RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 KRTAP11-1Q8IUC1 163 aa7.05□□□□□ -1.28
DDX39B-208ENST00000428098 TRAV1-1A0A0B4J248 108 aa7.04□□□□□ -1.28
DDX39B-208ENST00000428098 TRAV34A0A0B4J273 112 aa7.04□□□□□ -1.28
DDX39B-208ENST00000428098 IGHV1-24A0A0C4DH33 117 aa7.04□□□□□ -1.28
DDX39B-208ENST00000428098 HMGB3O15347 200 aaKnown RBP7.04□□□□□ -1.28
DDX39B-208ENST00000428098 PTTG1IPP53801 180 aa7.04□□□□□ -1.28
DDX39B-208ENST00000428098 ZNF56Q15929 161 aa7.04□□□□□ -1.28
DDX39B-208ENST00000428098 PHF5AQ7RTV0 110 aaKnown RBP7.04□□□□□ -1.28
DDX39B-208ENST00000428098 C5orf17Q8NAS9 161 aa7.04□□□□□ -1.28
DDX39B-208ENST00000428098 AQP10Q96PS8 301 aa7.04□□□□□ -1.28
DDX39B-208ENST00000428098 KCNIP2Q9NS61 270 aa7.04□□□□□ -1.28
DDX39B-208ENST00000428098 EPDR1Q9UM22 224 aa7.04□□□□□ -1.28
DDX39B-208ENST00000428098 H3BMQ9 156 aa7.03□□□□□ -1.28
DDX39B-208ENST00000428098 TPT1P13693 172 aaKnown RBP7.03□□□□□ -1.28
DDX39B-208ENST00000428098 BTCP35070 178 aa7.03□□□□□ -1.28
DDX39B-208ENST00000428098 CYCSP99999 105 aaKnown RBP7.03□□□□□ -1.28
DDX39B-208ENST00000428098 GAGE2BQ13066 116 aa7.03□□□□□ -1.28
DDX39B-208ENST00000428098 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.03□□□□□ -1.28
DDX39B-208ENST00000428098 TMSB15BA0A087X1C1 80 aa7.02□□□□□ -1.29
DDX39B-208ENST00000428098 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.02□□□□□ -1.29
DDX39B-208ENST00000428098 C17orf112F2Z3M2 114 aa7.02□□□□□ -1.29
DDX39B-208ENST00000428098 K7EQM0 130 aa7.02□□□□□ -1.29
DDX39B-208ENST00000428098 SULT1A2P50226 295 aa7.02□□□□□ -1.29
DDX39B-208ENST00000428098 SUMO1P63165 101 aaKnown RBP7.02□□□□□ -1.29
DDX39B-208ENST00000428098 C9orf116Q5BN46 136 aaPredicted RBP7.02□□□□□ -1.29
DDX39B-208ENST00000428098 LCE2CQ5TA81 110 aa7.02□□□□□ -1.29
DDX39B-208ENST00000428098 PQLC2Q6ZP29 291 aa7.02□□□□□ -1.29
DDX39B-208ENST00000428098 ZFP82Q8N141 532 aa7.02□□□□□ -1.29
DDX39B-208ENST00000428098 SDHCQ99643 169 aaPredicted RBP7.02□□□□□ -1.29
DDX39B-208ENST00000428098 IGKV3OR2-268A0A0C4DH90 116 aa7.01□□□□□ -1.29
DDX39B-208ENST00000428098 UBE2D1P51668 147 aa7.01□□□□□ -1.29
DDX39B-208ENST00000428098 CHCHD10Q8WYQ3 142 aaPredicted RBP7.01□□□□□ -1.29
DDX39B-208ENST00000428098 KRTAP4-1Q9BYQ7 146 aa7.01□□□□□ -1.29
DDX39B-208ENST00000428098 CDIP1Q9H305 208 aa7.01□□□□□ -1.29
DDX39B-208ENST00000428098 ARL2-SNX15V9GYD0 113 aa7.01□□□□□ -1.29
DDX39B-208ENST00000428098 F5H697 171 aa7□□□□□ -1.29
DDX39B-208ENST00000428098 SH2D1AO60880 128 aa7□□□□□ -1.29
DDX39B-208ENST00000428098 RPL13AP40429 203 aaKnown RBP7□□□□□ -1.29
DDX39B-208ENST00000428098 CARD19Q96LW7 228 aa7□□□□□ -1.29
DDX39B-208ENST00000428098 ZNF471Q9BX82 626 aaPredicted RBP7□□□□□ -1.29
DDX39B-208ENST00000428098 MRPS26Q9BYN8 205 aaKnown RBP7□□□□□ -1.29
DDX39B-208ENST00000428098 NAP1L6A6NFF2 107 aa6.99□□□□□ -1.29
DDX39B-208ENST00000428098 ARL14EPLP0DKL9 152 aa6.99□□□□□ -1.29
DDX39B-208ENST00000428098 RPL12P30050 165 aaKnown RBP6.99□□□□□ -1.29
DDX39B-208ENST00000428098 TMBIM6P55061 237 aa6.99□□□□□ -1.29
DDX39B-208ENST00000428098 FOXI1Q12951 378 aa6.99□□□□□ -1.29
DDX39B-208ENST00000428098 OR10AG1Q8NH19 301 aa6.99□□□□□ -1.29
DDX39B-208ENST00000428098 RETNLBQ9BQ08 111 aa6.99□□□□□ -1.29
DDX39B-208ENST00000428098 SEC22CQ9BRL7 303 aa6.99□□□□□ -1.29
DDX39B-208ENST00000428098 TMEM243Q9BU79 118 aa6.99□□□□□ -1.29
DDX39B-208ENST00000428098 SSBP4Q9BWG4 385 aaPredicted RBP6.99□□□□□ -1.29
DDX39B-208ENST00000428098 TRAV6A0A075B6T7 132 aa6.98□□□□□ -1.29
DDX39B-208ENST00000428098 MUC21A0A140T8X8 626 aa6.98□□□□□ -1.29
DDX39B-208ENST00000428098 A0A1W2PPV4 95 aa6.98□□□□□ -1.29
DDX39B-208ENST00000428098 H0YIZ8 118 aa6.98□□□□□ -1.29
DDX39B-208ENST00000428098 A0A087WZ39 114 aa6.97□□□□□ -1.29
DDX39B-208ENST00000428098 DEFA3P59666 94 aa6.97□□□□□ -1.29
DDX39B-208ENST00000428098 SYCNQ0VAF6 134 aa6.97□□□□□ -1.29
DDX39B-208ENST00000428098 RBM38Q9H0Z9 239 aaKnown RBP6.97□□□□□ -1.29
DDX39B-208ENST00000428098 PKIGQ9Y2B9 76 aa6.97□□□□□ -1.29
DDX39B-208ENST00000428098 LOC107984640A0A0U1RRK4 108 aa6.96□□□□□ -1.3
DDX39B-208ENST00000428098 BCL2P10415 239 aa6.96□□□□□ -1.3
DDX39B-208ENST00000428098 EIF5AP63241 154 aaKnown RBP6.96□□□□□ -1.3
DDX39B-208ENST00000428098 CARHSP1Q9Y2V2 147 aaKnown RBP6.96□□□□□ -1.3
DDX39B-208ENST00000428098 M0QY20 66 aa6.95□□□□□ -1.3
DDX39B-208ENST00000428098 GCHFRP30047 84 aa6.95□□□□□ -1.3
DDX39B-208ENST00000428098 SSTP61278 116 aa6.95□□□□□ -1.3
DDX39B-208ENST00000428098 TPRXLQ17RH7 258 aa6.95□□□□□ -1.3
DDX39B-208ENST00000428098 COX8CQ7Z4L0 72 aa6.95□□□□□ -1.3
DDX39B-208ENST00000428098 RPP21Q9H633 154 aaKnown RBP6.95□□□□□ -1.3
DDX39B-208ENST00000428098 STAG3L2P0CL84 134 aa6.94□□□□□ -1.3
DDX39B-208ENST00000428098 STAG3L3P0CL85 134 aa6.94□□□□□ -1.3
DDX39B-208ENST00000428098 ZNF674Q2M3X9 581 aa6.94□□□□□ -1.3
DDX39B-208ENST00000428098 FAM162BQ5T6X4 162 aa6.94□□□□□ -1.3
DDX39B-208ENST00000428098 Q86TA4 180 aa6.94□□□□□ -1.3
DDX39B-208ENST00000428098 WFDC1Q9HC57 220 aa6.94□□□□□ -1.3
DDX39B-208ENST00000428098 IGHV1-58A0A0C4DH39 117 aa6.93□□□□□ -1.3
DDX39B-208ENST00000428098 NKX2-5P52952 324 aaPredicted RBP6.93□□□□□ -1.3
DDX39B-208ENST00000428098 SCGB1C1Q8TD33 95 aa6.93□□□□□ -1.3
DDX39B-208ENST00000428098 MLST8Q9BVC4 326 aa6.93□□□□□ -1.3
DDX39B-208ENST00000428098 SMIM3Q9BZL3 60 aa6.93□□□□□ -1.3
DDX39B-208ENST00000428098 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.92□□□□□ -1.3
DDX39B-208ENST00000428098 SIX6O95475 246 aa6.92□□□□□ -1.3
DDX39B-208ENST00000428098 CRYGAP11844 174 aa6.92□□□□□ -1.3
DDX39B-208ENST00000428098 XCL1P47992 114 aa6.92□□□□□ -1.3
DDX39B-208ENST00000428098 MEF2BQ02080 365 aaPredicted RBP6.92□□□□□ -1.3
DDX39B-208ENST00000428098 RAB24Q969Q5 203 aa6.92□□□□□ -1.3
DDX39B-208ENST00000428098 IGLV7-46A0A075B6I9 117 aa6.91□□□□□ -1.3
DDX39B-208ENST00000428098 A0A087X002 238 aa6.91□□□□□ -1.3
DDX39B-208ENST00000428098 FAM168BA1KXE4 195 aa6.91□□□□□ -1.3
DDX39B-208ENST00000428098 UBE2L6O14933 153 aa6.91□□□□□ -1.3
DDX39B-208ENST00000428098 FGF6P10767 208 aa6.91□□□□□ -1.3
DDX39B-208ENST00000428098 LRRC37A5PQ49AS3 106 aa6.91□□□□□ -1.3
DDX39B-208ENST00000428098 NUP35Q8NFH5 326 aa6.91□□□□□ -1.3
DDX39B-208ENST00000428098 IGLV4-69A0A075B6H9 119 aa6.9□□□□□ -1.3
DDX39B-208ENST00000428098 A6NHS1 94 aa6.9□□□□□ -1.3
DDX39B-208ENST00000428098 ZNF561-AS1K7EIQ3 104 aa6.9□□□□□ -1.3
DDX39B-208ENST00000428098 PLA2G10O15496 165 aa6.9□□□□□ -1.3
DDX39B-208ENST00000428098 SNAI2O43623 268 aa6.9□□□□□ -1.3
DDX39B-208ENST00000428098 CDC34P49427 236 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms