RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 AP5S1Q9NUS5 200 aa12.85□□□□□ -0.35
UBE2F-215ENST00000441728 LRP1Q07954 4544 aaKnown RBP12.85□□□□□ -0.35
UBE2F-215ENST00000441728 TRBV6-1A0A0K0K1D8 114 aa12.84□□□□□ -0.35
UBE2F-215ENST00000441728 HNRNPA3P51991 378 aaKnown RBP12.84□□□□□ -0.35
UBE2F-215ENST00000441728 SSTP61278 116 aa12.84□□□□□ -0.35
UBE2F-215ENST00000441728 LINC00269Q8N2A0 174 aa12.84□□□□□ -0.35
UBE2F-215ENST00000441728 CLRN3Q8NCR9 226 aa12.84□□□□□ -0.35
UBE2F-215ENST00000441728 OR10AG1Q8NH19 301 aa12.84□□□□□ -0.35
UBE2F-215ENST00000441728 DERL1Q9BUN8 251 aa12.84□□□□□ -0.35
UBE2F-215ENST00000441728 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.84□□□□□ -0.35
UBE2F-215ENST00000441728 RBX1P62877 108 aa12.83□□□□□ -0.36
UBE2F-215ENST00000441728 Q6ZRU5 148 aa12.83□□□□□ -0.36
UBE2F-215ENST00000441728 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.82□□□□□ -0.36
UBE2F-215ENST00000441728 FHITP49789 147 aa12.82□□□□□ -0.36
UBE2F-215ENST00000441728 PRR27Q6MZM9 219 aa12.82□□□□□ -0.36
UBE2F-215ENST00000441728 hDV102S1A0JD36 115 aa12.81□□□□□ -0.36
UBE2F-215ENST00000441728 S100A9P06702 114 aaKnown RBP12.81□□□□□ -0.36
UBE2F-215ENST00000441728 IGLV10-54A0A075B6I4 117 aa12.8□□□□□ -0.36
UBE2F-215ENST00000441728 IGHV1-24A0A0C4DH33 117 aa12.8□□□□□ -0.36
UBE2F-215ENST00000441728 MUC21A0A0G2JKD1 596 aa12.8□□□□□ -0.36
UBE2F-215ENST00000441728 MUC21A0A140T8X8 626 aa12.8□□□□□ -0.36
UBE2F-215ENST00000441728 CXCL1P09341 107 aa12.8□□□□□ -0.36
UBE2F-215ENST00000441728 AP1S3Q96PC3 154 aa12.8□□□□□ -0.36
UBE2F-215ENST00000441728 PRR34Q9NV39 138 aa12.8□□□□□ -0.36
UBE2F-215ENST00000441728 IGHV3-64A0A075B6Q5 118 aa12.79□□□□□ -0.36
UBE2F-215ENST00000441728 ARPC5O15511 151 aa12.79□□□□□ -0.36
UBE2F-215ENST00000441728 PFDN1O60925 122 aa12.79□□□□□ -0.36
UBE2F-215ENST00000441728 REG3AQ06141 175 aa12.79□□□□□ -0.36
UBE2F-215ENST00000441728 SDIM1Q6ZPB5 146 aa12.79□□□□□ -0.36
UBE2F-215ENST00000441728 HMCN2Q8NDA2 5059 aa12.78□□□□□ -0.36
UBE2F-215ENST00000441728 MGPP08493 103 aa12.78□□□□□ -0.36
UBE2F-215ENST00000441728 NTM-AS1Q6ZSK4 140 aa12.78□□□□□ -0.36
UBE2F-215ENST00000441728 BAGE2Q86Y30 109 aa12.78□□□□□ -0.36
UBE2F-215ENST00000441728 VAX2Q9UIW0 290 aa12.78□□□□□ -0.36
UBE2F-215ENST00000441728 FAT3Q8TDW7 4589 aa12.77□□□□□ -0.36
UBE2F-215ENST00000441728 TRAV8-4A0A0B4J246 113 aa12.77□□□□□ -0.37
UBE2F-215ENST00000441728 HMSDA8MTL9 139 aa12.77□□□□□ -0.37
UBE2F-215ENST00000441728 SMLR1H3BR10 107 aa12.77□□□□□ -0.37
UBE2F-215ENST00000441728 H7C1H1 209 aa12.77□□□□□ -0.37
UBE2F-215ENST00000441728 SNAI2O43623 268 aa12.77□□□□□ -0.37
UBE2F-215ENST00000441728 PAGE4O60829 102 aa12.77□□□□□ -0.37
UBE2F-215ENST00000441728 P01737 135 aa12.77□□□□□ -0.37
UBE2F-215ENST00000441728 ZNF345Q14585 488 aa12.77□□□□□ -0.37
UBE2F-215ENST00000441728 CYTL1Q9NRR1 136 aa12.77□□□□□ -0.37
UBE2F-215ENST00000441728 PANO1I0J062 215 aa12.76□□□□□ -0.37
UBE2F-215ENST00000441728 OR5AL1P0C617 328 aa12.76□□□□□ -0.37
UBE2F-215ENST00000441728 CNBPP62633 177 aaKnown RBP12.76□□□□□ -0.37
UBE2F-215ENST00000441728 WDR73Q6P4I2 378 aa12.76□□□□□ -0.37
UBE2F-215ENST00000441728 KCNRGQ8N5I3 272 aa12.76□□□□□ -0.37
UBE2F-215ENST00000441728 RNF185Q96GF1 192 aa12.76□□□□□ -0.37
UBE2F-215ENST00000441728 IQCJQ1A5X6 159 aa12.75□□□□□ -0.37
UBE2F-215ENST00000441728 C7orf33Q8WU49 177 aa12.75□□□□□ -0.37
UBE2F-215ENST00000441728 UBE2L6O14933 153 aa12.74□□□□□ -0.37
UBE2F-215ENST00000441728 TPPP3Q9BW30 176 aa12.74□□□□□ -0.37
UBE2F-215ENST00000441728 SSBP4Q9BWG4 385 aaPredicted RBP12.74□□□□□ -0.37
UBE2F-215ENST00000441728 A0A1B0GV50 99 aa12.73□□□□□ -0.37
UBE2F-215ENST00000441728 SCO2A0A1W2PP80 73 aa12.73□□□□□ -0.37
UBE2F-215ENST00000441728 MT1HL1P0DM35 61 aa12.73□□□□□ -0.37
UBE2F-215ENST00000441728 GZMBP10144 247 aa12.73□□□□□ -0.37
UBE2F-215ENST00000441728 RAB5CP51148 216 aa12.73□□□□□ -0.37
UBE2F-215ENST00000441728 KRTAP26-1Q6PEX3 210 aa12.73□□□□□ -0.37
UBE2F-215ENST00000441728 SFT2D1Q8WV19 159 aa12.73□□□□□ -0.37
UBE2F-215ENST00000441728 TMEM243Q9BU79 118 aa12.73□□□□□ -0.37
UBE2F-215ENST00000441728 A0A087WYN8 130 aa12.72□□□□□ -0.37
UBE2F-215ENST00000441728 SULT1A2P50226 295 aa12.72□□□□□ -0.37
UBE2F-215ENST00000441728 CIRBPQ14011 172 aaKnown RBP12.71□□□□□ -0.37
UBE2F-215ENST00000441728 FAM213BQ8TBF2 198 aa12.71□□□□□ -0.37
UBE2F-215ENST00000441728 CHTF8P0CG12 524 aa12.7□□□□□ -0.38
UBE2F-215ENST00000441728 CFAP161Q6P656 301 aa12.7□□□□□ -0.38
UBE2F-215ENST00000441728 UBR4Q5T4S7 5183 aa12.7□□□□□ -0.38
UBE2F-215ENST00000441728 KANTRA0A1W2PQU2 76 aa12.69□□□□□ -0.38
UBE2F-215ENST00000441728 NKX2-5P52952 324 aaPredicted RBP12.69□□□□□ -0.38
UBE2F-215ENST00000441728 C20orf203Q8NBC4 194 aa12.69□□□□□ -0.38
UBE2F-215ENST00000441728 MLST8Q9BVC4 326 aa12.69□□□□□ -0.38
UBE2F-215ENST00000441728 A0A1B0GUV1 79 aa12.68□□□□□ -0.38
UBE2F-215ENST00000441728 BCL2L11O43521 198 aa12.68□□□□□ -0.38
UBE2F-215ENST00000441728 EIF5AP63241 154 aaKnown RBP12.68□□□□□ -0.38
UBE2F-215ENST00000441728 SUMO4Q6EEV6 95 aa12.68□□□□□ -0.38
UBE2F-215ENST00000441728 TMUB2Q71RG4 321 aa12.68□□□□□ -0.38
UBE2F-215ENST00000441728 FER1L6-AS1Q8NA97 138 aa12.68□□□□□ -0.38
UBE2F-215ENST00000441728 SPACA4Q8TDM5 124 aa12.68□□□□□ -0.38
UBE2F-215ENST00000441728 KIF25-AS1Q9Y6Z4 181 aa12.68□□□□□ -0.38
UBE2F-215ENST00000441728 PKHD1L1Q86WI1 4243 aa12.67□□□□□ -0.38
UBE2F-215ENST00000441728 UMAD1C9J7I0 102 aa12.67□□□□□ -0.38
UBE2F-215ENST00000441728 M0QY20 66 aa12.67□□□□□ -0.38
UBE2F-215ENST00000441728 PHOX2AO14813 284 aa12.67□□□□□ -0.38
UBE2F-215ENST00000441728 RPS20P60866 119 aaKnown RBP12.67□□□□□ -0.38
UBE2F-215ENST00000441728 CACNG7P62955 275 aa12.67□□□□□ -0.38
UBE2F-215ENST00000441728 RASL11AQ6T310 242 aa12.67□□□□□ -0.38
UBE2F-215ENST00000441728 Q6ZNX1 250 aa12.67□□□□□ -0.38
UBE2F-215ENST00000441728 GTSF1Q8WW33 167 aa12.67□□□□□ -0.38
UBE2F-215ENST00000441728 IGLV4-60A0A075B6I1 120 aa12.66□□□□□ -0.38
UBE2F-215ENST00000441728 AMTP48728 403 aa12.66□□□□□ -0.38
UBE2F-215ENST00000441728 TCTE3Q8IZS6 198 aa12.66□□□□□ -0.38
UBE2F-215ENST00000441728 IGKV3OR2-268A0A0C4DH90 116 aa12.65□□□□□ -0.38
UBE2F-215ENST00000441728 XKRY2A2RUG3 117 aa12.65□□□□□ -0.38
UBE2F-215ENST00000441728 TRGC1P0CF51 173 aa12.65□□□□□ -0.38
UBE2F-215ENST00000441728 COTL1Q14019 142 aa12.65□□□□□ -0.38
UBE2F-215ENST00000441728 OR2D3Q8NGH3 330 aa12.65□□□□□ -0.38
UBE2F-215ENST00000441728 RPL35P42766 123 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms