RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 IGHV3-33P01772 117 aa10.3□□□□□ -0.76
PTCD1-204ENST00000430982 IGHV3-30-3P0DP02 117 aa10.3□□□□□ -0.76
PTCD1-204ENST00000430982 IGHV3-30-5P0DP03 117 aa10.3□□□□□ -0.76
PTCD1-204ENST00000430982 UBE2D3P61077 147 aa10.3□□□□□ -0.76
PTCD1-204ENST00000430982 UBE2D2P62837 147 aa10.3□□□□□ -0.76
PTCD1-204ENST00000430982 TWIST1Q15672 202 aa10.3□□□□□ -0.76
PTCD1-204ENST00000430982 TMEM241Q24JQ0 296 aa10.3□□□□□ -0.76
PTCD1-204ENST00000430982 WDR73Q6P4I2 378 aa10.3□□□□□ -0.76
PTCD1-204ENST00000430982 NEXN-AS1Q8NBZ9 246 aa10.3□□□□□ -0.76
PTCD1-204ENST00000430982 OR10G8Q8NGN5 311 aa10.3□□□□□ -0.76
PTCD1-204ENST00000430982 GTSF1Q8WW33 167 aa10.3□□□□□ -0.76
PTCD1-204ENST00000430982 A0A087WWC5 75 aa10.29□□□□□ -0.76
PTCD1-204ENST00000430982 CT83Q5H943 113 aa10.29□□□□□ -0.76
PTCD1-204ENST00000430982 LINC01556Q5JQF7 62 aa10.29□□□□□ -0.76
PTCD1-204ENST00000430982 C10orf126Q8N4M7 172 aa10.29□□□□□ -0.76
PTCD1-204ENST00000430982 PGLYRP4Q96LB8 373 aa10.29□□□□□ -0.76
PTCD1-204ENST00000430982 SMDT1Q9H4I9 107 aa10.29□□□□□ -0.76
PTCD1-204ENST00000430982 OSTCQ9NRP0 149 aa10.29□□□□□ -0.76
PTCD1-204ENST00000430982 TNFRSF18Q9Y5U5 241 aa10.29□□□□□ -0.76
PTCD1-204ENST00000430982 MYCBP2O75592 4640 aa10.29□□□□□ -0.76
PTCD1-204ENST00000430982 K7EP13 123 aa10.28□□□□□ -0.76
PTCD1-204ENST00000430982 ADIRFQ15847 76 aa10.28□□□□□ -0.76
PTCD1-204ENST00000430982 SUMO4Q6EEV6 95 aa10.28□□□□□ -0.76
PTCD1-204ENST00000430982 C15orf54Q8N8G6 183 aa10.28□□□□□ -0.76
PTCD1-204ENST00000430982 DPH3P1Q9H4G8 78 aa10.28□□□□□ -0.76
PTCD1-204ENST00000430982 NAT8Q9UHE5 227 aa10.28□□□□□ -0.76
PTCD1-204ENST00000430982 H7C1H1 209 aa10.27□□□□□ -0.77
PTCD1-204ENST00000430982 RPL23P62829 140 aaKnown RBP10.27□□□□□ -0.77
PTCD1-204ENST00000430982 NFE4Q86UQ8 179 aa10.27□□□□□ -0.77
PTCD1-204ENST00000430982 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.27□□□□□ -0.77
PTCD1-204ENST00000430982 ISOC2Q96AB3 205 aa10.27□□□□□ -0.77
PTCD1-204ENST00000430982 BORCS7Q96B45 105 aa10.27□□□□□ -0.77
PTCD1-204ENST00000430982 CNFNQ9BYD5 112 aa10.27□□□□□ -0.77
PTCD1-204ENST00000430982 FAT1Q14517 4588 aa10.27□□□□□ -0.77
PTCD1-204ENST00000430982 M0QY20 66 aa10.26□□□□□ -0.77
PTCD1-204ENST00000430982 SMIM15Q7Z3B0 74 aa10.26□□□□□ -0.77
PTCD1-204ENST00000430982 TSKUQ8WUA8 353 aa10.26□□□□□ -0.77
PTCD1-204ENST00000430982 Q6ZRN7 208 aaPredicted RBP10.25□□□□□ -0.77
PTCD1-204ENST00000430982 Q8N3U1 123 aa10.25□□□□□ -0.77
PTCD1-204ENST00000430982 V9GYV3 84 aa10.25□□□□□ -0.77
PTCD1-204ENST00000430982 HIGD1CA8MV81 97 aa10.24□□□□□ -0.77
PTCD1-204ENST00000430982 FOXA3P55318 350 aaPredicted RBP10.24□□□□□ -0.77
PTCD1-204ENST00000430982 RASL11AQ6T310 242 aa10.24□□□□□ -0.77
PTCD1-204ENST00000430982 DNAJC30Q96LL9 226 aa10.24□□□□□ -0.77
PTCD1-204ENST00000430982 GFRA4Q9GZZ7 299 aa10.24□□□□□ -0.77
PTCD1-204ENST00000430982 VPS13BQ7Z7G8 4022 aa10.24□□□□□ -0.77
PTCD1-204ENST00000430982 IBA57-AS1B1ANH7 110 aa10.23□□□□□ -0.77
PTCD1-204ENST00000430982 CLLU1Q5K131 121 aa10.23□□□□□ -0.77
PTCD1-204ENST00000430982 DAZ4Q86SG3 579 aaKnown RBP10.23□□□□□ -0.77
PTCD1-204ENST00000430982 Q9HAA7 133 aa10.23□□□□□ -0.77
PTCD1-204ENST00000430982 DAZ3Q9NR90 486 aaKnown RBP10.23□□□□□ -0.77
PTCD1-204ENST00000430982 URGCP-MRPS24S4R325 110 aa10.23□□□□□ -0.77
PTCD1-204ENST00000430982 TRBV6-8A0A0A6YYG3 113 aa10.22□□□□□ -0.77
PTCD1-204ENST00000430982 A0A1B0GUT8 65 aa10.22□□□□□ -0.77
PTCD1-204ENST00000430982 FAM231BA6NCW3 169 aa10.22□□□□□ -0.77
PTCD1-204ENST00000430982 KCNIP4Q6PIL6 250 aa10.22□□□□□ -0.77
PTCD1-204ENST00000430982 NIT1Q86X76 327 aa10.22□□□□□ -0.77
PTCD1-204ENST00000430982 A0A087WX48 190 aa10.21□□□□□ -0.77
PTCD1-204ENST00000430982 TRAV26-2A0A0B4J265 109 aa10.21□□□□□ -0.77
PTCD1-204ENST00000430982 TMEM262E9PQX1 116 aa10.21□□□□□ -0.77
PTCD1-204ENST00000430982 IFITM2Q01629 132 aa10.21□□□□□ -0.77
PTCD1-204ENST00000430982 TMEM97Q5BJF2 176 aa10.21□□□□□ -0.77
PTCD1-204ENST00000430982 NIT2Q9NQR4 276 aa10.21□□□□□ -0.77
PTCD1-204ENST00000430982 EPM2AB3EWF7 344 aa10.2□□□□□ -0.78
PTCD1-204ENST00000430982 RIGQ13278 110 aa10.2□□□□□ -0.78
PTCD1-204ENST00000430982 SPATA12Q7Z6I5 190 aa10.2□□□□□ -0.78
PTCD1-204ENST00000430982 GATD1Q8NB37 220 aa10.2□□□□□ -0.78
PTCD1-204ENST00000430982 NUP35Q8NFH5 326 aa10.2□□□□□ -0.78
PTCD1-204ENST00000430982 CHCHD5Q9BSY4 110 aa10.2□□□□□ -0.78
PTCD1-204ENST00000430982 EREGO14944 169 aa10.19□□□□□ -0.78
PTCD1-204ENST00000430982 PSCAO43653 123 aa10.19□□□□□ -0.78
PTCD1-204ENST00000430982 LAGE3Q14657 143 aa10.19□□□□□ -0.78
PTCD1-204ENST00000430982 NTM-AS1Q6ZSK4 140 aa10.19□□□□□ -0.78
PTCD1-204ENST00000430982 NAT8BQ9UHF3 227 aa10.19□□□□□ -0.78
PTCD1-204ENST00000430982 UBR4Q5T4S7 5183 aa10.19□□□□□ -0.78
PTCD1-204ENST00000430982 KLK12Q9UKR0 248 aa10.18□□□□□ -0.78
PTCD1-204ENST00000430982 TRBV25-1A0A075B6N4 114 aa10.17□□□□□ -0.78
PTCD1-204ENST00000430982 TRAV8-3A0A0A6YYJ7 113 aa10.17□□□□□ -0.78
PTCD1-204ENST00000430982 IGHV1-24A0A0C4DH33 117 aa10.17□□□□□ -0.78
PTCD1-204ENST00000430982 INAFM2P0DMQ5 153 aa10.17□□□□□ -0.78
PTCD1-204ENST00000430982 KRTAP10-2P60368 255 aa10.17□□□□□ -0.78
PTCD1-204ENST00000430982 GAGE6Q13070 117 aa10.17□□□□□ -0.78
PTCD1-204ENST00000430982 ELOBQ15370 118 aa10.17□□□□□ -0.78
PTCD1-204ENST00000430982 DEFB104AQ8WTQ1 72 aa10.17□□□□□ -0.78
PTCD1-204ENST00000430982 RPL39LQ96EH5 51 aaKnown RBP10.17□□□□□ -0.78
PTCD1-204ENST00000430982 CHCHD7Q9BUK0 85 aa10.17□□□□□ -0.78
PTCD1-204ENST00000430982 TMEM191AQ9H0A3 160 aa10.17□□□□□ -0.78
PTCD1-204ENST00000430982 A0A087WTM6 91 aa10.16□□□□□ -0.78
PTCD1-204ENST00000430982 SMIM27A0A1W2PRY6 76 aa10.16□□□□□ -0.78
PTCD1-204ENST00000430982 PKIAP61925 76 aa10.16□□□□□ -0.78
PTCD1-204ENST00000430982 FRZBQ92765 325 aa10.16□□□□□ -0.78
PTCD1-204ENST00000430982 TM2D2Q9BX73 214 aa10.16□□□□□ -0.78
PTCD1-204ENST00000430982 COTL1Q14019 142 aa10.15□□□□□ -0.78
PTCD1-204ENST00000430982 IQCJQ1A5X6 159 aa10.15□□□□□ -0.78
PTCD1-204ENST00000430982 MPV17L2Q567V2 206 aa10.15□□□□□ -0.78
PTCD1-204ENST00000430982 AMN1Q8IY45 258 aa10.15□□□□□ -0.78
PTCD1-204ENST00000430982 UBE2WQ96B02 151 aa10.15□□□□□ -0.78
PTCD1-204ENST00000430982 ATRAIDQ6UW56 229 aa10.14□□□□□ -0.79
PTCD1-204ENST00000430982 RNF185Q96GF1 192 aa10.14□□□□□ -0.79
PTCD1-204ENST00000430982 TMEM243Q9BU79 118 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms