RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 PRB4P10163 310 aaPredicted RBP2.15□□□□□ -2.07
LIG4-203ENST00000442234 DAD1P61803 113 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 ERHP84090 104 aaKnown RBP2.15□□□□□ -2.07
LIG4-203ENST00000442234 SDIM1Q6ZPB5 146 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 CD177Q8N6Q3 437 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 KLHL30-AS1Q8NEE0 82 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 COX14Q96I36 57 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 Q9H3A6 140 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 COL27A1Q8IZC6 1860 aaPredicted RBP2.15□□□□□ -2.07
LIG4-203ENST00000442234 TRBV19A0A075B6N1 114 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 WI2-2373I1.2A0A1W2PRP0 233 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 TMEM30CPA0ZSE6 113 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 MRPL33O75394 65 aaKnown RBP2.15□□□□□ -2.07
LIG4-203ENST00000442234 IGHV3-48P01763 117 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 IGHV3-13P01766 116 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 ZNF32P17041 273 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 CRYGSP22914 178 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 LAGE3Q14657 143 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 LINC00322Q6ZN03 302 aaPredicted RBP2.15□□□□□ -2.07
LIG4-203ENST00000442234 Q6ZPA2 131 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 Q8N7P7 452 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 RNF138Q8WVD3 245 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 LINC01619G3V211 115 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 INAFM2P0DMQ5 153 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 CXCL5P42830 114 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 SNRPD3P62318 126 aaKnown RBP2.14□□□□□ -2.07
LIG4-203ENST00000442234 CD164Q04900 197 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 CD69Q07108 199 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 ERCC8Q13216 396 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 Q86TA4 180 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 Q8N3U1 123 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 POM121L12Q8N7R1 296 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 LINC00482Q8N8I6 264 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 Q8N8P6 123 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 ITLN1Q8WWA0 313 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 C11orf68Q9H3H3 251 aaKnown RBP2.14□□□□□ -2.07
LIG4-203ENST00000442234 PROK2Q9HC23 129 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 MOB4Q9Y3A3 225 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 C19orf71A6NCJ1 209 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 USP17L23D6RBM5 183 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 SPRY2O43597 315 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 OXTP01178 125 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 LINC00205P59089 165 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 EBI3Q14213 229 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 SLC25A29Q8N8R3 303 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 ZNF524Q96C55 264 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 C17orf77Q96MU5 243 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 SLC50A1Q9BRV3 221 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 CEP192Q8TEP8 1941 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 KMT2AQ03164 3969 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 IGHV3-33P01772 117 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 LYZP61626 148 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 ZNF672Q499Z4 452 aaPredicted RBP2.14□□□□□ -2.07
LIG4-203ENST00000442234 TMEM200BQ69YZ2 307 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 CRIP3Q6Q6R5 217 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 DAZ4Q86SG3 579 aaKnown RBP2.14□□□□□ -2.07
LIG4-203ENST00000442234 FAM223AQ8IWN6 122 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 CLEC2BQ92478 149 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 ZNF714Q96N38 554 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 FOXB1Q99853 325 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 PRSS22Q9GZN4 317 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 ZMAT4Q9H898 229 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 DAZ1Q9NQZ3 744 aaKnown RBP2.14□□□□□ -2.07
LIG4-203ENST00000442234 FAM215AQ9Y5M1 114 aa2.14□□□□□ -2.07
LIG4-203ENST00000442234 PTPRBP23467 1997 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 MUC22E2RYF6 1773 aaPredicted RBP2.13□□□□□ -2.07
LIG4-203ENST00000442234 TRAV3A0A0B4J244 114 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 SH2D1AO60880 128 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 P0DMU3 169 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 FAM231AP0DMU4 169 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 FAM231CP0DMU5 169 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 PAPPA-AS1Q5QFB9 102 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 C11orf53Q8IXP5 236 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 TENM1Q9UKZ4 2725 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 IGHV3-64A0A075B6Q5 118 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 IGHV4-61A0A0C4DH41 118 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 A0A1W2PQD3 144 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 LINC00473A8K010 186 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 GRPP07492 148 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 HOXD3P31249 432 aaPredicted RBP2.13□□□□□ -2.07
LIG4-203ENST00000442234 FAM201AQ5SY85 155 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 NEXN-AS1Q8NBZ9 246 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 ICOSQ9Y6W8 199 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 A0A087WVE0 104 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 TRBV7-1A0A0A6YYK4 115 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 C12orf77C9JDV5 145 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 H7C423 109 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 TRIAP1O43715 76 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 ELANEP08246 267 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 COX7A1P24310 79 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 SS18Q15532 418 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 MLANAQ16655 118 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 FAM53AQ6NSI3 398 aaPredicted RBP2.13□□□□□ -2.07
LIG4-203ENST00000442234 SOSTDC1Q6X4U4 206 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 APRG1Q8IVJ8 170 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 DYNAPQ8N1N2 210 aa2.13□□□□□ -2.07
LIG4-203ENST00000442234 TRAV26-2A0A0B4J265 109 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 A0A0J9YY99 117 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 C15orf61A6NNL5 157 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 GATA1P15976 413 aaPredicted RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms