RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MUC21Q5SSG8 566 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 RASL11AQ6T310 242 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 FAM159AQ6UWV7 190 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 Q6ZUT4 128 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 C1orf158Q8N1D5 194 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 TMEM256Q8N2U0 113 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 TMEM37Q8WXS4 190 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 DERL3Q96Q80 235 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 Q9HAA7 133 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 LY96Q9Y6Y9 160 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 PLAC8L1A1L4L8 177 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 TMEM212A6NML5 194 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 LYRM9A8MSI8 78 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 H3BMM0 161 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 H3BRM9 83 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 TNFSF12O43508 249 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 SRP19P09132 144 aaKnown RBP3.06□□□□□ -1.92
SDCBP-205ENST00000447267 FAUP35544 74 aaKnown RBP3.06□□□□□ -1.92
SDCBP-205ENST00000447267 NDUFV3P56181 108 aaKnown RBP3.06□□□□□ -1.92
SDCBP-205ENST00000447267 SNRPGP62308 76 aaKnown RBP3.06□□□□□ -1.92
SDCBP-205ENST00000447267 SEC11AP67812 179 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 HLA-DRB3P79483 266 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 PNRC1Q12796 327 aaPredicted RBP3.06□□□□□ -1.92
SDCBP-205ENST00000447267 TAL2Q16559 108 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 LRRC37A5PQ49AS3 106 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 ZNF880Q6PDB4 577 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 ZNF322Q6U7Q0 402 aaPredicted RBP3.06□□□□□ -1.92
SDCBP-205ENST00000447267 REG3GQ6UW15 175 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 SLC35F2Q8IXU6 374 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 LRTM2Q8N967 370 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 OR1L8Q8NGR8 309 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 OR10AG1Q8NH19 301 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 VSTM2AQ8TAG5 236 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 MRPL30Q8TCC3 161 aaKnown RBP3.06□□□□□ -1.92
SDCBP-205ENST00000447267 PPP1R1CQ8WVI7 109 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 MBD3L1Q8WWY6 194 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 PELI1Q96FA3 418 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 LINC01587Q99440 93 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 SAMD10Q9BYL1 202 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 VSIRQ9H7M9 311 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 SPANXCQ9NY87 97 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 SPCS1Q9Y6A9 102 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 KIF25-AS1Q9Y6Z4 181 aa3.06□□□□□ -1.92
SDCBP-205ENST00000447267 KMT2DO14686 5537 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 A0A1W2PP11 408 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 DUXBA0A1W2PPF3 345 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 IRGMA1A4Y4 181 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 H7C1H1 209 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 M0R129 80 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 NUPR1O60356 82 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 PFN1P07737 140 aaKnown RBP3.05□□□□□ -1.92
SDCBP-205ENST00000447267 LINC00869P0C866 280 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 SAA1P0DJI8 122 aaPredicted RBP3.05□□□□□ -1.92
SDCBP-205ENST00000447267 HIST1H1DP16402 221 aaKnown RBP3.05□□□□□ -1.92
SDCBP-205ENST00000447267 TMEM50BP56557 158 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 DEFB1P60022 68 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 KRTDAPP60985 99 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 INSL4Q14641 139 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 MSMO1Q15800 293 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 PMCHL1Q16048 86 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 VMA21Q3ZAQ7 101 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 C1orf195Q5TG92 126 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 Q6AWC8 147 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 SFXN4Q6P4A7 337 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 WFDC10BQ8IUB3 73 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 CYB561D1Q8N8Q1 229 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 OR10P1Q8NGE3 313 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 DCANP1Q8TF63 244 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 S100A16Q96FQ6 103 aaKnown RBP3.05□□□□□ -1.92
SDCBP-205ENST00000447267 ZC2HC1AQ96GY0 325 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 AQP10Q96PS8 301 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 PRADC1Q9BSG0 188 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 MANBALQ9NQG1 85 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 EHFQ9NZC4 300 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 IL36GQ9NZH8 169 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 ABRACLQ9P1F3 81 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 PRNDQ9UKY0 176 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 PKIGQ9Y2B9 76 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 TMEM14AQ9Y6G1 99 aa3.05□□□□□ -1.92
SDCBP-205ENST00000447267 IGHV3-21A0A0B4J1V1 117 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 TRAV26-2A0A0B4J265 109 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 A0A1W2PPM0 123 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 C9JCJ5 164 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 TMEM250H0YL14 139 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 H3BUT2 72 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 ISLRO14498 428 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 ZNF253O75346 499 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 ATP5LO75964 103 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 NAPSAO96009 420 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 FABP2P12104 132 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 IFITM1P13164 125 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 GATA2P23769 480 aaPredicted RBP3.04□□□□□ -1.92
SDCBP-205ENST00000447267 ZNF93P35789 620 aaPredicted RBP3.04□□□□□ -1.92
SDCBP-205ENST00000447267 SMIM11AP58511 58 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 TAS2R46P59540 309 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 HSPE1P61604 102 aaKnown RBP3.04□□□□□ -1.92
SDCBP-205ENST00000447267 PSMG4Q5JS54 123 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 RPL7L1Q6DKI1 246 aaKnown RBP3.04□□□□□ -1.92
SDCBP-205ENST00000447267 HRCT1Q6UXD1 115 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 FAM19A1Q7Z5A9 133 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms