RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 OR10AG1Q8NH19 301 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 RNASE8Q8TDE3 154 aaKnown RBP2.51□□□□□ -2.01
SCFD1-204ENST00000463622 SFRP2Q96HF1 295 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 PRAC1Q96KF2 57 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 YPEL4Q96NS1 127 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 JPT2Q9H910 190 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 GSN-AS1Q9NRJ2 163 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 LENEPQ9Y5L5 61 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 DNAH5Q8TE73 4624 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 IGHV1OR15-1A0A075B7D0 117 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 TRAV21A0A0B4J279 112 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 TRBV7-9A0A0J9YWB2 115 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 FABP5P3A8MUU1 101 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 SPINK4O60575 86 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 ORM1P02763 201 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 EMP1P54849 157 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 CMC4P56277 68 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-204ENST00000463622 SSTP61278 116 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 UBE2V1Q13404 147 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 NDUFA5Q16718 116 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 SAPCD1Q5SSQ6 148 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 IBA57Q5T440 356 aaKnown RBP2.5□□□□□ -2.01
SCFD1-204ENST00000463622 FAM162BQ5T6X4 162 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 MORN3Q6PF18 240 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-204ENST00000463622 FAM231DQ6ZW35 169 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 OR11H2Q8NH07 326 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 C9orf85Q96MD7 179 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 LINC01587Q99440 93 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 NIPSNAP3BQ9BS92 247 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 NDFIP1Q9BT67 221 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 C11orf68Q9H3H3 251 aaKnown RBP2.5□□□□□ -2.01
SCFD1-204ENST00000463622 RPP21Q9H633 154 aaKnown RBP2.5□□□□□ -2.01
SCFD1-204ENST00000463622 OSTCQ9NRP0 149 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 MRPL16Q9NX20 251 aaKnown RBP2.5□□□□□ -2.01
SCFD1-204ENST00000463622 Q9UF83 564 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 TIMM8BQ9Y5J9 83 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-204ENST00000463622 LY96Q9Y6Y9 160 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 SRRM2Q9UQ35 2752 aaKnown RBP2.5□□□□□ -2.01
SCFD1-204ENST00000463622 B4DEV8 164 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 IGLL5B9A064 214 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 H7BYZ3 331 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 GATCO43716 136 aaKnown RBP2.5□□□□□ -2.01
SCFD1-204ENST00000463622 P01737 135 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 S100A9P06702 114 aaKnown RBP2.5□□□□□ -2.01
SCFD1-204ENST00000463622 CXCL1P09341 107 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 ARMS2P0C7Q2 107 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 TSPOP30536 169 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 DSCR10P59022 87 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 TDRG1Q3Y452 100 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 Q6ZTI0 123 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 OR10G8Q8NGN5 311 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 SMIM12Q96EX1 92 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 OPRPNQ99935 248 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-204ENST00000463622 PYGO2Q9BRQ0 406 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 SAMD10Q9BYL1 202 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 URGCP-MRPS24S4R325 110 aa2.5□□□□□ -2.01
SCFD1-204ENST00000463622 TGIF2-C20orf24A0A0A6YYL0 155 aa2.49□□□□□ -2.01
SCFD1-204ENST00000463622 SMIM27A0A1W2PRY6 76 aa2.49□□□□□ -2.01
SCFD1-204ENST00000463622 NDUFAF8A1L188 74 aa2.49□□□□□ -2.01
SCFD1-204ENST00000463622 TMEM189A5PLL7 270 aa2.49□□□□□ -2.01
SCFD1-204ENST00000463622 FBLL1A6NHQ2 334 aaKnown RBP2.49□□□□□ -2.01
SCFD1-204ENST00000463622 HIGD1CA8MV81 97 aa2.49□□□□□ -2.01
SCFD1-204ENST00000463622 SNAI2O43623 268 aa2.49□□□□□ -2.01
SCFD1-204ENST00000463622 LYZL1Q6UWQ5 148 aa2.49□□□□□ -2.01
SCFD1-204ENST00000463622 NUP35Q8NFH5 326 aa2.49□□□□□ -2.01
SCFD1-204ENST00000463622 PGLYRP4Q96LB8 373 aa2.49□□□□□ -2.01
SCFD1-204ENST00000463622 LINC00467Q9BRT7 94 aa2.49□□□□□ -2.01
SCFD1-204ENST00000463622 TMEM208Q9BTX3 173 aa2.49□□□□□ -2.01
SCFD1-204ENST00000463622 TPPP3Q9BW30 176 aa2.49□□□□□ -2.01
SCFD1-204ENST00000463622 NOP10Q9NPE3 64 aaKnown RBP2.49□□□□□ -2.01
SCFD1-204ENST00000463622 RPS10P5Q9NQ39 176 aa2.49□□□□□ -2.01
SCFD1-204ENST00000463622 IL36BQ9NZH7 164 aa2.49□□□□□ -2.01
SCFD1-204ENST00000463622 GOLT1BQ9Y3E0 138 aa2.49□□□□□ -2.01
SCFD1-204ENST00000463622 IGHV4-4A0A075B6R2 117 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 A0A1B0GXF2 115 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 C16orf90A8MZG2 172 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 H7C423 109 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 M0R2N4 97 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 M0R381 172 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 NXPH4O95158 308 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 IGHV3-53P01767 116 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 P0DMU3 169 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 FAM231AP0DMU4 169 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 FAM231CP0DMU5 169 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 CTRLP40313 264 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 LINC00315P59091 139 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 NUTF2P61970 127 aaKnown RBP2.48□□□□□ -2.01
SCFD1-204ENST00000463622 PNRC1Q12796 327 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-204ENST00000463622 RRN3P1Q2M238 152 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 DNLZQ5SXM8 178 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 ADAMTSL4-AS1Q5T5F5 129 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 FAM222AQ5U5X8 452 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 MRPL54Q6P161 138 aaKnown RBP2.48□□□□□ -2.01
SCFD1-204ENST00000463622 FAM159AQ6UWV7 190 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 FER1L6-AS1Q8NA97 138 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 TSKUQ8WUA8 353 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 A0A087WWC5 75 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 IGHV3-73A0A0B4J1V6 119 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 TRAV10A0A0B4J240 114 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms