RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 ZNF720Q7Z2F6 126 aa0.81□□□□□ -2.28
VPS41-207ENST00000439468 GRINAQ7Z429 371 aa0.81□□□□□ -2.28
VPS41-207ENST00000439468 DEFB106AQ8N104 65 aa0.81□□□□□ -2.28
VPS41-207ENST00000439468 EXOC3-AS1Q8N2X6 119 aa0.81□□□□□ -2.28
VPS41-207ENST00000439468 PXT1Q8NFP0 134 aa0.81□□□□□ -2.28
VPS41-207ENST00000439468 OR2T35Q8NGX2 323 aa0.81□□□□□ -2.28
VPS41-207ENST00000439468 CEP19Q96LK0 163 aa0.81□□□□□ -2.28
VPS41-207ENST00000439468 RASL12Q9NYN1 266 aa0.81□□□□□ -2.28
VPS41-207ENST00000439468 DSTQ03001 7570 aaKnown RBP0.8□□□□□ -2.28
VPS41-207ENST00000439468 M0R378 163 aa0.8□□□□□ -2.28
VPS41-207ENST00000439468 DNAL4O96015 105 aa0.8□□□□□ -2.28
VPS41-207ENST00000439468 IFNA7P01567 189 aa0.8□□□□□ -2.28
VPS41-207ENST00000439468 IFNA14P01570 189 aa0.8□□□□□ -2.28
VPS41-207ENST00000439468 CD2P06729 351 aa0.8□□□□□ -2.28
VPS41-207ENST00000439468 HSPE1P61604 102 aaKnown RBP0.8□□□□□ -2.28
VPS41-207ENST00000439468 TMED2Q15363 201 aa0.8□□□□□ -2.28
VPS41-207ENST00000439468 KRTAP19-2Q3LHN2 52 aa0.8□□□□□ -2.28
VPS41-207ENST00000439468 KRTAP19-6Q3LI70 58 aa0.8□□□□□ -2.28
VPS41-207ENST00000439468 GDF5OSQ5U4N7 250 aa0.8□□□□□ -2.28
VPS41-207ENST00000439468 TEX47Q8TBZ9 253 aa0.8□□□□□ -2.28
VPS41-207ENST00000439468 LYSMD1Q96S90 227 aa0.8□□□□□ -2.28
VPS41-207ENST00000439468 SLC25A21Q9BQT8 299 aaPredicted RBP0.8□□□□□ -2.28
VPS41-207ENST00000439468 TAS2R7Q9NYW3 318 aa0.8□□□□□ -2.28
VPS41-207ENST00000439468 SS18L2Q9UHA2 77 aa0.8□□□□□ -2.28
VPS41-207ENST00000439468 FLGP20930 4061 aaPredicted RBP0.8□□□□□ -2.28
VPS41-207ENST00000439468 TCRBV4S1A1TA0A5B7 111 aa0.79□□□□□ -2.28
VPS41-207ENST00000439468 H3BUX3 64 aa0.79□□□□□ -2.28
VPS41-207ENST00000439468 TCTAP57738 103 aa0.79□□□□□ -2.28
VPS41-207ENST00000439468 UBE2BP63146 152 aa0.79□□□□□ -2.28
VPS41-207ENST00000439468 BCL2L15Q5TBC7 163 aa0.79□□□□□ -2.28
VPS41-207ENST00000439468 DHRS4L2Q6PKH6 230 aa0.79□□□□□ -2.28
VPS41-207ENST00000439468 LYG2Q86SG7 212 aa0.79□□□□□ -2.28
VPS41-207ENST00000439468 OR10K1Q8NGX5 313 aa0.79□□□□□ -2.28
VPS41-207ENST00000439468 TMEM254Q8TBM7 123 aa0.79□□□□□ -2.28
VPS41-207ENST00000439468 MUCL1Q96DR8 90 aa0.79□□□□□ -2.28
VPS41-207ENST00000439468 MRPL57Q9BQC6 102 aaKnown RBP0.79□□□□□ -2.28
VPS41-207ENST00000439468 DYNLRB1Q9NP97 96 aa0.79□□□□□ -2.28
VPS41-207ENST00000439468 PCTPQ9UKL6 214 aa0.79□□□□□ -2.28
VPS41-207ENST00000439468 AHNAKQ09666 5890 aaKnown RBP0.79□□□□□ -2.28
VPS41-207ENST00000439468 TRGV10A0A0A0MS01 117 aa0.78□□□□□ -2.28
VPS41-207ENST00000439468 INE1O15225 51 aa0.78□□□□□ -2.28
VPS41-207ENST00000439468 DHFRP00374 187 aa0.78□□□□□ -2.28
VPS41-207ENST00000439468 DYNLT3P51808 116 aa0.78□□□□□ -2.28
VPS41-207ENST00000439468 ROMO1P60602 79 aa0.78□□□□□ -2.28
VPS41-207ENST00000439468 MAXP61244 160 aa0.78□□□□□ -2.28
VPS41-207ENST00000439468 GNG5P63218 68 aa0.78□□□□□ -2.28
VPS41-207ENST00000439468 BASP1P80723 227 aaKnown RBP0.78□□□□□ -2.28
VPS41-207ENST00000439468 MPV17LQ2QL34 196 aa0.78□□□□□ -2.28
VPS41-207ENST00000439468 DEFB136Q30KP8 78 aa0.78□□□□□ -2.28
VPS41-207ENST00000439468 CDC26Q8NHZ8 85 aa0.78□□□□□ -2.28
VPS41-207ENST00000439468 IMUPQ9GZP8 106 aa0.78□□□□□ -2.28
VPS41-207ENST00000439468 ARL5AQ9Y689 179 aa0.78□□□□□ -2.28
VPS41-207ENST00000439468 G3V2T6 193 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 H3BSH0 61 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 M0R233 179 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 CCL25O15444 150 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 ATG12O94817 140 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 PIRTP0C851 137 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 NFYBP25208 207 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 INSL3P51460 131 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 BLCAPP62952 87 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 CCL8P80075 99 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 SNCBQ16143 134 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 ZCCHC23Q6ZST2 131 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 C10orf82Q8WW14 230 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 BORCS5Q969J3 196 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 YPEL2Q96QA6 119 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 NPCDR1Q9BY65 106 aa0.77□□□□□ -2.29
VPS41-207ENST00000439468 UQCRHLA0A096LP55 91 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 TRBV6-4A0A1B0GX49 114 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 A8MWV9 139 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 K7ERJ3 54 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 CXCL1P09341 107 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 KLRD1Q13241 179 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 CCSMST1Q4G0I0 132 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 MORN4Q8NDC4 146 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 OR5D14Q8NGL3 314 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 Q8TAT8 98 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 LINC00526Q96FQ7 95 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 GPER1Q99527 375 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 PAIP2Q9BPZ3 127 aaKnown RBP0.76□□□□□ -2.29
VPS41-207ENST00000439468 TMEM70Q9BUB7 260 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 WFDC10AQ9H1F0 79 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 PRNDQ9UKY0 176 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
VPS41-207ENST00000439468 NBDYA0A0U1RRE5 68 aa0.75□□□□□ -2.29
VPS41-207ENST00000439468 ODAMA1E959 279 aa0.75□□□□□ -2.29
VPS41-207ENST00000439468 NPFFO15130 113 aa0.75□□□□□ -2.29
VPS41-207ENST00000439468 IGLV1-51P01701 117 aa0.75□□□□□ -2.29
VPS41-207ENST00000439468 PAEPP09466 180 aa0.75□□□□□ -2.29
VPS41-207ENST00000439468 ARF6P62330 175 aa0.75□□□□□ -2.29
VPS41-207ENST00000439468 CIRBPQ14011 172 aaKnown RBP0.75□□□□□ -2.29
VPS41-207ENST00000439468 SPCS2Q15005 226 aa0.75□□□□□ -2.29
VPS41-207ENST00000439468 FAM74A1Q5RGS3 127 aa0.75□□□□□ -2.29
VPS41-207ENST00000439468 PATE2Q6UY27 113 aa0.75□□□□□ -2.29
VPS41-207ENST00000439468 VMO1Q7Z5L0 202 aa0.75□□□□□ -2.29
VPS41-207ENST00000439468 CANT1Q8WVQ1 401 aa0.75□□□□□ -2.29
VPS41-207ENST00000439468 ZHX1-C8orf76Q96EF9 292 aa0.75□□□□□ -2.29
VPS41-207ENST00000439468 LINC00467Q9BRT7 94 aa0.75□□□□□ -2.29
VPS41-207ENST00000439468 GGACTQ9BVM4 153 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms