RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 TMEM97Q5BJF2 176 aa12.14□□□□□ -0.47
AC004540.1-201ENST00000439120 C15orf54Q8N8G6 183 aa12.14□□□□□ -0.47
AC004540.1-201ENST00000439120 DERL1Q9BUN8 251 aa12.14□□□□□ -0.47
AC004540.1-201ENST00000439120 VPS13BQ7Z7G8 4022 aa12.14□□□□□ -0.47
AC004540.1-201ENST00000439120 PLA2G1BP04054 148 aaKnown RBP12.13□□□□□ -0.47
AC004540.1-201ENST00000439120 CCL20P78556 96 aa12.13□□□□□ -0.47
AC004540.1-201ENST00000439120 LINC01620Q4KN68 170 aa12.13□□□□□ -0.47
AC004540.1-201ENST00000439120 CENPWQ5EE01 88 aa12.13□□□□□ -0.47
AC004540.1-201ENST00000439120 Q6ZSA8 131 aa12.13□□□□□ -0.47
AC004540.1-201ENST00000439120 C11orf52Q96A22 123 aa12.13□□□□□ -0.47
AC004540.1-201ENST00000439120 TRAV1-1A0A0B4J248 108 aa12.12□□□□□ -0.47
AC004540.1-201ENST00000439120 RPS20P60866 119 aaKnown RBP12.12□□□□□ -0.47
AC004540.1-201ENST00000439120 C14orf177Q52M58 125 aa12.12□□□□□ -0.47
AC004540.1-201ENST00000439120 MPV17L2Q567V2 206 aa12.12□□□□□ -0.47
AC004540.1-201ENST00000439120 ATRAIDQ6UW56 229 aa12.12□□□□□ -0.47
AC004540.1-201ENST00000439120 SRRM2Q9UQ35 2752 aaKnown RBP12.11□□□□□ -0.47
AC004540.1-201ENST00000439120 IFNA1P01562 189 aa12.11□□□□□ -0.47
AC004540.1-201ENST00000439120 MGPP08493 103 aa12.11□□□□□ -0.47
AC004540.1-201ENST00000439120 GNG4P50150 75 aa12.11□□□□□ -0.47
AC004540.1-201ENST00000439120 LINC00528Q8N1L1 170 aa12.11□□□□□ -0.47
AC004540.1-201ENST00000439120 FER1L6-AS1Q8NA97 138 aa12.11□□□□□ -0.47
AC004540.1-201ENST00000439120 OR2D3Q8NGH3 330 aa12.11□□□□□ -0.47
AC004540.1-201ENST00000439120 XKRY2A2RUG3 117 aa12.1□□□□□ -0.47
AC004540.1-201ENST00000439120 GZMBP10144 247 aa12.1□□□□□ -0.47
AC004540.1-201ENST00000439120 ENHOQ6UWT2 76 aa12.1□□□□□ -0.47
AC004540.1-201ENST00000439120 TRBV25-1A0A075B6N4 114 aa12.09□□□□□ -0.47
AC004540.1-201ENST00000439120 H7C1H1 209 aa12.09□□□□□ -0.47
AC004540.1-201ENST00000439120 PDE6DO43924 150 aa12.09□□□□□ -0.47
AC004540.1-201ENST00000439120 MEF2BQ02080 365 aaPredicted RBP12.09□□□□□ -0.47
AC004540.1-201ENST00000439120 SMIM12Q96EX1 92 aa12.09□□□□□ -0.47
AC004540.1-201ENST00000439120 VAX2Q9UIW0 290 aa12.09□□□□□ -0.47
AC004540.1-201ENST00000439120 KIF25-AS1Q9Y6Z4 181 aa12.09□□□□□ -0.47
AC004540.1-201ENST00000439120 P01737 135 aa12.08□□□□□ -0.48
AC004540.1-201ENST00000439120 HLA-DQA1P01909 254 aa12.08□□□□□ -0.48
AC004540.1-201ENST00000439120 CACNG7P62955 275 aa12.08□□□□□ -0.48
AC004540.1-201ENST00000439120 MIAQ16674 131 aa12.08□□□□□ -0.48
AC004540.1-201ENST00000439120 SCXQ7RTU7 201 aa12.08□□□□□ -0.48
AC004540.1-201ENST00000439120 DMBT1Q9UGM3 2413 aaPredicted RBP12.08□□□□□ -0.48
AC004540.1-201ENST00000439120 RAB19A4D1S5 217 aa12.07□□□□□ -0.48
AC004540.1-201ENST00000439120 IGLC6P0CF74 106 aa12.07□□□□□ -0.48
AC004540.1-201ENST00000439120 SULT1A2P50226 295 aa12.07□□□□□ -0.48
AC004540.1-201ENST00000439120 GAGE6Q13070 117 aa12.07□□□□□ -0.48
AC004540.1-201ENST00000439120 NTM-AS1Q6ZSK4 140 aa12.07□□□□□ -0.48
AC004540.1-201ENST00000439120 BIN3Q9NQY0 253 aa12.07□□□□□ -0.48
AC004540.1-201ENST00000439120 MED9Q9NWA0 146 aa12.07□□□□□ -0.48
AC004540.1-201ENST00000439120 F2Z2F3 143 aa12.06□□□□□ -0.48
AC004540.1-201ENST00000439120 IGLV2-8P01709 118 aa12.06□□□□□ -0.48
AC004540.1-201ENST00000439120 CLPSL2Q6UWE3 100 aa12.06□□□□□ -0.48
AC004540.1-201ENST00000439120 IGHV1-24A0A0C4DH33 117 aa12.05□□□□□ -0.48
AC004540.1-201ENST00000439120 C19orf71A6NCJ1 209 aa12.05□□□□□ -0.48
AC004540.1-201ENST00000439120 J3QL48 77 aa12.05□□□□□ -0.48
AC004540.1-201ENST00000439120 TRGC1P0CF51 173 aa12.05□□□□□ -0.48
AC004540.1-201ENST00000439120 RBX1P62877 108 aa12.05□□□□□ -0.48
AC004540.1-201ENST00000439120 CHAC1Q9BUX1 264 aa12.05□□□□□ -0.48
AC004540.1-201ENST00000439120 FLG2Q5D862 2391 aaPredicted RBP12.04□□□□□ -0.48
AC004540.1-201ENST00000439120 USP17L23D6RBM5 183 aa12.04□□□□□ -0.48
AC004540.1-201ENST00000439120 M0QY20 66 aa12.04□□□□□ -0.48
AC004540.1-201ENST00000439120 BCL2P10415 239 aa12.04□□□□□ -0.48
AC004540.1-201ENST00000439120 SUMO4Q6EEV6 95 aa12.04□□□□□ -0.48
AC004540.1-201ENST00000439120 LINC00269Q8N2A0 174 aa12.04□□□□□ -0.48
AC004540.1-201ENST00000439120 DNAH8Q96JB1 4490 aa12.03□□□□□ -0.48
AC004540.1-201ENST00000439120 NKX2-5P52952 324 aaPredicted RBP12.03□□□□□ -0.48
AC004540.1-201ENST00000439120 IQCJQ1A5X6 159 aa12.03□□□□□ -0.48
AC004540.1-201ENST00000439120 SLC51BQ86UW2 128 aa12.03□□□□□ -0.48
AC004540.1-201ENST00000439120 TCTE3Q8IZS6 198 aa12.03□□□□□ -0.48
AC004540.1-201ENST00000439120 HERC1Q15751 4861 aa12.03□□□□□ -0.48
AC004540.1-201ENST00000439120 RASL11AQ6T310 242 aa12.02□□□□□ -0.49
AC004540.1-201ENST00000439120 LYZL1Q6UWQ5 148 aa12.02□□□□□ -0.49
AC004540.1-201ENST00000439120 DEFB104AQ8WTQ1 72 aa12.02□□□□□ -0.49
AC004540.1-201ENST00000439120 DPH3P1Q9H4G8 78 aa12.02□□□□□ -0.49
AC004540.1-201ENST00000439120 MYCBP2O75592 4640 aa12.02□□□□□ -0.49
AC004540.1-201ENST00000439120 TAGLN2P37802 199 aaKnown RBP12.01□□□□□ -0.49
AC004540.1-201ENST00000439120 PRR34Q9NV39 138 aa12.01□□□□□ -0.49
AC004540.1-201ENST00000439120 TRBV20OR9-2A0A075B6H5 130 aa12□□□□□ -0.49
AC004540.1-201ENST00000439120 NTF3P20783 257 aa12□□□□□ -0.49
AC004540.1-201ENST00000439120 REG3AQ06141 175 aa12□□□□□ -0.49
AC004540.1-201ENST00000439120 CIRBP-AS1Q8TBR5 109 aa12□□□□□ -0.49
AC004540.1-201ENST00000439120 TMEM243Q9BU79 118 aa12□□□□□ -0.49
AC004540.1-201ENST00000439120 UBE2L6O14933 153 aa11.99□□□□□ -0.49
AC004540.1-201ENST00000439120 TWIST1Q15672 202 aa11.99□□□□□ -0.49
AC004540.1-201ENST00000439120 NUDT10Q8NFP7 164 aa11.99□□□□□ -0.49
AC004540.1-201ENST00000439120 NUDT11Q96G61 164 aa11.99□□□□□ -0.49
AC004540.1-201ENST00000439120 NIT2Q9NQR4 276 aa11.99□□□□□ -0.49
AC004540.1-201ENST00000439120 IGLV10-54A0A075B6I4 117 aa11.98□□□□□ -0.49
AC004540.1-201ENST00000439120 PRSS1P07477 247 aa11.98□□□□□ -0.49
AC004540.1-201ENST00000439120 DGAT2L7PQ6IED9 249 aa11.98□□□□□ -0.49
AC004540.1-201ENST00000439120 C9orf62Q8N4C0 152 aa11.98□□□□□ -0.49
AC004540.1-201ENST00000439120 CTRLP40313 264 aa11.97□□□□□ -0.49
AC004540.1-201ENST00000439120 WDR73Q6P4I2 378 aa11.97□□□□□ -0.49
AC004540.1-201ENST00000439120 PGLYRP4Q96LB8 373 aa11.97□□□□□ -0.49
AC004540.1-201ENST00000439120 RPP21Q9H633 154 aaKnown RBP11.97□□□□□ -0.49
AC004540.1-201ENST00000439120 COTL1Q14019 142 aa11.96□□□□□ -0.49
AC004540.1-201ENST00000439120 TRAV8-4A0A0B4J246 113 aa11.95□□□□□ -0.5
AC004540.1-201ENST00000439120 AMTP48728 403 aa11.95□□□□□ -0.5
AC004540.1-201ENST00000439120 SMIM15Q7Z3B0 74 aa11.95□□□□□ -0.5
AC004540.1-201ENST00000439120 C20orf203Q8NBC4 194 aa11.95□□□□□ -0.5
AC004540.1-201ENST00000439120 CLRN3Q8NCR9 226 aa11.95□□□□□ -0.5
AC004540.1-201ENST00000439120 RNASE7Q9H1E1 156 aaKnown RBP11.95□□□□□ -0.5
AC004540.1-201ENST00000439120 A0A1B0GUV1 79 aa11.94□□□□□ -0.5
AC004540.1-201ENST00000439120 C9orf163Q8N9P6 203 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms