RNA–Protein interactions for RNA: ENST00000440664.5

LINC01549-201, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 3 BASIC

Gene LINC01549, Length 714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-201ENST00000440664 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.75□□□□□ -2.29
LINC01549-201ENST00000440664 IGLV3-32A0A0A0MS00 114 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 TRAV5A0A0B4J249 113 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 IGKV1-9A0A0C4DH69 117 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 E5RI56 91 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 H7C1C5 153 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 MFSD11O43934 449 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 CST8O60676 142 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 BANF1O75531 89 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 IFNA1P01562 189 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 ATP5G3P48201 142 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 DEFA3P59666 94 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 NCALDP61601 193 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 VBP1P61758 197 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 LCN6P62502 163 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 DYNLT1P63172 113 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 RNASE10Q5GAN6 216 aaKnown RBP0.75□□□□□ -2.29
LINC01549-201ENST00000440664 C1orf137Q5JT78 98 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 EIF5AL1Q6IS14 154 aaKnown RBP0.75□□□□□ -2.29
LINC01549-201ENST00000440664 SOSTDC1Q6X4U4 206 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 S100A7AQ86SG5 101 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 Q8N814 137 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 WFDC9Q8NEX5 89 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 CDC26Q8NHZ8 85 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 ODF3Q96PU9 254 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 TP53RKQ96S44 253 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 OR2J1Q9GZK6 312 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 WFDC10AQ9H1F0 79 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 SH3BGRL3Q9H299 93 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 CENPHQ9H3R5 247 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 HEATR1Q9H583 2144 aaKnown RBP0.75□□□□□ -2.29
LINC01549-201ENST00000440664 OR52A1Q9UKL2 312 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 BOKQ9UMX3 212 aaPredicted RBP0.75□□□□□ -2.29
LINC01549-201ENST00000440664 SSR3Q9UNL2 185 aa0.75□□□□□ -2.29
LINC01549-201ENST00000440664 CHCHD2Q9Y6H1 151 aaPredicted RBP0.75□□□□□ -2.29
LINC01549-201ENST00000440664 TRBV6-8A0A0A6YYG3 113 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 DUXBA0A1W2PPF3 345 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 ZNF736B4DX44 427 aaPredicted RBP0.74□□□□□ -2.29
LINC01549-201ENST00000440664 INE1O15225 51 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 PIAS1O75925 651 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 GADD45GO95257 159 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 TFF1P04155 84 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 OR10J4P0C629 311 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 RNASE4P34096 147 aaKnown RBP0.74□□□□□ -2.29
LINC01549-201ENST00000440664 PHBP35232 272 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 CCL8P80075 99 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 GDF5OSQ5U4N7 250 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 HACD4Q5VWC8 232 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.74□□□□□ -2.29
LINC01549-201ENST00000440664 PLPP5Q8NEB5 264 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 OR5D14Q8NGL3 314 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 SKA2Q8WVK7 121 aaPredicted RBP0.74□□□□□ -2.29
LINC01549-201ENST00000440664 ADAT3Q96EY9 351 aaPredicted RBP0.74□□□□□ -2.29
LINC01549-201ENST00000440664 SNRNP25Q9BV90 132 aaKnown RBP0.74□□□□□ -2.29
LINC01549-201ENST00000440664 MAP1LC3BQ9GZQ8 125 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 RNASE7Q9H1E1 156 aaKnown RBP0.74□□□□□ -2.29
LINC01549-201ENST00000440664 FAIMQ9NVQ4 179 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 MED11Q9P086 117 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 HSPB8Q9UJY1 196 aa0.74□□□□□ -2.29
LINC01549-201ENST00000440664 TCRBV4S1A1TA0A5B7 111 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 CCDC160A6NGH7 325 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 RIIAD1A6NNX1 92 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 H3BUX3 64 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 TAX1BP3O14907 124 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 DEFB4AO15263 64 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 IGF2P01344 180 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 C1QBP02746 253 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 PAEPP09466 180 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 CMPK1P30085 196 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 SDC4P31431 198 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 SERPINB9P50453 376 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 BLCAPP62952 87 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 NDUFA11Q86Y39 141 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 NEK7Q8TDX7 302 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 AP3S1Q92572 193 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 POP5Q969H6 163 aaKnown RBP0.73□□□□□ -2.29
LINC01549-201ENST00000440664 MUCL1Q96DR8 90 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 ZHX1-C8orf76Q96EF9 292 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 MCEEQ96PE7 176 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 GINS3Q9BRX5 216 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 RTL8AQ9BWD3 113 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 TMEM126AQ9H061 195 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 BIN3Q9NQY0 253 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 ORMDL1Q9P0S3 153 aa0.73□□□□□ -2.29
LINC01549-201ENST00000440664 SNRNP200O75643 2136 aaKnown RBP0.73□□□□□ -2.29
LINC01549-201ENST00000440664 ERC2-IT1O76042 136 aa0.72□□□□□ -2.29
LINC01549-201ENST00000440664 OGNP20774 298 aaKnown RBP0.72□□□□□ -2.29
LINC01549-201ENST00000440664 SRIP30626 198 aa0.72□□□□□ -2.29
LINC01549-201ENST00000440664 ZNF93P35789 620 aaPredicted RBP0.72□□□□□ -2.29
LINC01549-201ENST00000440664 PPP1R2P41236 205 aa0.72□□□□□ -2.29
LINC01549-201ENST00000440664 DYNLT3P51808 116 aa0.72□□□□□ -2.29
LINC01549-201ENST00000440664 DSCR4P56555 118 aaPredicted RBP0.72□□□□□ -2.29
LINC01549-201ENST00000440664 CTAG1AP78358 180 aa0.72□□□□□ -2.29
LINC01549-201ENST00000440664 KRTAP20-1Q3LI63 56 aa0.72□□□□□ -2.29
LINC01549-201ENST00000440664 NCBP2-AS2Q69YL0 99 aa0.72□□□□□ -2.29
LINC01549-201ENST00000440664 PPP1R2P3Q6NXS1 205 aa0.72□□□□□ -2.29
LINC01549-201ENST00000440664 TEX261Q6UWH6 196 aa0.72□□□□□ -2.29
LINC01549-201ENST00000440664 TEN1Q86WV5 123 aa0.72□□□□□ -2.29
LINC01549-201ENST00000440664 FAM19A2Q8N3H0 131 aa0.72□□□□□ -2.29
LINC01549-201ENST00000440664 NUP35Q8NFH5 326 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms