RNA–Protein interactions for RNA: ENST00000459711.5

CHRD-207, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 503 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-207ENST00000459711 ZFP30Q9Y2G7 519 aa12.46□□□□□ -0.41
CHRD-207ENST00000459711 TRAV8-4A0A0B4J246 113 aa12.45□□□□□ -0.42
CHRD-207ENST00000459711 TRBV6-1A0A0K0K1D8 114 aa12.45□□□□□ -0.42
CHRD-207ENST00000459711 P01737 135 aa12.45□□□□□ -0.42
CHRD-207ENST00000459711 ATP6V0CP27449 155 aa12.45□□□□□ -0.42
CHRD-207ENST00000459711 HIST1H2BAQ96A08 127 aa12.45□□□□□ -0.42
CHRD-207ENST00000459711 DERL1Q9BUN8 251 aa12.45□□□□□ -0.42
CHRD-207ENST00000459711 ACTR3CQ9C0K3 210 aaPredicted RBP12.45□□□□□ -0.42
CHRD-207ENST00000459711 SERF2P84101 59 aa12.44□□□□□ -0.42
CHRD-207ENST00000459711 IQCJQ1A5X6 159 aa12.44□□□□□ -0.42
CHRD-207ENST00000459711 REG3GQ6UW15 175 aa12.44□□□□□ -0.42
CHRD-207ENST00000459711 INMT-MINDY4F8WBC2 141 aa12.43□□□□□ -0.42
CHRD-207ENST00000459711 GZMBP10144 247 aa12.43□□□□□ -0.42
CHRD-207ENST00000459711 UBE2G2P60604 165 aa12.43□□□□□ -0.42
CHRD-207ENST00000459711 COX6A2Q02221 97 aa12.43□□□□□ -0.42
CHRD-207ENST00000459711 SPINK6Q6UWN8 80 aa12.43□□□□□ -0.42
CHRD-207ENST00000459711 C20orf203Q8NBC4 194 aa12.43□□□□□ -0.42
CHRD-207ENST00000459711 MAJINQ3KP22 176 aa12.42□□□□□ -0.42
CHRD-207ENST00000459711 OR10AG1Q8NH19 301 aa12.42□□□□□ -0.42
CHRD-207ENST00000459711 TNFSF18Q9UNG2 199 aa12.42□□□□□ -0.42
CHRD-207ENST00000459711 IGHV1-24A0A0C4DH33 117 aa12.41□□□□□ -0.42
CHRD-207ENST00000459711 FMC1Q96HJ9 113 aa12.41□□□□□ -0.42
CHRD-207ENST00000459711 NKX6-2Q9C056 277 aaPredicted RBP12.41□□□□□ -0.42
CHRD-207ENST00000459711 MUC21A0A0G2JKD1 596 aa12.4□□□□□ -0.42
CHRD-207ENST00000459711 FAM74A7A6NL05 159 aa12.4□□□□□ -0.42
CHRD-207ENST00000459711 SSNA1O43805 119 aa12.4□□□□□ -0.42
CHRD-207ENST00000459711 NDUFS6O75380 124 aaKnown RBP12.4□□□□□ -0.42
CHRD-207ENST00000459711 ZNF471Q9BX82 626 aaPredicted RBP12.4□□□□□ -0.42
CHRD-207ENST00000459711 IGKV2-24A0A0C4DH68 120 aa12.39□□□□□ -0.43
CHRD-207ENST00000459711 F5H697 171 aa12.39□□□□□ -0.43
CHRD-207ENST00000459711 RAB5CP51148 216 aa12.39□□□□□ -0.43
CHRD-207ENST00000459711 UBE2G1P62253 170 aa12.39□□□□□ -0.43
CHRD-207ENST00000459711 STPG4Q8N801 248 aa12.39□□□□□ -0.43
CHRD-207ENST00000459711 C15orf56Q8N910 161 aa12.39□□□□□ -0.43
CHRD-207ENST00000459711 PRSS3P2Q8NHM4 247 aa12.39□□□□□ -0.43
CHRD-207ENST00000459711 GFRA4Q9GZZ7 299 aa12.39□□□□□ -0.43
CHRD-207ENST00000459711 IGLV4-60A0A075B6I1 120 aa12.38□□□□□ -0.43
CHRD-207ENST00000459711 A0A1B0GUV1 79 aa12.38□□□□□ -0.43
CHRD-207ENST00000459711 LTAP01374 205 aa12.38□□□□□ -0.43
CHRD-207ENST00000459711 RPS10P46783 165 aaKnown RBP12.38□□□□□ -0.43
CHRD-207ENST00000459711 ZNF726P1Q15940 193 aa12.38□□□□□ -0.43
CHRD-207ENST00000459711 LYPD6BQ8NI32 183 aa12.38□□□□□ -0.43
CHRD-207ENST00000459711 SNAI2O43623 268 aa12.37□□□□□ -0.43
CHRD-207ENST00000459711 CXCL1P09341 107 aa12.37□□□□□ -0.43
CHRD-207ENST00000459711 SRSF9Q13242 221 aaKnown RBP eCLIP12.37□□□□□ -0.438e-9■■□□□ 13.5
CHRD-207ENST00000459711 MARVELD1Q9BSK0 173 aa12.37□□□□□ -0.43
CHRD-207ENST00000459711 CTXND1A0A1B0GTU2 59 aa12.36□□□□□ -0.43
CHRD-207ENST00000459711 A6NHS1 94 aa12.36□□□□□ -0.43
CHRD-207ENST00000459711 SSBP4Q9BWG4 385 aaPredicted RBP12.36□□□□□ -0.43
CHRD-207ENST00000459711 SPANXN1Q5VSR9 72 aa12.35□□□□□ -0.43
CHRD-207ENST00000459711 AQP10Q96PS8 301 aa12.35□□□□□ -0.43
CHRD-207ENST00000459711 KRTAP9-2Q9BYQ4 174 aa12.35□□□□□ -0.43
CHRD-207ENST00000459711 MUC21A0A140T8X8 626 aa12.34□□□□□ -0.43
CHRD-207ENST00000459711 OR5AL1P0C617 328 aa12.34□□□□□ -0.43
CHRD-207ENST00000459711 CFAP161Q6P656 301 aa12.34□□□□□ -0.43
CHRD-207ENST00000459711 MUC2Q02817 5179 aa12.33□□□□□ -0.44
CHRD-207ENST00000459711 A0A096LNI7 61 aa12.33□□□□□ -0.44
CHRD-207ENST00000459711 TMEM243Q9BU79 118 aa12.33□□□□□ -0.44
CHRD-207ENST00000459711 UPK1BO75841 260 aa12.32□□□□□ -0.44
CHRD-207ENST00000459711 SMIM17P0DL12 118 aa12.32□□□□□ -0.44
CHRD-207ENST00000459711 DEFA3P59666 94 aa12.32□□□□□ -0.44
CHRD-207ENST00000459711 HIGD2BQ4VC39 106 aa12.32□□□□□ -0.44
CHRD-207ENST00000459711 LINC00299Q6ZSB3 139 aa12.32□□□□□ -0.44
CHRD-207ENST00000459711 S100ZQ8WXG8 99 aa12.32□□□□□ -0.44
CHRD-207ENST00000459711 AP1S3Q96PC3 154 aa12.32□□□□□ -0.44
CHRD-207ENST00000459711 GAGE12HA6NDE8 117 aa12.31□□□□□ -0.44
CHRD-207ENST00000459711 M0QY20 66 aa12.31□□□□□ -0.44
CHRD-207ENST00000459711 IFITM3Q01628 133 aa12.31□□□□□ -0.44
CHRD-207ENST00000459711 INO80EQ8NBZ0 244 aaPredicted RBP12.31□□□□□ -0.44
CHRD-207ENST00000459711 TCEAL7Q9BRU2 100 aa12.31□□□□□ -0.44
CHRD-207ENST00000459711 AKR1C3P42330 323 aa12.3□□□□□ -0.44
CHRD-207ENST00000459711 SULT1A2P50226 295 aa12.3□□□□□ -0.44
CHRD-207ENST00000459711 SSTP61278 116 aa12.3□□□□□ -0.44
CHRD-207ENST00000459711 Q6ZRP5 223 aa12.3□□□□□ -0.44
CHRD-207ENST00000459711 FHITP49789 147 aa12.29□□□□□ -0.44
CHRD-207ENST00000459711 GVQW2A0A096LPI5 108 aaPredicted RBP12.28□□□□□ -0.44
CHRD-207ENST00000459711 H7C1H1 209 aa12.28□□□□□ -0.44
CHRD-207ENST00000459711 LINC00474Q9P2X8 69 aa12.28□□□□□ -0.44
CHRD-207ENST00000459711 RPL7L1Q6DKI1 246 aaKnown RBP12.27□□□□□ -0.45
CHRD-207ENST00000459711 PGLYRP4Q96LB8 373 aa12.27□□□□□ -0.45
CHRD-207ENST00000459711 NDUFA13Q9P0J0 144 aa12.27□□□□□ -0.45
CHRD-207ENST00000459711 UBE2L6O14933 153 aa12.26□□□□□ -0.45
CHRD-207ENST00000459711 MGPP08493 103 aa12.26□□□□□ -0.45
CHRD-207ENST00000459711 NKX2-5P52952 324 aaPredicted RBP12.26□□□□□ -0.45
CHRD-207ENST00000459711 CST9LP1Q5W188 147 aa12.26□□□□□ -0.45
CHRD-207ENST00000459711 SUMO4Q6EEV6 95 aa12.26□□□□□ -0.45
CHRD-207ENST00000459711 STOML3Q8TAV4 291 aa12.26□□□□□ -0.45
CHRD-207ENST00000459711 MLST8Q9BVC4 326 aa12.26□□□□□ -0.45
CHRD-207ENST00000459711 MAP1LC3B2A6NCE7 125 aa12.25□□□□□ -0.45
CHRD-207ENST00000459711 FAM231BA6NCW3 169 aa12.25□□□□□ -0.45
CHRD-207ENST00000459711 MAP1LC3BQ9GZQ8 125 aa12.25□□□□□ -0.45
CHRD-207ENST00000459711 IGKV3OR2-268A0A0C4DH90 116 aa12.24□□□□□ -0.45
CHRD-207ENST00000459711 PKIGQ9Y2B9 76 aa12.24□□□□□ -0.45
CHRD-207ENST00000459711 S100A9P06702 114 aaKnown RBP12.23□□□□□ -0.45
CHRD-207ENST00000459711 AKR1C8PQ5T2L2 129 aa12.23□□□□□ -0.45
CHRD-207ENST00000459711 CHCHD10Q8WYQ3 142 aaPredicted RBP12.23□□□□□ -0.45
CHRD-207ENST00000459711 BORCS7-ASMTA0A0B4J1R7 106 aa12.22□□□□□ -0.45
CHRD-207ENST00000459711 AMTP48728 403 aa12.22□□□□□ -0.45
CHRD-207ENST00000459711 RASL11AQ6T310 242 aa12.22□□□□□ -0.45
CHRD-207ENST00000459711 BAGE2Q86Y30 109 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms