RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 PEA15Q15121 130 aa15.65■□□□□ 0.1
CBX3-204ENST00000456948 FAM74A3Q4VXF1 159 aa15.65■□□□□ 0.1
CBX3-204ENST00000456948 SPATA12Q7Z6I5 190 aa15.65■□□□□ 0.1
CBX3-204ENST00000456948 NEXN-AS1Q8NBZ9 246 aa15.65■□□□□ 0.1
CBX3-204ENST00000456948 DNAJC30Q96LL9 226 aa15.65■□□□□ 0.1
CBX3-204ENST00000456948 A0A087WX48 190 aa15.64■□□□□ 0.09
CBX3-204ENST00000456948 SRP19P09132 144 aaKnown RBP15.64■□□□□ 0.09
CBX3-204ENST00000456948 ELOBQ15370 118 aa15.64■□□□□ 0.09
CBX3-204ENST00000456948 DAZ4Q86SG3 579 aaKnown RBP15.64■□□□□ 0.09
CBX3-204ENST00000456948 BORCS7Q96B45 105 aa15.64■□□□□ 0.09
CBX3-204ENST00000456948 TM2D2Q9BX73 214 aa15.64■□□□□ 0.09
CBX3-204ENST00000456948 DPH3P1Q9H4G8 78 aa15.64■□□□□ 0.09
CBX3-204ENST00000456948 SMDT1Q9H4I9 107 aa15.64■□□□□ 0.09
CBX3-204ENST00000456948 DAZ3Q9NR90 486 aaKnown RBP15.64■□□□□ 0.09
CBX3-204ENST00000456948 TRAV8-3A0A0A6YYJ7 113 aa15.63■□□□□ 0.09
CBX3-204ENST00000456948 PKIAP61925 76 aa15.63■□□□□ 0.09
CBX3-204ENST00000456948 HERC2O95714 4834 aa15.63■□□□□ 0.09
CBX3-204ENST00000456948 CT83Q5H943 113 aa15.62■□□□□ 0.09
CBX3-204ENST00000456948 C15orf54Q8N8G6 183 aa15.62■□□□□ 0.09
CBX3-204ENST00000456948 CHCHD7Q9BUK0 85 aa15.62■□□□□ 0.09
CBX3-204ENST00000456948 CNFNQ9BYD5 112 aa15.62■□□□□ 0.09
CBX3-204ENST00000456948 PGPEP1Q9NXJ5 209 aa15.62■□□□□ 0.09
CBX3-204ENST00000456948 TRBV6-8A0A0A6YYG3 113 aa15.61■□□□□ 0.09
CBX3-204ENST00000456948 LINC01551Q86U37 167 aa15.61■□□□□ 0.09
CBX3-204ENST00000456948 Q9HAA7 133 aa15.61■□□□□ 0.09
CBX3-204ENST00000456948 KIAA1109Q2LD37 5005 aa15.61■□□□□ 0.09
CBX3-204ENST00000456948 TMEM262E9PQX1 116 aa15.6■□□□□ 0.09
CBX3-204ENST00000456948 TMEM241Q24JQ0 296 aa15.6■□□□□ 0.09
CBX3-204ENST00000456948 NIT1Q86X76 327 aa15.6■□□□□ 0.09
CBX3-204ENST00000456948 M0QY20 66 aa15.59■□□□□ 0.09
CBX3-204ENST00000456948 SUMO4Q6EEV6 95 aa15.59■□□□□ 0.09
CBX3-204ENST00000456948 RASL11AQ6T310 242 aa15.59■□□□□ 0.09
CBX3-204ENST00000456948 RMI2Q96E14 147 aa15.59■□□□□ 0.09
CBX3-204ENST00000456948 OSTCQ9NRP0 149 aa15.59■□□□□ 0.09
CBX3-204ENST00000456948 COX11Q9Y6N1 276 aa15.59■□□□□ 0.09
CBX3-204ENST00000456948 RAB14P61106 215 aa15.58■□□□□ 0.08
CBX3-204ENST00000456948 DNAH11Q96DT5 4516 aa15.57■□□□□ 0.08
CBX3-204ENST00000456948 A0A087WTM6 91 aa15.57■□□□□ 0.08
CBX3-204ENST00000456948 FAM231BA6NCW3 169 aa15.57■□□□□ 0.08
CBX3-204ENST00000456948 GTSF1Q8WW33 167 aa15.57■□□□□ 0.08
CBX3-204ENST00000456948 FRZBQ92765 325 aa15.57■□□□□ 0.08
CBX3-204ENST00000456948 GFRA4Q9GZZ7 299 aa15.57■□□□□ 0.08
CBX3-204ENST00000456948 FOXA3P55318 350 aaPredicted RBP15.56■□□□□ 0.08
CBX3-204ENST00000456948 CDPF1Q6NVV7 123 aa15.56■□□□□ 0.08
CBX3-204ENST00000456948 TSKUQ8WUA8 353 aa15.56■□□□□ 0.08
CBX3-204ENST00000456948 PGLYRP4Q96LB8 373 aa15.56■□□□□ 0.08
CBX3-204ENST00000456948 CHCHD5Q9BSY4 110 aa15.56■□□□□ 0.08
CBX3-204ENST00000456948 NIT2Q9NQR4 276 aa15.56■□□□□ 0.08
CBX3-204ENST00000456948 TRBV25-1A0A075B6N4 114 aa15.55■□□□□ 0.08
CBX3-204ENST00000456948 NAT8Q9UHE5 227 aa15.55■□□□□ 0.08
CBX3-204ENST00000456948 DYNC1H1Q14204 4646 aaKnown RBP15.53■□□□□ 0.08
CBX3-204ENST00000456948 KRTAP10-2P60368 255 aa15.53■□□□□ 0.08
CBX3-204ENST00000456948 Q0VG73 95 aa15.53■□□□□ 0.08
CBX3-204ENST00000456948 KRTAP17-1Q9BYP8 105 aa15.53■□□□□ 0.08
CBX3-204ENST00000456948 KLK12Q9UKR0 248 aa15.53■□□□□ 0.08
CBX3-204ENST00000456948 A0A1B0GUT8 65 aa15.52■□□□□ 0.08
CBX3-204ENST00000456948 ADIRFQ15847 76 aa15.52■□□□□ 0.08
CBX3-204ENST00000456948 Q8N3U1 123 aa15.52■□□□□ 0.08
CBX3-204ENST00000456948 IGHV1-24A0A0C4DH33 117 aa15.51■□□□□ 0.07
CBX3-204ENST00000456948 HIGD1CA8MV81 97 aa15.51■□□□□ 0.07
CBX3-204ENST00000456948 CRPP02741 224 aa15.5■□□□□ 0.07
CBX3-204ENST00000456948 RPL23P62829 140 aaKnown RBP15.5■□□□□ 0.07
CBX3-204ENST00000456948 ISOC2Q96AB3 205 aa15.5■□□□□ 0.07
CBX3-204ENST00000456948 UBE2WQ96B02 151 aa15.49■□□□□ 0.07
CBX3-204ENST00000456948 C9JQL5 133 aa15.48■□□□□ 0.07
CBX3-204ENST00000456948 CDK2AP2O75956 126 aa15.48■□□□□ 0.07
CBX3-204ENST00000456948 RIGQ13278 110 aa15.48■□□□□ 0.07
CBX3-204ENST00000456948 IQCJQ1A5X6 159 aa15.48■□□□□ 0.07
CBX3-204ENST00000456948 IGKV2D-24A0A075B6R9 120 aa15.47■□□□□ 0.07
CBX3-204ENST00000456948 ANGP03950 147 aaKnown RBP15.47■□□□□ 0.07
CBX3-204ENST00000456948 SRSF3P84103 164 aaKnown RBP15.47■□□□□ 0.07
CBX3-204ENST00000456948 COTL1Q14019 142 aa15.47■□□□□ 0.07
CBX3-204ENST00000456948 NTM-AS1Q6ZSK4 140 aa15.47■□□□□ 0.07
CBX3-204ENST00000456948 NTN5Q8WTR8 489 aaPredicted RBP15.47■□□□□ 0.07
CBX3-204ENST00000456948 NAT8BQ9UHF3 227 aa15.47■□□□□ 0.07
CBX3-204ENST00000456948 V9GYV3 84 aa15.47■□□□□ 0.07
CBX3-204ENST00000456948 GATD1Q8NB37 220 aa15.46■□□□□ 0.07
CBX3-204ENST00000456948 TMEM243Q9BU79 118 aa15.46■□□□□ 0.07
CBX3-204ENST00000456948 LRCOL1A6NCL2 159 aa15.45■□□□□ 0.06
CBX3-204ENST00000456948 UBE2L6O14933 153 aa15.45■□□□□ 0.06
CBX3-204ENST00000456948 GAGE6Q13070 117 aa15.45■□□□□ 0.06
CBX3-204ENST00000456948 MPV17L2Q567V2 206 aa15.45■□□□□ 0.06
CBX3-204ENST00000456948 ATRAIDQ6UW56 229 aa15.45■□□□□ 0.06
CBX3-204ENST00000456948 TMEM191AQ9H0A3 160 aa15.45■□□□□ 0.06
CBX3-204ENST00000456948 C1orf43Q9BWL3 253 aa15.44■□□□□ 0.06
CBX3-204ENST00000456948 TRAV26-2A0A0B4J265 109 aa15.43■□□□□ 0.06
CBX3-204ENST00000456948 Q8N814 137 aa15.43■□□□□ 0.06
CBX3-204ENST00000456948 NUP35Q8NFH5 326 aa15.43■□□□□ 0.06
CBX3-204ENST00000456948 IGLV5-52A0A0A0MRZ9 124 aa15.42■□□□□ 0.06
CBX3-204ENST00000456948 AMTP48728 403 aa15.42■□□□□ 0.06
CBX3-204ENST00000456948 RBX1P62877 108 aa15.42■□□□□ 0.06
CBX3-204ENST00000456948 MIAQ16674 131 aa15.42■□□□□ 0.06
CBX3-204ENST00000456948 PCLOQ9Y6V0 5065 aa15.42■□□□□ 0.06
CBX3-204ENST00000456948 NCR2O95944 276 aa15.41■□□□□ 0.06
CBX3-204ENST00000456948 A0A1B0GW15 77 aa15.4■□□□□ 0.06
CBX3-204ENST00000456948 GCSHP23434 173 aa15.4■□□□□ 0.06
CBX3-204ENST00000456948 Q8N976 141 aa15.4■□□□□ 0.06
CBX3-204ENST00000456948 MRAP2Q96G30 205 aa15.4■□□□□ 0.06
CBX3-204ENST00000456948 SMIM27A0A1W2PRY6 76 aa15.39■□□□□ 0.05
CBX3-204ENST00000456948 PPP1R17O96001 155 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms