RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 RPL35P42766 123 aaKnown RBP13.78□□□□□ -0.2
VSX1-206ENST00000444511 C15orf54Q8N8G6 183 aa13.78□□□□□ -0.2
VSX1-206ENST00000444511 CHCHD5Q9BSY4 110 aa13.78□□□□□ -0.2
VSX1-206ENST00000444511 ANGP03950 147 aaKnown RBP13.77□□□□□ -0.21
VSX1-206ENST00000444511 PKIAP61925 76 aa13.77□□□□□ -0.21
VSX1-206ENST00000444511 MPV17L2Q567V2 206 aa13.77□□□□□ -0.21
VSX1-206ENST00000444511 SCXQ7RTU7 201 aa13.77□□□□□ -0.21
VSX1-206ENST00000444511 J3QL48 77 aa13.76□□□□□ -0.21
VSX1-206ENST00000444511 C14orf177Q52M58 125 aa13.76□□□□□ -0.21
VSX1-206ENST00000444511 ENHOQ6UWT2 76 aa13.76□□□□□ -0.21
VSX1-206ENST00000444511 AP1S3Q96PC3 154 aa13.76□□□□□ -0.21
VSX1-206ENST00000444511 MANBALQ9NQG1 85 aa13.76□□□□□ -0.21
VSX1-206ENST00000444511 GNG13Q9P2W3 67 aa13.76□□□□□ -0.21
VSX1-206ENST00000444511 TMEM97Q5BJF2 176 aa13.75□□□□□ -0.21
VSX1-206ENST00000444511 DERL1Q9BUN8 251 aa13.75□□□□□ -0.21
VSX1-206ENST00000444511 CHAC1Q9BUX1 264 aa13.74□□□□□ -0.21
VSX1-206ENST00000444511 CCL20P78556 96 aa13.73□□□□□ -0.21
VSX1-206ENST00000444511 C11orf52Q96A22 123 aa13.73□□□□□ -0.21
VSX1-206ENST00000444511 TPPP3Q9BW30 176 aa13.73□□□□□ -0.21
VSX1-206ENST00000444511 VAX2Q9UIW0 290 aa13.73□□□□□ -0.21
VSX1-206ENST00000444511 KIF25-AS1Q9Y6Z4 181 aa13.73□□□□□ -0.21
VSX1-206ENST00000444511 CENPWQ5EE01 88 aa13.72□□□□□ -0.21
VSX1-206ENST00000444511 NTM-AS1Q6ZSK4 140 aa13.72□□□□□ -0.21
VSX1-206ENST00000444511 DEFB104AQ8WTQ1 72 aa13.72□□□□□ -0.21
VSX1-206ENST00000444511 DAZAP1Q96EP5 407 aaKnown RBP13.72□□□□□ -0.21
VSX1-206ENST00000444511 HLA-DQA1P01909 254 aa13.71□□□□□ -0.21
VSX1-206ENST00000444511 MGPP08493 103 aa13.71□□□□□ -0.21
VSX1-206ENST00000444511 GZMBP10144 247 aa13.71□□□□□ -0.21
VSX1-206ENST00000444511 MIAQ16674 131 aa13.71□□□□□ -0.21
VSX1-206ENST00000444511 TRBV25-1A0A075B6N4 114 aa13.7□□□□□ -0.22
VSX1-206ENST00000444511 TRAV1-1A0A0B4J248 108 aa13.7□□□□□ -0.22
VSX1-206ENST00000444511 TEX46H3BTG2 121 aa13.7□□□□□ -0.22
VSX1-206ENST00000444511 RAB5CP51148 216 aa13.7□□□□□ -0.22
VSX1-206ENST00000444511 RPS20P60866 119 aaKnown RBP13.7□□□□□ -0.22
VSX1-206ENST00000444511 FER1L6-AS1Q8NA97 138 aa13.7□□□□□ -0.22
VSX1-206ENST00000444511 OR2D3Q8NGH3 330 aa13.7□□□□□ -0.22
VSX1-206ENST00000444511 CIRBP-AS1Q8TBR5 109 aa13.7□□□□□ -0.22
VSX1-206ENST00000444511 USP17L23D6RBM5 183 aa13.69□□□□□ -0.22
VSX1-206ENST00000444511 RBX1P62877 108 aa13.69□□□□□ -0.22
VSX1-206ENST00000444511 GAGE6Q13070 117 aa13.69□□□□□ -0.22
VSX1-206ENST00000444511 EIF5AL1Q6IS14 154 aaKnown RBP13.69□□□□□ -0.22
VSX1-206ENST00000444511 H7C1H1 209 aa13.68□□□□□ -0.22
VSX1-206ENST00000444511 IGLC6P0CF74 106 aa13.68□□□□□ -0.22
VSX1-206ENST00000444511 GNG4P50150 75 aa13.68□□□□□ -0.22
VSX1-206ENST00000444511 CLPSL2Q6UWE3 100 aa13.68□□□□□ -0.22
VSX1-206ENST00000444511 RAB19A4D1S5 217 aa13.67□□□□□ -0.22
VSX1-206ENST00000444511 M0QY20 66 aa13.67□□□□□ -0.22
VSX1-206ENST00000444511 IGLV2-8P01709 118 aa13.67□□□□□ -0.22
VSX1-206ENST00000444511 CACNG7P62955 275 aa13.67□□□□□ -0.22
VSX1-206ENST00000444511 LINC00269Q8N2A0 174 aa13.67□□□□□ -0.22
VSX1-206ENST00000444511 SMIM12Q96EX1 92 aa13.67□□□□□ -0.22
VSX1-206ENST00000444511 PRR34Q9NV39 138 aa13.67□□□□□ -0.22
VSX1-206ENST00000444511 IGHV1-24A0A0C4DH33 117 aa13.66□□□□□ -0.22
VSX1-206ENST00000444511 XKRY2A2RUG3 117 aa13.66□□□□□ -0.22
VSX1-206ENST00000444511 C19orf71A6NCJ1 209 aa13.66□□□□□ -0.22
VSX1-206ENST00000444511 IQCJQ1A5X6 159 aa13.66□□□□□ -0.22
VSX1-206ENST00000444511 SUMO4Q6EEV6 95 aa13.66□□□□□ -0.22
VSX1-206ENST00000444511 KRTAP29-1A8MX34 341 aaPredicted RBP13.65□□□□□ -0.22
VSX1-206ENST00000444511 PDE6DO43924 150 aa13.65□□□□□ -0.22
VSX1-206ENST00000444511 P01737 135 aa13.65□□□□□ -0.22
VSX1-206ENST00000444511 MEF2BQ02080 365 aaPredicted RBP13.65□□□□□ -0.22
VSX1-206ENST00000444511 F2Z2F3 143 aa13.64□□□□□ -0.23
VSX1-206ENST00000444511 IFNA1P01562 189 aa13.64□□□□□ -0.23
VSX1-206ENST00000444511 SULT1A2P50226 295 aa13.64□□□□□ -0.23
VSX1-206ENST00000444511 MED9Q9NWA0 146 aa13.64□□□□□ -0.23
VSX1-206ENST00000444511 PRSS1P07477 247 aa13.63□□□□□ -0.23
VSX1-206ENST00000444511 TRGC1P0CF51 173 aa13.63□□□□□ -0.23
VSX1-206ENST00000444511 NKX2-5P52952 324 aaPredicted RBP13.63□□□□□ -0.23
VSX1-206ENST00000444511 DGAT2L7PQ6IED9 249 aa13.63□□□□□ -0.23
VSX1-206ENST00000444511 BIN3Q9NQY0 253 aa13.63□□□□□ -0.23
VSX1-206ENST00000444511 RASL11AQ6T310 242 aa13.62□□□□□ -0.23
VSX1-206ENST00000444511 REG3AQ06141 175 aa13.61□□□□□ -0.23
VSX1-206ENST00000444511 KRTAP26-1Q6PEX3 210 aa13.61□□□□□ -0.23
VSX1-206ENST00000444511 LYZL1Q6UWQ5 148 aa13.61□□□□□ -0.23
VSX1-206ENST00000444511 TRBV20OR9-2A0A075B6H5 130 aa13.6□□□□□ -0.23
VSX1-206ENST00000444511 IGLV10-54A0A075B6I4 117 aa13.6□□□□□ -0.23
VSX1-206ENST00000444511 BCL2P10415 239 aa13.6□□□□□ -0.23
VSX1-206ENST00000444511 KRTAP10-4P60372 401 aaPredicted RBP13.6□□□□□ -0.23
VSX1-206ENST00000444511 TMEM243Q9BU79 118 aa13.6□□□□□ -0.23
VSX1-206ENST00000444511 DPH3P1Q9H4G8 78 aa13.6□□□□□ -0.23
VSX1-206ENST00000444511 NTF3P20783 257 aa13.59□□□□□ -0.23
VSX1-206ENST00000444511 C9orf163Q8N9P6 203 aa13.59□□□□□ -0.23
VSX1-206ENST00000444511 NIT2Q9NQR4 276 aa13.59□□□□□ -0.23
VSX1-206ENST00000444511 C20orf203Q8NBC4 194 aa13.58□□□□□ -0.24
VSX1-206ENST00000444511 CLRN3Q8NCR9 226 aa13.58□□□□□ -0.24
VSX1-206ENST00000444511 C9orf62Q8N4C0 152 aa13.57□□□□□ -0.24
VSX1-206ENST00000444511 NUDT10Q8NFP7 164 aa13.57□□□□□ -0.24
VSX1-206ENST00000444511 NUDT11Q96G61 164 aa13.57□□□□□ -0.24
VSX1-206ENST00000444511 PGLYRP4Q96LB8 373 aa13.57□□□□□ -0.24
VSX1-206ENST00000444511 TRAV8-4A0A0B4J246 113 aa13.56□□□□□ -0.24
VSX1-206ENST00000444511 A0A1B0GUV1 79 aa13.56□□□□□ -0.24
VSX1-206ENST00000444511 UBE2L6O14933 153 aa13.56□□□□□ -0.24
VSX1-206ENST00000444511 CTRLP40313 264 aa13.56□□□□□ -0.24
VSX1-206ENST00000444511 WDR73Q6P4I2 378 aa13.56□□□□□ -0.24
VSX1-206ENST00000444511 SLC51BQ86UW2 128 aa13.56□□□□□ -0.24
VSX1-206ENST00000444511 TCTE3Q8IZS6 198 aa13.56□□□□□ -0.24
VSX1-206ENST00000444511 IGLV4-60A0A075B6I1 120 aa13.55□□□□□ -0.24
VSX1-206ENST00000444511 TAGLN2P37802 199 aaKnown RBP13.55□□□□□ -0.24
VSX1-206ENST00000444511 RPL37AP61513 92 aaKnown RBP13.55□□□□□ -0.24
VSX1-206ENST00000444511 COTL1Q14019 142 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms