RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 A0A0U1RRA0 63 aa8.75□□□□□ -1.01
PTCH1-208ENST00000430669 K7EQG2 157 aa8.75□□□□□ -1.01
PTCH1-208ENST00000430669 ICOSQ9Y6W8 199 aa8.75□□□□□ -1.01
PTCH1-208ENST00000430669 IGHV3-38A0A0C4DH36 116 aa8.75□□□□□ -1.01
PTCH1-208ENST00000430669 IGLC6P0CF74 106 aa8.75□□□□□ -1.01
PTCH1-208ENST00000430669 ANGP03950 147 aaKnown RBP8.75□□□□□ -1.01
PTCH1-208ENST00000430669 H3BQ85 93 aa8.75□□□□□ -1.01
PTCH1-208ENST00000430669 K7EP34 96 aa8.74□□□□□ -1.01
PTCH1-208ENST00000430669 CRIP2P52943 208 aaPredicted RBP8.74□□□□□ -1.01
PTCH1-208ENST00000430669 HHLA3Q9XRX5 114 aa8.74□□□□□ -1.01
PTCH1-208ENST00000430669 C11orf86A6NJI1 115 aa8.74□□□□□ -1.01
PTCH1-208ENST00000430669 IGLV1-40P01703 118 aa8.74□□□□□ -1.01
PTCH1-208ENST00000430669 SPINK8P0C7L1 97 aa8.74□□□□□ -1.01
PTCH1-208ENST00000430669 F8WEM9 126 aa8.74□□□□□ -1.01
PTCH1-208ENST00000430669 CRYBA4P53673 196 aa8.74□□□□□ -1.01
PTCH1-208ENST00000430669 TMEM61Q8N0U2 210 aa8.73□□□□□ -1.01
PTCH1-208ENST00000430669 EDA2RQ9HAV5 297 aa8.73□□□□□ -1.01
PTCH1-208ENST00000430669 LINC01548A6NM66 108 aa8.73□□□□□ -1.01
PTCH1-208ENST00000430669 MDFICQ9P1T7 246 aa8.73□□□□□ -1.01
PTCH1-208ENST00000430669 H3BMM0 161 aa8.73□□□□□ -1.01
PTCH1-208ENST00000430669 UBE2WQ96B02 151 aa8.73□□□□□ -1.01
PTCH1-208ENST00000430669 E9PLD3 99 aa8.73□□□□□ -1.01
PTCH1-208ENST00000430669 IGLV2-11P01706 119 aa8.73□□□□□ -1.01
PTCH1-208ENST00000430669 ODF1Q14990 250 aa8.73□□□□□ -1.01
PTCH1-208ENST00000430669 GYPEP15421 78 aa8.72□□□□□ -1.01
PTCH1-208ENST00000430669 MSRB1Q9NZV6 116 aa8.72□□□□□ -1.01
PTCH1-208ENST00000430669 ATP6V0E2Q8NHE4 81 aa8.72□□□□□ -1.01
PTCH1-208ENST00000430669 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.72□□□□□ -1.01
PTCH1-208ENST00000430669 IGKV2-29A2NJV5 120 aaPredicted RBP8.72□□□□□ -1.01
PTCH1-208ENST00000430669 GATA1P15976 413 aaPredicted RBP8.72□□□□□ -1.01
PTCH1-208ENST00000430669 SMAD5-AS1Q9Y6J3 95 aa8.72□□□□□ -1.01
PTCH1-208ENST00000430669 CCL25O15444 150 aa8.72□□□□□ -1.01
PTCH1-208ENST00000430669 DEFB114Q30KQ6 69 aa8.72□□□□□ -1.01
PTCH1-208ENST00000430669 ZFAND6Q6FIF0 208 aa8.72□□□□□ -1.01
PTCH1-208ENST00000430669 NPSP0C0P6 89 aa8.71□□□□□ -1.01
PTCH1-208ENST00000430669 FGF6P10767 208 aa8.71□□□□□ -1.01
PTCH1-208ENST00000430669 PIK3CD-AS1Q5SR53 167 aa8.71□□□□□ -1.01
PTCH1-208ENST00000430669 ATP5G1P05496 136 aa8.71□□□□□ -1.01
PTCH1-208ENST00000430669 CXCL5P42830 114 aa8.71□□□□□ -1.01
PTCH1-208ENST00000430669 PCP4P48539 62 aa8.71□□□□□ -1.01
PTCH1-208ENST00000430669 C9JAW5 83 aa8.71□□□□□ -1.02
PTCH1-208ENST00000430669 LINC00322Q6ZN03 302 aaPredicted RBP8.71□□□□□ -1.02
PTCH1-208ENST00000430669 DEFB125Q8N687 156 aa8.71□□□□□ -1.02
PTCH1-208ENST00000430669 CNFNQ9BYD5 112 aa8.71□□□□□ -1.02
PTCH1-208ENST00000430669 NUPR1O60356 82 aa8.71□□□□□ -1.02
PTCH1-208ENST00000430669 ZNF702PQ9H963 129 aa8.71□□□□□ -1.02
PTCH1-208ENST00000430669 C12orf74Q32Q52 190 aa8.7□□□□□ -1.02
PTCH1-208ENST00000430669 NKAPP1Q8N9T2 125 aa8.7□□□□□ -1.02
PTCH1-208ENST00000430669 NOTCH2Q04721 2471 aa8.7□□□□□ -1.02
PTCH1-208ENST00000430669 ZNF80P51504 273 aaPredicted RBP8.7□□□□□ -1.02
PTCH1-208ENST00000430669 C20orf173Q96LM9 149 aa8.7□□□□□ -1.02
PTCH1-208ENST00000430669 LAMTOR3Q9UHA4 124 aa8.7□□□□□ -1.02
PTCH1-208ENST00000430669 LYRM9A8MSI8 78 aa8.69□□□□□ -1.02
PTCH1-208ENST00000430669 PLA2G2AP14555 144 aa8.69□□□□□ -1.02
PTCH1-208ENST00000430669 PPDPFLQ8WWR9 84 aa8.69□□□□□ -1.02
PTCH1-208ENST00000430669 MAJINQ3KP22 176 aa8.69□□□□□ -1.02
PTCH1-208ENST00000430669 CDSNQ15517 529 aa8.69□□□□□ -1.02
PTCH1-208ENST00000430669 PCP2Q8IVA1 136 aa8.69□□□□□ -1.02
PTCH1-208ENST00000430669 TINCRA0A1B0GVN0 87 aa8.69□□□□□ -1.02
PTCH1-208ENST00000430669 TRAV8-3A0A0A6YYJ7 113 aa8.69□□□□□ -1.02
PTCH1-208ENST00000430669 ZFAND2AQ8N6M9 145 aa8.69□□□□□ -1.02
PTCH1-208ENST00000430669 PIFOQ8TCI5 191 aa8.68□□□□□ -1.02
PTCH1-208ENST00000430669 COX7A2LO14548 114 aa8.68□□□□□ -1.02
PTCH1-208ENST00000430669 LAMA2P24043 3122 aaKnown RBP8.68□□□□□ -1.02
PTCH1-208ENST00000430669 CRIP1P50238 77 aa8.68□□□□□ -1.02
PTCH1-208ENST00000430669 Q9H8V8 135 aa8.68□□□□□ -1.02
PTCH1-208ENST00000430669 ABCA12Q86UK0 2595 aa8.68□□□□□ -1.02
PTCH1-208ENST00000430669 CRLF1O75462 422 aa8.68□□□□□ -1.02
PTCH1-208ENST00000430669 OCIAD2Q56VL3 154 aa8.68□□□□□ -1.02
PTCH1-208ENST00000430669 XCL1P47992 114 aa8.67□□□□□ -1.02
PTCH1-208ENST00000430669 COX7B2Q8TF08 81 aa8.67□□□□□ -1.02
PTCH1-208ENST00000430669 RANBP2P49792 3224 aaKnown RBP8.67□□□□□ -1.02
PTCH1-208ENST00000430669 WFDC11Q8NEX6 87 aa8.67□□□□□ -1.02
PTCH1-208ENST00000430669 PFN2P35080 140 aa8.67□□□□□ -1.02
PTCH1-208ENST00000430669 GDF5OSQ5U4N7 250 aa8.67□□□□□ -1.02
PTCH1-208ENST00000430669 USP9XQ93008 2570 aaPredicted RBP8.67□□□□□ -1.02
PTCH1-208ENST00000430669 GAGE2BQ13066 116 aa8.67□□□□□ -1.02
PTCH1-208ENST00000430669 GAGE2EQ4V326 116 aa8.67□□□□□ -1.02
PTCH1-208ENST00000430669 GAGE2DQ9UEU5 116 aa8.67□□□□□ -1.02
PTCH1-208ENST00000430669 NAA38Q9BRA0 125 aaKnown RBP8.66□□□□□ -1.02
PTCH1-208ENST00000430669 IGHV4-4A0A075B6R2 117 aa8.66□□□□□ -1.02
PTCH1-208ENST00000430669 KLLNB2CW77 178 aa8.66□□□□□ -1.02
PTCH1-208ENST00000430669 K7EP13 123 aa8.66□□□□□ -1.02
PTCH1-208ENST00000430669 LAMA3Q16787 3333 aa8.66□□□□□ -1.02
PTCH1-208ENST00000430669 C20orf203Q8NBC4 194 aa8.66□□□□□ -1.02
PTCH1-208ENST00000430669 RNASE13Q5GAN3 156 aaKnown RBP8.66□□□□□ -1.02
PTCH1-208ENST00000430669 PRO0255Q9UI72 69 aa8.66□□□□□ -1.02
PTCH1-208ENST00000430669 FN1P02751 2386 aaKnown RBP8.65□□□□□ -1.02
PTCH1-208ENST00000430669 CDPF1Q6NVV7 123 aa8.65□□□□□ -1.02
PTCH1-208ENST00000430669 Q6ZSV7 163 aa8.65□□□□□ -1.02
PTCH1-208ENST00000430669 DCANP1Q8TF63 244 aa8.65□□□□□ -1.02
PTCH1-208ENST00000430669 IGHV1-58A0A0C4DH39 117 aa8.65□□□□□ -1.02
PTCH1-208ENST00000430669 SOCS3O14543 225 aa8.65□□□□□ -1.02
PTCH1-208ENST00000430669 RPL39P62891 51 aaKnown RBP8.65□□□□□ -1.02
PTCH1-208ENST00000430669 COX8CQ7Z4L0 72 aa8.65□□□□□ -1.02
PTCH1-208ENST00000430669 C1orf43Q9BWL3 253 aa8.65□□□□□ -1.02
PTCH1-208ENST00000430669 LINC00173Q6ZV60 143 aa8.65□□□□□ -1.02
PTCH1-208ENST00000430669 ZNF625Q96I27 306 aaPredicted RBP8.65□□□□□ -1.02
PTCH1-208ENST00000430669 SPRY2O43597 315 aa8.65□□□□□ -1.03
PTCH1-208ENST00000430669 NDUFA7O95182 113 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms