RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 ZNF479Q96JC4 524 aa10.79□□□□□ -0.68
TMEM39A-203ENST00000461654 C20orf78Q9BR46 151 aa10.79□□□□□ -0.68
TMEM39A-203ENST00000461654 C11orf68Q9H3H3 251 aaKnown RBP10.79□□□□□ -0.68
TMEM39A-203ENST00000461654 LOC389332A0A1B0GUA5 103 aa10.78□□□□□ -0.68
TMEM39A-203ENST00000461654 M0QY20 66 aa10.78□□□□□ -0.68
TMEM39A-203ENST00000461654 GATA1P15976 413 aaPredicted RBP10.78□□□□□ -0.68
TMEM39A-203ENST00000461654 PMCHP20382 165 aa10.78□□□□□ -0.68
TMEM39A-203ENST00000461654 COA6Q5JTJ3 125 aaKnown RBP10.78□□□□□ -0.68
TMEM39A-203ENST00000461654 FA2HQ7L5A8 372 aa10.78□□□□□ -0.68
TMEM39A-203ENST00000461654 NRACQ8N912 160 aa10.78□□□□□ -0.68
TMEM39A-203ENST00000461654 ST20Q9HBF5 79 aa10.78□□□□□ -0.68
TMEM39A-203ENST00000461654 NIT2Q9NQR4 276 aa10.78□□□□□ -0.68
TMEM39A-203ENST00000461654 GAS8-AS1O95177 125 aa10.77□□□□□ -0.69
TMEM39A-203ENST00000461654 SNRPEP62304 92 aaKnown RBP10.77□□□□□ -0.69
TMEM39A-203ENST00000461654 RNASEKQ6P5S7 137 aaKnown RBP10.77□□□□□ -0.69
TMEM39A-203ENST00000461654 NIT1Q86X76 327 aa10.77□□□□□ -0.69
TMEM39A-203ENST00000461654 RPL39LQ96EH5 51 aaKnown RBP10.77□□□□□ -0.69
TMEM39A-203ENST00000461654 NXT2Q9NPJ8 142 aaKnown RBP10.77□□□□□ -0.69
TMEM39A-203ENST00000461654 SUMO2P61956 95 aaKnown RBP10.76□□□□□ -0.69
TMEM39A-203ENST00000461654 CHCHD1Q96BP2 118 aaKnown RBP10.76□□□□□ -0.69
TMEM39A-203ENST00000461654 DNAJC30Q96LL9 226 aa10.76□□□□□ -0.69
TMEM39A-203ENST00000461654 TNFRSF18Q9Y5U5 241 aa10.76□□□□□ -0.69
TMEM39A-203ENST00000461654 DNAH7Q8WXX0 4024 aa10.75□□□□□ -0.69
TMEM39A-203ENST00000461654 TRBV6-5A0A0K0K1A5 114 aa10.75□□□□□ -0.69
TMEM39A-203ENST00000461654 C5orf52A6NGY3 159 aa10.75□□□□□ -0.69
TMEM39A-203ENST00000461654 HSBP1O75506 76 aa10.75□□□□□ -0.69
TMEM39A-203ENST00000461654 SERF1AO75920 110 aa10.75□□□□□ -0.69
TMEM39A-203ENST00000461654 ATP5G1P05496 136 aa10.75□□□□□ -0.69
TMEM39A-203ENST00000461654 LINC00614P0C842 121 aa10.75□□□□□ -0.69
TMEM39A-203ENST00000461654 S100A2P29034 98 aa10.75□□□□□ -0.69
TMEM39A-203ENST00000461654 A0A0J9YWU9 116 aa10.74□□□□□ -0.69
TMEM39A-203ENST00000461654 TRBV10-1A0A0K0K1A3 114 aa10.74□□□□□ -0.69
TMEM39A-203ENST00000461654 TRBV6-4A0A1B0GX49 114 aa10.74□□□□□ -0.69
TMEM39A-203ENST00000461654 PRSS47A8MTI9 375 aa10.74□□□□□ -0.69
TMEM39A-203ENST00000461654 K7EQD1 137 aa10.74□□□□□ -0.69
TMEM39A-203ENST00000461654 HOXA5P20719 270 aa10.74□□□□□ -0.69
TMEM39A-203ENST00000461654 IFI27P40305 119 aaPredicted RBP10.74□□□□□ -0.69
TMEM39A-203ENST00000461654 Q6ZSN1 163 aa10.74□□□□□ -0.69
TMEM39A-203ENST00000461654 Q8N8P6 123 aa10.74□□□□□ -0.69
TMEM39A-203ENST00000461654 PRADC1Q9BSG0 188 aa10.74□□□□□ -0.69
TMEM39A-203ENST00000461654 SMIM2Q9BVW6 85 aa10.74□□□□□ -0.69
TMEM39A-203ENST00000461654 CELA1Q9UNI1 258 aa10.74□□□□□ -0.69
TMEM39A-203ENST00000461654 TENM2Q9NT68 2774 aa10.73□□□□□ -0.69
TMEM39A-203ENST00000461654 VCYO14598 125 aa10.73□□□□□ -0.69
TMEM39A-203ENST00000461654 RPL32P62910 135 aaKnown RBP10.73□□□□□ -0.69
TMEM39A-203ENST00000461654 FHL2Q14192 279 aa10.73□□□□□ -0.69
TMEM39A-203ENST00000461654 RHOHQ15669 191 aa10.73□□□□□ -0.69
TMEM39A-203ENST00000461654 AP5S1Q9NUS5 200 aa10.73□□□□□ -0.69
TMEM39A-203ENST00000461654 HHLA3Q9XRX5 114 aa10.73□□□□□ -0.69
TMEM39A-203ENST00000461654 SDHAF1A6NFY7 115 aa10.72□□□□□ -0.69
TMEM39A-203ENST00000461654 RPL36AP83881 106 aaKnown RBP10.72□□□□□ -0.69
TMEM39A-203ENST00000461654 SLC25A29Q8N8R3 303 aa10.72□□□□□ -0.69
TMEM39A-203ENST00000461654 RPL36ALQ969Q0 106 aaKnown RBP10.72□□□□□ -0.69
TMEM39A-203ENST00000461654 KIR2DL4Q99706 377 aa10.72□□□□□ -0.69
TMEM39A-203ENST00000461654 K7EMI3 77 aa10.71□□□□□ -0.69
TMEM39A-203ENST00000461654 TCAPO15273 167 aa10.71□□□□□ -0.69
TMEM39A-203ENST00000461654 ESDP10768 282 aa10.71□□□□□ -0.69
TMEM39A-203ENST00000461654 PDZD11Q5EBL8 140 aa10.71□□□□□ -0.69
TMEM39A-203ENST00000461654 HIST3H2BBQ8N257 126 aa10.71□□□□□ -0.69
TMEM39A-203ENST00000461654 C11orf45Q8TAV5 145 aa10.71□□□□□ -0.69
TMEM39A-203ENST00000461654 TMEM18Q96B42 140 aa10.71□□□□□ -0.69
TMEM39A-203ENST00000461654 TMEM70Q9BUB7 260 aa10.71□□□□□ -0.69
TMEM39A-203ENST00000461654 PRO0255Q9UI72 69 aa10.71□□□□□ -0.69
TMEM39A-203ENST00000461654 STARD9Q9P2P6 4700 aa10.7□□□□□ -0.7
TMEM39A-203ENST00000461654 DYNC2H1Q8NCM8 4307 aaKnown RBP10.7□□□□□ -0.7
TMEM39A-203ENST00000461654 F5H768 121 aa10.7□□□□□ -0.7
TMEM39A-203ENST00000461654 P0DMU3 169 aa10.7□□□□□ -0.7
TMEM39A-203ENST00000461654 FAM231AP0DMU4 169 aa10.7□□□□□ -0.7
TMEM39A-203ENST00000461654 FAM231CP0DMU5 169 aa10.7□□□□□ -0.7
TMEM39A-203ENST00000461654 HTN3P15516 51 aa10.7□□□□□ -0.7
TMEM39A-203ENST00000461654 NEXN-AS1Q8NBZ9 246 aa10.7□□□□□ -0.7
TMEM39A-203ENST00000461654 RYR2Q92736 4967 aa10.7□□□□□ -0.7
TMEM39A-203ENST00000461654 CSMD3Q7Z407 3707 aa10.7□□□□□ -0.7
TMEM39A-203ENST00000461654 TRBV7-3A0A075B6L6 115 aa10.69□□□□□ -0.7
TMEM39A-203ENST00000461654 TRBV27A0A0K0K1C4 114 aa10.69□□□□□ -0.7
TMEM39A-203ENST00000461654 I3L3M4 83 aa10.69□□□□□ -0.7
TMEM39A-203ENST00000461654 FCER1GP30273 86 aa10.69□□□□□ -0.7
TMEM39A-203ENST00000461654 AMTP48728 403 aa10.69□□□□□ -0.7
TMEM39A-203ENST00000461654 POLR2KP53803 58 aaKnown RBP10.69□□□□□ -0.7
TMEM39A-203ENST00000461654 LINC00310P59036 64 aa10.69□□□□□ -0.7
TMEM39A-203ENST00000461654 LAGE3Q14657 143 aa10.69□□□□□ -0.7
TMEM39A-203ENST00000461654 C12orf74Q32Q52 190 aa10.69□□□□□ -0.7
TMEM39A-203ENST00000461654 ORMDL2Q53FV1 153 aa10.69□□□□□ -0.7
TMEM39A-203ENST00000461654 ZNRF2Q8NHG8 242 aa10.69□□□□□ -0.7
TMEM39A-203ENST00000461654 GAGE12JA6NER3 117 aa10.68□□□□□ -0.7
TMEM39A-203ENST00000461654 PAX4O43316 350 aa10.68□□□□□ -0.7
TMEM39A-203ENST00000461654 NUPR1O60356 82 aa10.68□□□□□ -0.7
TMEM39A-203ENST00000461654 G0S2P27469 103 aa10.68□□□□□ -0.7
TMEM39A-203ENST00000461654 CRYBA4P53673 196 aa10.68□□□□□ -0.7
TMEM39A-203ENST00000461654 GAGE1Q13065 139 aa10.68□□□□□ -0.7
TMEM39A-203ENST00000461654 GAGE4Q13068 117 aa10.68□□□□□ -0.7
TMEM39A-203ENST00000461654 GAGE5Q13069 117 aa10.68□□□□□ -0.7
TMEM39A-203ENST00000461654 GAGE13Q4V321 117 aa10.68□□□□□ -0.7
TMEM39A-203ENST00000461654 URB1-AS1Q96HZ7 61 aa10.68□□□□□ -0.7
TMEM39A-203ENST00000461654 SACSQ9NZJ4 4579 aa10.68□□□□□ -0.7
TMEM39A-203ENST00000461654 IGLV2-18A0A075B6J9 118 aa10.67□□□□□ -0.7
TMEM39A-203ENST00000461654 LINC01546A6NGU7 62 aa10.67□□□□□ -0.7
TMEM39A-203ENST00000461654 NUPR2A6NF83 97 aa10.66□□□□□ -0.7
TMEM39A-203ENST00000461654 NUDT3O95989 172 aa10.66□□□□□ -0.7
TMEM39A-203ENST00000461654 FABP4P15090 132 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms