00451 2351 aa9.36□□□□□ -0.91
USP11-206ENST00000469080 MYOZ3Q8TDC0 251 aa9.36□□□□□ -0.91
USP11-206ENST00000469080 MLST8Q9BVC4 326 aa9.36□□□□□ -0.91
USP11-206ENST00000469080 PHLDA3Q9Y5J5 127 aa9.36□□□□□ -0.91
USP11-206ENST00000469080 PRM2P04554 102 aa9.35□□□□□ -0.91
USP11-206ENST00000469080 H3BMM0 161 aa9.35□□□□□ -0.91
USP11-206ENST00000469080 FAM104BQ5XKR9 115 aa9.35□□□□□ -0.91
USP11-206ENST00000469080 UBE2WQ96B02 151 aa9.35□□□□□ -0.91
USP11-206ENST00000469080 C14orf178Q8N769 122 aaPredicted RBP9.35□□□□□ -0.91
USP11-206ENST00000469080 INS-IGF2F8WCM5 200 aa9.34□□□□□ -0.91
USP11-206ENST00000469080 IGLV2-11P01706 119 aa9.34□□□□□ -0.91
USP11-206ENST00000469080 IGHG4P01861 327 aa9.34□□□□□ -0.91
USP11-206ENST00000469080 A0A087WWL8 130 aa9.34□□□□□ -0.91
USP11-206ENST00000469080 GNRH2O43555 120 aa9.34□□□□□ -0.91
USP11-206ENST00000469080 LGALS1P09382 135 aaKnown RBP9.34□□□□□ -0.91
USP11-206ENST00000469080 MYCNOSP40205 109 aa9.34□□□□□ -0.91
USP11-206ENST00000469080 C18orf65Q6ZTR6 163 aa9.34□□□□□ -0.91
USP11-206ENST00000469080 SBSPONQ8IVN8 264 aa9.34□□□□□ -0.91
USP11-206ENST00000469080 KLK9Q9UKQ9 250 aa9.34□□□□□ -0.91
USP11-206ENST00000469080 NDUFA11Q86Y39 141 aa9.33□□□□□ -0.92
USP11-206ENST00000469080 ZNF843Q8N446 348 aa9.33□□□□□ -0.92
USP11-206ENST00000469080 TRACP01848 142 aa9.33□□□□□ -0.92
USP11-206ENST00000469080 ZMAT4Q9H898 229 aa9.33□□□□□ -0.92
USP11-206ENST00000469080 LINC00526Q96FQ7 95 aa9.33□□□□□ -0.92
USP11-206ENST00000469080 M0R2P5 195 aa9.32□□□□□ -0.92
USP11-206ENST00000469080 ZNF415Q09FC8 603 aa9.32□□□□□ -0.92
USP11-206ENST00000469080 SPINK13Q1W4C9 94 aa9.32□□□□□ -0.92
USP11-206ENST00000469080 RNF152Q8N8N0 203 aa9.32□□□□□ -0.92
USP11-206ENST00000469080 WFDC11Q8NEX6 87 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms