RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 TMUB2Q71RG4 321 aa8.85□□□□□ -0.99
GARNL3-206ENST00000439286 DAZAP1Q96EP5 407 aaKnown RBP8.85□□□□□ -0.99
GARNL3-206ENST00000439286 SSBP4Q9BWG4 385 aaPredicted RBP8.85□□□□□ -0.99
GARNL3-206ENST00000439286 DMBT1Q9UGM3 2413 aaPredicted RBP8.84□□□□□ -0.99
GARNL3-206ENST00000439286 A0A0D9SG52 128 aa8.84□□□□□ -0.99
GARNL3-206ENST00000439286 SMLR1H3BR10 107 aa8.84□□□□□ -0.99
GARNL3-206ENST00000439286 SNAI2O43623 268 aa8.84□□□□□ -0.99
GARNL3-206ENST00000439286 HLA-DQA1P01909 254 aa8.84□□□□□ -0.99
GARNL3-206ENST00000439286 OR5AL1P0C617 328 aa8.84□□□□□ -0.99
GARNL3-206ENST00000439286 MPV17L2Q567V2 206 aa8.84□□□□□ -0.99
GARNL3-206ENST00000439286 CIRBP-AS1Q8TBR5 109 aa8.84□□□□□ -0.99
GARNL3-206ENST00000439286 AP1S3Q96PC3 154 aa8.84□□□□□ -0.99
GARNL3-206ENST00000439286 DERL1Q9BUN8 251 aa8.84□□□□□ -0.99
GARNL3-206ENST00000439286 MLST8Q9BVC4 326 aa8.84□□□□□ -0.99
GARNL3-206ENST00000439286 TRBV25-1A0A075B6N4 114 aa8.83□□□□□ -1
GARNL3-206ENST00000439286 TPPP3Q9BW30 176 aa8.83□□□□□ -1
GARNL3-206ENST00000439286 SRRM2Q9UQ35 2752 aaKnown RBP8.82□□□□□ -1
GARNL3-206ENST00000439286 HMSDA8MTL9 139 aa8.82□□□□□ -1
GARNL3-206ENST00000439286 USP17L23D6RBM5 183 aa8.82□□□□□ -1
GARNL3-206ENST00000439286 TEX46H3BTG2 121 aa8.82□□□□□ -1
GARNL3-206ENST00000439286 H7C1H1 209 aa8.82□□□□□ -1
GARNL3-206ENST00000439286 IGLV2-8P01709 118 aa8.82□□□□□ -1
GARNL3-206ENST00000439286 RPS20P60866 119 aaKnown RBP8.82□□□□□ -1
GARNL3-206ENST00000439286 GAGE6Q13070 117 aa8.82□□□□□ -1
GARNL3-206ENST00000439286 BCL2L11O43521 198 aa8.81□□□□□ -1
GARNL3-206ENST00000439286 MGPP08493 103 aa8.81□□□□□ -1
GARNL3-206ENST00000439286 RPL35P42766 123 aaKnown RBP8.81□□□□□ -1
GARNL3-206ENST00000439286 DGAT2L7PQ6IED9 249 aa8.81□□□□□ -1
GARNL3-206ENST00000439286 LINC00269Q8N2A0 174 aa8.81□□□□□ -1
GARNL3-206ENST00000439286 MANBALQ9NQG1 85 aa8.81□□□□□ -1
GARNL3-206ENST00000439286 VAX2Q9UIW0 290 aa8.81□□□□□ -1
GARNL3-206ENST00000439286 MYCBP2O75592 4640 aa8.81□□□□□ -1
GARNL3-206ENST00000439286 IGHV1-24A0A0C4DH33 117 aa8.8□□□□□ -1
GARNL3-206ENST00000439286 XKRY2A2RUG3 117 aa8.8□□□□□ -1
GARNL3-206ENST00000439286 RBX1P62877 108 aa8.8□□□□□ -1
GARNL3-206ENST00000439286 GNG13Q9P2W3 67 aa8.8□□□□□ -1
GARNL3-206ENST00000439286 OXTP01178 125 aa8.79□□□□□ -1
GARNL3-206ENST00000439286 CACNG7P62955 275 aa8.79□□□□□ -1
GARNL3-206ENST00000439286 SERTAD4-AS1Q5TG53 156 aa8.79□□□□□ -1
GARNL3-206ENST00000439286 EIF5AL1Q6IS14 154 aaKnown RBP8.79□□□□□ -1
GARNL3-206ENST00000439286 CLPSL2Q6UWE3 100 aa8.79□□□□□ -1
GARNL3-206ENST00000439286 NTM-AS1Q6ZSK4 140 aa8.79□□□□□ -1
GARNL3-206ENST00000439286 FER1L6-AS1Q8NA97 138 aa8.79□□□□□ -1
GARNL3-206ENST00000439286 CLRN3Q8NCR9 226 aa8.79□□□□□ -1
GARNL3-206ENST00000439286 OR2D3Q8NGH3 330 aa8.79□□□□□ -1
GARNL3-206ENST00000439286 DNAH8Q96JB1 4490 aa8.79□□□□□ -1
GARNL3-206ENST00000439286 PRSS1P07477 247 aa8.78□□□□□ -1
GARNL3-206ENST00000439286 RAB5CP51148 216 aa8.78□□□□□ -1
GARNL3-206ENST00000439286 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
GARNL3-206ENST00000439286 IQCJQ1A5X6 159 aa8.78□□□□□ -1
GARNL3-206ENST00000439286 PRR34Q9NV39 138 aa8.78□□□□□ -1
GARNL3-206ENST00000439286 KIF25-AS1Q9Y6Z4 181 aa8.78□□□□□ -1
GARNL3-206ENST00000439286 F2Z2F3 143 aa8.77□□□□□ -1.01
GARNL3-206ENST00000439286 M0QY20 66 aa8.77□□□□□ -1.01
GARNL3-206ENST00000439286 GNG4P50150 75 aa8.77□□□□□ -1.01
GARNL3-206ENST00000439286 REG3AQ06141 175 aa8.77□□□□□ -1.01
GARNL3-206ENST00000439286 CENPWQ5EE01 88 aa8.77□□□□□ -1.01
GARNL3-206ENST00000439286 C9orf163Q8N9P6 203 aa8.77□□□□□ -1.01
GARNL3-206ENST00000439286 DPH3Q96FX2 82 aa8.77□□□□□ -1.01
GARNL3-206ENST00000439286 BIN3Q9NQY0 253 aa8.77□□□□□ -1.01
GARNL3-206ENST00000439286 FLG2Q5D862 2391 aaPredicted RBP8.77□□□□□ -1.01
GARNL3-206ENST00000439286 TRAV8-4A0A0B4J246 113 aa8.76□□□□□ -1.01
GARNL3-206ENST00000439286 UBE2L6O14933 153 aa8.76□□□□□ -1.01
GARNL3-206ENST00000439286 IFNA1P01562 189 aa8.76□□□□□ -1.01
GARNL3-206ENST00000439286 P01737 135 aa8.76□□□□□ -1.01
GARNL3-206ENST00000439286 TRGC1P0CF51 173 aa8.76□□□□□ -1.01
GARNL3-206ENST00000439286 GZMBP10144 247 aa8.76□□□□□ -1.01
GARNL3-206ENST00000439286 SUMO4Q6EEV6 95 aa8.76□□□□□ -1.01
GARNL3-206ENST00000439286 C11orf52Q96A22 123 aa8.76□□□□□ -1.01
GARNL3-206ENST00000439286 SMIM12Q96EX1 92 aa8.76□□□□□ -1.01
GARNL3-206ENST00000439286 TMEM243Q9BU79 118 aa8.76□□□□□ -1.01
GARNL3-206ENST00000439286 AP5S1Q9NUS5 200 aa8.76□□□□□ -1.01
GARNL3-206ENST00000439286 IGLV10-54A0A075B6I4 117 aa8.75□□□□□ -1.01
GARNL3-206ENST00000439286 TRAV1-1A0A0B4J248 108 aa8.75□□□□□ -1.01
GARNL3-206ENST00000439286 PDE6DO43924 150 aa8.75□□□□□ -1.01
GARNL3-206ENST00000439286 NKX2-5P52952 324 aaPredicted RBP8.75□□□□□ -1.01
GARNL3-206ENST00000439286 RASL11AQ6T310 242 aa8.75□□□□□ -1.01
GARNL3-206ENST00000439286 MED9Q9NWA0 146 aa8.75□□□□□ -1.01
GARNL3-206ENST00000439286 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.74□□□□□ -1.01
GARNL3-206ENST00000439286 hDV102S1A0JD36 115 aa8.74□□□□□ -1.01
GARNL3-206ENST00000439286 RAB19A4D1S5 217 aa8.74□□□□□ -1.01
GARNL3-206ENST00000439286 IGLC6P0CF74 106 aa8.74□□□□□ -1.01
GARNL3-206ENST00000439286 CCL20P78556 96 aa8.74□□□□□ -1.01
GARNL3-206ENST00000439286 WDR73Q6P4I2 378 aa8.74□□□□□ -1.01
GARNL3-206ENST00000439286 DPH3P1Q9H4G8 78 aa8.74□□□□□ -1.01
GARNL3-206ENST00000439286 NIT2Q9NQR4 276 aa8.74□□□□□ -1.01
GARNL3-206ENST00000439286 A0A1B0GUV1 79 aa8.73□□□□□ -1.01
GARNL3-206ENST00000439286 KRTAP10-4P60372 401 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-206ENST00000439286 C19orf71A6NCJ1 209 aa8.72□□□□□ -1.01
GARNL3-206ENST00000439286 NTF3P20783 257 aa8.72□□□□□ -1.01
GARNL3-206ENST00000439286 SULT1A2P50226 295 aa8.72□□□□□ -1.01
GARNL3-206ENST00000439286 MEF2BQ02080 365 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-206ENST00000439286 COTL1Q14019 142 aa8.72□□□□□ -1.01
GARNL3-206ENST00000439286 TWIST1Q15672 202 aa8.72□□□□□ -1.01
GARNL3-206ENST00000439286 LYZL1Q6UWQ5 148 aa8.72□□□□□ -1.01
GARNL3-206ENST00000439286 PGLYRP4Q96LB8 373 aa8.72□□□□□ -1.01
GARNL3-206ENST00000439286 IGHV3-64A0A075B6Q5 118 aa8.71□□□□□ -1.02
GARNL3-206ENST00000439286 AMTP48728 403 aa8.71□□□□□ -1.02
GARNL3-206ENST00000439286 CFAP161Q6P656 301 aa8.71□□□□□ -1.02
GARNL3-206ENST00000439286 SDIM1Q6ZPB5 146 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 263.9 ms