RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 AP1S3Q96PC3 154 aa13.9□□□□□ -0.18
HSPG2-205ENST00000427897 RNASE7Q9H1E1 156 aaKnown RBP13.9□□□□□ -0.18
HSPG2-205ENST00000427897 GZMBP10144 247 aa13.89□□□□□ -0.19
HSPG2-205ENST00000427897 FUSP35637 526 aaKnown RBP eCLIP13.89□□□□□ -0.19
HSPG2-205ENST00000427897 A0A087WX48 190 aa13.88□□□□□ -0.19
HSPG2-205ENST00000427897 TRAV8-3A0A0A6YYJ7 113 aa13.88□□□□□ -0.19
HSPG2-205ENST00000427897 GATCO43716 136 aaKnown RBP13.88□□□□□ -0.19
HSPG2-205ENST00000427897 RPL23P62829 140 aaKnown RBP13.88□□□□□ -0.19
HSPG2-205ENST00000427897 LAGE3Q14657 143 aa13.88□□□□□ -0.19
HSPG2-205ENST00000427897 ADIRFQ15847 76 aa13.88□□□□□ -0.19
HSPG2-205ENST00000427897 C15orf54Q8N8G6 183 aa13.88□□□□□ -0.19
HSPG2-205ENST00000427897 CACNG7P62955 275 aa13.87□□□□□ -0.19
HSPG2-205ENST00000427897 CT83Q5H943 113 aa13.87□□□□□ -0.19
HSPG2-205ENST00000427897 DAZ4Q86SG3 579 aaKnown RBP13.87□□□□□ -0.19
HSPG2-205ENST00000427897 MAPKAPK5-AS1Q8N8E1 139 aa13.87□□□□□ -0.19
HSPG2-205ENST00000427897 ISOC2Q96AB3 205 aa13.87□□□□□ -0.19
HSPG2-205ENST00000427897 DAZ3Q9NR90 486 aaKnown RBP13.87□□□□□ -0.19
HSPG2-205ENST00000427897 OSTCQ9NRP0 149 aa13.87□□□□□ -0.19
HSPG2-205ENST00000427897 TMEM262E9PQX1 116 aa13.86□□□□□ -0.19
HSPG2-205ENST00000427897 F2Z2F3 143 aa13.86□□□□□ -0.19
HSPG2-205ENST00000427897 MGPP08493 103 aa13.86□□□□□ -0.19
HSPG2-205ENST00000427897 UBE2D3P61077 147 aa13.86□□□□□ -0.19
HSPG2-205ENST00000427897 UBE2D2P62837 147 aa13.86□□□□□ -0.19
HSPG2-205ENST00000427897 KIAA1109Q2LD37 5005 aa13.85□□□□□ -0.19
HSPG2-205ENST00000427897 A8MWL6 223 aa13.85□□□□□ -0.19
HSPG2-205ENST00000427897 PNRC1Q12796 327 aaPredicted RBP13.85□□□□□ -0.19
HSPG2-205ENST00000427897 ELOBQ15370 118 aa13.85□□□□□ -0.19
HSPG2-205ENST00000427897 HERC2O95714 4834 aa13.84□□□□□ -0.19
HSPG2-205ENST00000427897 TMEM218A2RU14 115 aa13.84□□□□□ -0.19
HSPG2-205ENST00000427897 IGLC6P0CF74 106 aa13.84□□□□□ -0.19
HSPG2-205ENST00000427897 Q8N3U1 123 aa13.84□□□□□ -0.19
HSPG2-205ENST00000427897 NEXN-AS1Q8NBZ9 246 aa13.84□□□□□ -0.19
HSPG2-205ENST00000427897 RMI2Q96E14 147 aa13.84□□□□□ -0.19
HSPG2-205ENST00000427897 NIT1Q86X76 327 aa13.83□□□□□ -0.2
HSPG2-205ENST00000427897 OR10G8Q8NGN5 311 aa13.83□□□□□ -0.2
HSPG2-205ENST00000427897 IGLV5-52A0A0A0MRZ9 124 aa13.82□□□□□ -0.2
HSPG2-205ENST00000427897 H7C1H1 209 aa13.82□□□□□ -0.2
HSPG2-205ENST00000427897 TRGC1P0CF51 173 aa13.82□□□□□ -0.2
HSPG2-205ENST00000427897 TMEM97Q5BJF2 176 aa13.82□□□□□ -0.2
HSPG2-205ENST00000427897 LYZL1Q6UWQ5 148 aa13.82□□□□□ -0.2
HSPG2-205ENST00000427897 KLK12Q9UKR0 248 aa13.82□□□□□ -0.2
HSPG2-205ENST00000427897 COX11Q9Y6N1 276 aa13.82□□□□□ -0.2
HSPG2-205ENST00000427897 DNAH11Q96DT5 4516 aa13.81□□□□□ -0.2
HSPG2-205ENST00000427897 DYNC1H1Q14204 4646 aaKnown RBP13.81□□□□□ -0.2
HSPG2-205ENST00000427897 TRBV6-8A0A0A6YYG3 113 aa13.81□□□□□ -0.2
HSPG2-205ENST00000427897 F8W036 122 aa13.81□□□□□ -0.2
HSPG2-205ENST00000427897 GCSHP23434 173 aa13.81□□□□□ -0.2
HSPG2-205ENST00000427897 GFRA4Q9GZZ7 299 aa13.81□□□□□ -0.2
HSPG2-205ENST00000427897 FAM231BA6NCW3 169 aa13.8□□□□□ -0.2
HSPG2-205ENST00000427897 CTRLP40313 264 aa13.8□□□□□ -0.2
HSPG2-205ENST00000427897 TSKUQ8WUA8 353 aa13.8□□□□□ -0.2
HSPG2-205ENST00000427897 CHCHD5Q9BSY4 110 aa13.8□□□□□ -0.2
HSPG2-205ENST00000427897 CHCHD7Q9BUK0 85 aa13.8□□□□□ -0.2
HSPG2-205ENST00000427897 SEC11CQ9BY50 192 aa13.8□□□□□ -0.2
HSPG2-205ENST00000427897 IGKV2D-24A0A075B6R9 120 aa13.79□□□□□ -0.2
HSPG2-205ENST00000427897 LRCOL1A6NCL2 159 aa13.79□□□□□ -0.2
HSPG2-205ENST00000427897 NTF3P20783 257 aa13.79□□□□□ -0.2
HSPG2-205ENST00000427897 PKIAP61925 76 aa13.79□□□□□ -0.2
HSPG2-205ENST00000427897 TWIST1Q15672 202 aa13.79□□□□□ -0.2
HSPG2-205ENST00000427897 WDR73Q6P4I2 378 aa13.79□□□□□ -0.2
HSPG2-205ENST00000427897 Q8N814 137 aa13.79□□□□□ -0.2
HSPG2-205ENST00000427897 UBE2WQ96B02 151 aa13.79□□□□□ -0.2
HSPG2-205ENST00000427897 KIF25-AS1Q9Y6Z4 181 aa13.79□□□□□ -0.2
HSPG2-205ENST00000427897 V9GYV3 84 aa13.79□□□□□ -0.2
HSPG2-205ENST00000427897 PPP1R2P9O14990 202 aa13.78□□□□□ -0.2
HSPG2-205ENST00000427897 NTN5Q8WTR8 489 aaPredicted RBP13.78□□□□□ -0.2
HSPG2-205ENST00000427897 DNAJC30Q96LL9 226 aa13.78□□□□□ -0.2
HSPG2-205ENST00000427897 FOXA3P55318 350 aaPredicted RBP13.77□□□□□ -0.21
HSPG2-205ENST00000427897 SMIM15Q7Z3B0 74 aa13.77□□□□□ -0.21
HSPG2-205ENST00000427897 GTSF1Q8WW33 167 aa13.77□□□□□ -0.21
HSPG2-205ENST00000427897 BORCS7Q96B45 105 aa13.77□□□□□ -0.21
HSPG2-205ENST00000427897 CNFNQ9BYD5 112 aa13.77□□□□□ -0.21
HSPG2-205ENST00000427897 KRTAP17-1Q9BYP8 105 aa13.77□□□□□ -0.21
HSPG2-205ENST00000427897 DPH3P1Q9H4G8 78 aa13.77□□□□□ -0.21
HSPG2-205ENST00000427897 CRPP02741 224 aa13.76□□□□□ -0.21
HSPG2-205ENST00000427897 MT-ND4LP03901 98 aa13.76□□□□□ -0.21
HSPG2-205ENST00000427897 ADCYAP1P18509 176 aa13.76□□□□□ -0.21
HSPG2-205ENST00000427897 Q0VG73 95 aa13.76□□□□□ -0.21
HSPG2-205ENST00000427897 SUMO4Q6EEV6 95 aa13.76□□□□□ -0.21
HSPG2-205ENST00000427897 TRBV25-1A0A075B6N4 114 aa13.75□□□□□ -0.21
HSPG2-205ENST00000427897 HIGD1CA8MV81 97 aa13.75□□□□□ -0.21
HSPG2-205ENST00000427897 LECT2O14960 151 aa13.75□□□□□ -0.21
HSPG2-205ENST00000427897 ANGP03950 147 aaKnown RBP13.75□□□□□ -0.21
HSPG2-205ENST00000427897 RASL11AQ6T310 242 aa13.75□□□□□ -0.21
HSPG2-205ENST00000427897 M0QY20 66 aa13.74□□□□□ -0.21
HSPG2-205ENST00000427897 KRTAP10-1P60331 282 aa13.74□□□□□ -0.21
HSPG2-205ENST00000427897 Q8N1X5 172 aa13.74□□□□□ -0.21
HSPG2-205ENST00000427897 BAALCQ8WXS3 180 aa13.74□□□□□ -0.21
HSPG2-205ENST00000427897 ANAPC16Q96DE5 110 aa13.74□□□□□ -0.21
HSPG2-205ENST00000427897 PGLYRP4Q96LB8 373 aa13.74□□□□□ -0.21
HSPG2-205ENST00000427897 NAT8BQ9UHF3 227 aa13.74□□□□□ -0.21
HSPG2-205ENST00000427897 IGHV1-24A0A0C4DH33 117 aa13.72□□□□□ -0.21
HSPG2-205ENST00000427897 C10orf91Q5T1B1 145 aa13.72□□□□□ -0.21
HSPG2-205ENST00000427897 C1orf43Q9BWL3 253 aa13.72□□□□□ -0.21
HSPG2-205ENST00000427897 NIT2Q9NQR4 276 aa13.72□□□□□ -0.21
HSPG2-205ENST00000427897 CARHSP1Q9Y2V2 147 aaKnown RBP13.72□□□□□ -0.21
HSPG2-205ENST00000427897 A0A1B0GUT8 65 aa13.71□□□□□ -0.21
HSPG2-205ENST00000427897 SMIM27A0A1W2PRY6 76 aa13.71□□□□□ -0.21
HSPG2-205ENST00000427897 GAGE6Q13070 117 aa13.71□□□□□ -0.21
HSPG2-205ENST00000427897 NDUFA5Q16718 116 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms