RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 GZMBP10144 247 aa12.48□□□□□ -0.41
VARS-220ENST00000461874 MEF2BQ02080 365 aaPredicted RBP12.48□□□□□ -0.41
VARS-220ENST00000461874 ATRAIDQ6UW56 229 aa12.48□□□□□ -0.41
VARS-220ENST00000461874 DAZAP1Q96EP5 407 aaKnown RBP12.48□□□□□ -0.41
VARS-220ENST00000461874 SMIM12Q96EX1 92 aa12.48□□□□□ -0.41
VARS-220ENST00000461874 AP1S3Q96PC3 154 aa12.48□□□□□ -0.41
VARS-220ENST00000461874 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.47□□□□□ -0.41
VARS-220ENST00000461874 C19orf71A6NCJ1 209 aa12.47□□□□□ -0.41
VARS-220ENST00000461874 RBFOX3A6NFN3 312 aa12.47□□□□□ -0.41
VARS-220ENST00000461874 PDE6DO43924 150 aa12.47□□□□□ -0.41
VARS-220ENST00000461874 GNG4P50150 75 aa12.47□□□□□ -0.41
VARS-220ENST00000461874 RPS20P60866 119 aaKnown RBP12.47□□□□□ -0.41
VARS-220ENST00000461874 SLC51BQ86UW2 128 aa12.47□□□□□ -0.41
VARS-220ENST00000461874 Q8N976 141 aa12.47□□□□□ -0.41
VARS-220ENST00000461874 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.47□□□□□ -0.41
VARS-220ENST00000461874 OR2D3Q8NGH3 330 aa12.47□□□□□ -0.41
VARS-220ENST00000461874 FAM229AH3BQW9 127 aa12.46□□□□□ -0.41
VARS-220ENST00000461874 IFNA1P01562 189 aa12.46□□□□□ -0.41
VARS-220ENST00000461874 Q0VG73 95 aa12.46□□□□□ -0.41
VARS-220ENST00000461874 FER1L6-AS1Q8NA97 138 aa12.46□□□□□ -0.41
VARS-220ENST00000461874 TPPP3Q9BW30 176 aa12.46□□□□□ -0.41
VARS-220ENST00000461874 MED9Q9NWA0 146 aa12.46□□□□□ -0.41
VARS-220ENST00000461874 VAX2Q9UIW0 290 aa12.46□□□□□ -0.41
VARS-220ENST00000461874 SRRM2Q9UQ35 2752 aaKnown RBP12.45□□□□□ -0.42
VARS-220ENST00000461874 BCL2P10415 239 aa12.45□□□□□ -0.42
VARS-220ENST00000461874 Q6ZSA8 131 aa12.45□□□□□ -0.42
VARS-220ENST00000461874 TRBV20OR9-2A0A075B6H5 130 aa12.44□□□□□ -0.42
VARS-220ENST00000461874 CACNG7P62955 275 aa12.44□□□□□ -0.42
VARS-220ENST00000461874 MPV17L2Q567V2 206 aa12.44□□□□□ -0.42
VARS-220ENST00000461874 TMEM97Q5BJF2 176 aa12.44□□□□□ -0.42
VARS-220ENST00000461874 ENHOQ6UWT2 76 aa12.44□□□□□ -0.42
VARS-220ENST00000461874 NTM-AS1Q6ZSK4 140 aa12.44□□□□□ -0.42
VARS-220ENST00000461874 C15orf54Q8N8G6 183 aa12.44□□□□□ -0.42
VARS-220ENST00000461874 CHCHD5Q9BSY4 110 aa12.44□□□□□ -0.42
VARS-220ENST00000461874 P01737 135 aa12.43□□□□□ -0.42
VARS-220ENST00000461874 PKIAP61925 76 aa12.43□□□□□ -0.42
VARS-220ENST00000461874 BIN3Q9NQY0 253 aa12.43□□□□□ -0.42
VARS-220ENST00000461874 FLG2Q5D862 2391 aaPredicted RBP12.43□□□□□ -0.42
VARS-220ENST00000461874 XKRY2A2RUG3 117 aa12.42□□□□□ -0.42
VARS-220ENST00000461874 F2Z2F3 143 aa12.42□□□□□ -0.42
VARS-220ENST00000461874 M0QY20 66 aa12.42□□□□□ -0.42
VARS-220ENST00000461874 MGPP08493 103 aa12.42□□□□□ -0.42
VARS-220ENST00000461874 Q6ZNX1 250 aa12.42□□□□□ -0.42
VARS-220ENST00000461874 C1orf43Q9BWL3 253 aa12.42□□□□□ -0.42
VARS-220ENST00000461874 DMBT1Q9UGM3 2413 aaPredicted RBP12.42□□□□□ -0.42
VARS-220ENST00000461874 CRPP02741 224 aa12.41□□□□□ -0.42
VARS-220ENST00000461874 ANGP03950 147 aaKnown RBP12.41□□□□□ -0.42
VARS-220ENST00000461874 TAGLN2P37802 199 aaKnown RBP12.41□□□□□ -0.42
VARS-220ENST00000461874 LINC01620Q4KN68 170 aa12.41□□□□□ -0.42
VARS-220ENST00000461874 SUMO4Q6EEV6 95 aa12.41□□□□□ -0.42
VARS-220ENST00000461874 H7C1H1 209 aa12.4□□□□□ -0.42
VARS-220ENST00000461874 LYZL1Q6UWQ5 148 aa12.4□□□□□ -0.42
VARS-220ENST00000461874 HERC1Q15751 4861 aa12.4□□□□□ -0.42
VARS-220ENST00000461874 MYCBP2O75592 4640 aa12.39□□□□□ -0.43
VARS-220ENST00000461874 TRBV25-1A0A075B6N4 114 aa12.39□□□□□ -0.43
VARS-220ENST00000461874 C9orf62Q8N4C0 152 aa12.39□□□□□ -0.43
VARS-220ENST00000461874 NUDT10Q8NFP7 164 aa12.39□□□□□ -0.43
VARS-220ENST00000461874 NUDT11Q96G61 164 aa12.39□□□□□ -0.43
VARS-220ENST00000461874 TRGC1P0CF51 173 aa12.38□□□□□ -0.43
VARS-220ENST00000461874 RBX1P62877 108 aa12.38□□□□□ -0.43
VARS-220ENST00000461874 GAGE6Q13070 117 aa12.38□□□□□ -0.43
VARS-220ENST00000461874 MIAQ16674 131 aa12.38□□□□□ -0.43
VARS-220ENST00000461874 IQCJQ1A5X6 159 aa12.38□□□□□ -0.43
VARS-220ENST00000461874 NTF3P20783 257 aa12.37□□□□□ -0.43
VARS-220ENST00000461874 C14orf177Q52M58 125 aa12.37□□□□□ -0.43
VARS-220ENST00000461874 WDR73Q6P4I2 378 aa12.37□□□□□ -0.43
VARS-220ENST00000461874 PRR34Q9NV39 138 aa12.37□□□□□ -0.43
VARS-220ENST00000461874 IGHV1-24A0A0C4DH33 117 aa12.36□□□□□ -0.43
VARS-220ENST00000461874 CTRLP40313 264 aa12.36□□□□□ -0.43
VARS-220ENST00000461874 NKX2-5P52952 324 aaPredicted RBP12.36□□□□□ -0.43
VARS-220ENST00000461874 RASL11AQ6T310 242 aa12.36□□□□□ -0.43
VARS-220ENST00000461874 AKAP14Q86UN6 197 aa12.36□□□□□ -0.43
VARS-220ENST00000461874 OCC1Q8TAD7 63 aa12.36□□□□□ -0.43
VARS-220ENST00000461874 DPH3P1Q9H4G8 78 aa12.36□□□□□ -0.43
VARS-220ENST00000461874 K7EN84 100 aa12.35□□□□□ -0.43
VARS-220ENST00000461874 LINC00269Q8N2A0 174 aa12.35□□□□□ -0.43
VARS-220ENST00000461874 CNFNQ9BYD5 112 aa12.35□□□□□ -0.43
VARS-220ENST00000461874 RPP21Q9H633 154 aaKnown RBP12.35□□□□□ -0.43
VARS-220ENST00000461874 SCXQ7RTU7 201 aa12.34□□□□□ -0.43
VARS-220ENST00000461874 RNASE7Q9H1E1 156 aaKnown RBP12.34□□□□□ -0.43
VARS-220ENST00000461874 NIT2Q9NQR4 276 aa12.34□□□□□ -0.43
VARS-220ENST00000461874 USP17L23D6RBM5 183 aa12.33□□□□□ -0.44
VARS-220ENST00000461874 HLA-DQA1P01909 254 aa12.33□□□□□ -0.44
VARS-220ENST00000461874 TWIST1Q15672 202 aa12.33□□□□□ -0.44
VARS-220ENST00000461874 CLPSL2Q6UWE3 100 aa12.33□□□□□ -0.44
VARS-220ENST00000461874 LINC00528Q8N1L1 170 aa12.33□□□□□ -0.44
VARS-220ENST00000461874 CHAC1Q9BUX1 264 aa12.33□□□□□ -0.44
VARS-220ENST00000461874 PLA2G1BP04054 148 aaKnown RBP12.32□□□□□ -0.44
VARS-220ENST00000461874 BLOC1S1P78537 153 aa12.32□□□□□ -0.44
VARS-220ENST00000461874 KRTAP26-1Q6PEX3 210 aa12.32□□□□□ -0.44
VARS-220ENST00000461874 ALKAL2Q6UX46 152 aa12.32□□□□□ -0.44
VARS-220ENST00000461874 PGLYRP4Q96LB8 373 aa12.32□□□□□ -0.44
VARS-220ENST00000461874 TMEM243Q9BU79 118 aa12.32□□□□□ -0.44
VARS-220ENST00000461874 hCG_2014768A0A024R1R8 64 aa12.31□□□□□ -0.44
VARS-220ENST00000461874 TMEM250H0YL14 139 aa12.31□□□□□ -0.44
VARS-220ENST00000461874 LYPD6BQ8NI32 183 aa12.31□□□□□ -0.44
VARS-220ENST00000461874 A0A1B0GUV1 79 aa12.3□□□□□ -0.44
VARS-220ENST00000461874 PRSS1P07477 247 aa12.3□□□□□ -0.44
VARS-220ENST00000461874 REG3AQ06141 175 aa12.3□□□□□ -0.44
VARS-220ENST00000461874 C20orf203Q8NBC4 194 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms