RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 LCE2DQ5TA82 110 aaPredicted RBP9.96□□□□□ -0.82
RTN4-210ENST00000427710 SUMO4Q6EEV6 95 aa9.96□□□□□ -0.82
RTN4-210ENST00000427710 DNAJC30Q96LL9 226 aa9.96□□□□□ -0.82
RTN4-210ENST00000427710 SMIM7Q9BQ49 75 aa9.96□□□□□ -0.82
RTN4-210ENST00000427710 F2Z2F3 143 aa9.95□□□□□ -0.82
RTN4-210ENST00000427710 PSCAO43653 123 aa9.95□□□□□ -0.82
RTN4-210ENST00000427710 CTRLP40313 264 aa9.95□□□□□ -0.82
RTN4-210ENST00000427710 TEX261Q6UWH6 196 aa9.95□□□□□ -0.82
RTN4-210ENST00000427710 NIT1Q86X76 327 aa9.95□□□□□ -0.82
RTN4-210ENST00000427710 GTSF1Q8WW33 167 aa9.95□□□□□ -0.82
RTN4-210ENST00000427710 ZNF727A8MUV8 499 aa9.94□□□□□ -0.82
RTN4-210ENST00000427710 C9JQL5 133 aa9.94□□□□□ -0.82
RTN4-210ENST00000427710 EREGO14944 169 aa9.94□□□□□ -0.82
RTN4-210ENST00000427710 SRSF3P84103 164 aaKnown RBP9.94□□□□□ -0.82
RTN4-210ENST00000427710 TWIST1Q15672 202 aa9.94□□□□□ -0.82
RTN4-210ENST00000427710 M0QY20 66 aa9.93□□□□□ -0.82
RTN4-210ENST00000427710 TRGC1P0CF51 173 aa9.93□□□□□ -0.82
RTN4-210ENST00000427710 FOXA3P55318 350 aaPredicted RBP9.93□□□□□ -0.82
RTN4-210ENST00000427710 DEFB104AQ8WTQ1 72 aa9.93□□□□□ -0.82
RTN4-210ENST00000427710 PGLYRP4Q96LB8 373 aa9.93□□□□□ -0.82
RTN4-210ENST00000427710 DPH3P1Q9H4G8 78 aa9.93□□□□□ -0.82
RTN4-210ENST00000427710 KLK12Q9UKR0 248 aa9.93□□□□□ -0.82
RTN4-210ENST00000427710 TRBV6-8A0A0A6YYG3 113 aa9.92□□□□□ -0.82
RTN4-210ENST00000427710 LRCOL1A6NCL2 159 aa9.92□□□□□ -0.82
RTN4-210ENST00000427710 TMEM262E9PQX1 116 aa9.92□□□□□ -0.82
RTN4-210ENST00000427710 WDR73Q6P4I2 378 aa9.92□□□□□ -0.82
RTN4-210ENST00000427710 NTM-AS1Q6ZSK4 140 aa9.92□□□□□ -0.82
RTN4-210ENST00000427710 FAM231DQ6ZW35 169 aa9.92□□□□□ -0.82
RTN4-210ENST00000427710 LINC01551Q86U37 167 aa9.92□□□□□ -0.82
RTN4-210ENST00000427710 KRTAP17-1Q9BYP8 105 aa9.92□□□□□ -0.82
RTN4-210ENST00000427710 URGCP-MRPS24S4R325 110 aa9.92□□□□□ -0.82
RTN4-210ENST00000427710 TRAV26-2A0A0B4J265 109 aa9.91□□□□□ -0.82
RTN4-210ENST00000427710 WFDC2Q14508 124 aa9.91□□□□□ -0.82
RTN4-210ENST00000427710 A0A087WX48 190 aa9.9□□□□□ -0.82
RTN4-210ENST00000427710 NDUFS6O75380 124 aaKnown RBP9.9□□□□□ -0.82
RTN4-210ENST00000427710 LAGE3Q14657 143 aa9.9□□□□□ -0.82
RTN4-210ENST00000427710 RASL11AQ6T310 242 aa9.9□□□□□ -0.82
RTN4-210ENST00000427710 CHCHD5Q9BSY4 110 aa9.9□□□□□ -0.82
RTN4-210ENST00000427710 CNFNQ9BYD5 112 aa9.9□□□□□ -0.82
RTN4-210ENST00000427710 A8MWL6 223 aa9.89□□□□□ -0.83
RTN4-210ENST00000427710 LECT2O14960 151 aa9.89□□□□□ -0.83
RTN4-210ENST00000427710 GAGE6Q13070 117 aa9.89□□□□□ -0.83
RTN4-210ENST00000427710 MPV17L2Q567V2 206 aa9.89□□□□□ -0.83
RTN4-210ENST00000427710 UBE2WQ96B02 151 aa9.89□□□□□ -0.83
RTN4-210ENST00000427710 PGPEP1Q9NXJ5 209 aa9.89□□□□□ -0.83
RTN4-210ENST00000427710 TRAV8-3A0A0A6YYJ7 113 aa9.88□□□□□ -0.83
RTN4-210ENST00000427710 H7C1H1 209 aa9.88□□□□□ -0.83
RTN4-210ENST00000427710 RPL23P62829 140 aaKnown RBP9.88□□□□□ -0.83
RTN4-210ENST00000427710 KCNIP4Q6PIL6 250 aa9.88□□□□□ -0.83
RTN4-210ENST00000427710 MAPKAPK5-AS1Q8N8E1 139 aa9.88□□□□□ -0.83
RTN4-210ENST00000427710 C15orf54Q8N8G6 183 aa9.88□□□□□ -0.83
RTN4-210ENST00000427710 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.88□□□□□ -0.83
RTN4-210ENST00000427710 GATD1Q8NB37 220 aa9.88□□□□□ -0.83
RTN4-210ENST00000427710 OSTCQ9NRP0 149 aa9.88□□□□□ -0.83
RTN4-210ENST00000427710 IGKV2D-24A0A075B6R9 120 aa9.87□□□□□ -0.83
RTN4-210ENST00000427710 KRTAP10-1P60331 282 aa9.87□□□□□ -0.83
RTN4-210ENST00000427710 PEA15Q15121 130 aa9.87□□□□□ -0.83
RTN4-210ENST00000427710 ADIRFQ15847 76 aa9.87□□□□□ -0.83
RTN4-210ENST00000427710 TMEM241Q24JQ0 296 aa9.87□□□□□ -0.83
RTN4-210ENST00000427710 CT83Q5H943 113 aa9.87□□□□□ -0.83
RTN4-210ENST00000427710 ATRAIDQ6UW56 229 aa9.87□□□□□ -0.83
RTN4-210ENST00000427710 Q8N976 141 aa9.87□□□□□ -0.83
RTN4-210ENST00000427710 BAALCQ8WXS3 180 aa9.87□□□□□ -0.83
RTN4-210ENST00000427710 ISOC2Q96AB3 205 aa9.87□□□□□ -0.83
RTN4-210ENST00000427710 RPL39LQ96EH5 51 aaKnown RBP9.87□□□□□ -0.83
RTN4-210ENST00000427710 TM2D2Q9BX73 214 aa9.87□□□□□ -0.83
RTN4-210ENST00000427710 NIT2Q9NQR4 276 aa9.87□□□□□ -0.83
RTN4-210ENST00000427710 ABCA13Q86UQ4 5058 aa9.86□□□□□ -0.83
RTN4-210ENST00000427710 HIGD1CA8MV81 97 aa9.86□□□□□ -0.83
RTN4-210ENST00000427710 CLPSL2Q6UWE3 100 aa9.86□□□□□ -0.83
RTN4-210ENST00000427710 TSKUQ8WUA8 353 aa9.86□□□□□ -0.83
RTN4-210ENST00000427710 KRTAP4-5Q9BYR2 181 aa9.86□□□□□ -0.83
RTN4-210ENST00000427710 V9GYV3 84 aa9.86□□□□□ -0.83
RTN4-210ENST00000427710 TRBV25-1A0A075B6N4 114 aa9.85□□□□□ -0.83
RTN4-210ENST00000427710 IGHV1-24A0A0C4DH33 117 aa9.85□□□□□ -0.83
RTN4-210ENST00000427710 CDK2AP2O75956 126 aa9.85□□□□□ -0.83
RTN4-210ENST00000427710 ANGP03950 147 aaKnown RBP9.85□□□□□ -0.83
RTN4-210ENST00000427710 FAM74A3Q4VXF1 159 aa9.85□□□□□ -0.83
RTN4-210ENST00000427710 TMEM97Q5BJF2 176 aa9.85□□□□□ -0.83
RTN4-210ENST00000427710 ENHOQ6UWT2 76 aa9.85□□□□□ -0.83
RTN4-210ENST00000427710 SMIM15Q7Z3B0 74 aa9.85□□□□□ -0.83
RTN4-210ENST00000427710 Q8N814 137 aa9.85□□□□□ -0.83
RTN4-210ENST00000427710 CHCHD7Q9BUK0 85 aa9.85□□□□□ -0.83
RTN4-210ENST00000427710 FAT1Q14517 4588 aa9.84□□□□□ -0.83
RTN4-210ENST00000427710 IGLV5-52A0A0A0MRZ9 124 aa9.84□□□□□ -0.83
RTN4-210ENST00000427710 GAS8-AS1O95177 125 aa9.84□□□□□ -0.83
RTN4-210ENST00000427710 ELOBQ15370 118 aa9.84□□□□□ -0.83
RTN4-210ENST00000427710 CDPF1Q6NVV7 123 aa9.84□□□□□ -0.83
RTN4-210ENST00000427710 BORCS7Q96B45 105 aa9.84□□□□□ -0.83
RTN4-210ENST00000427710 NAT8Q9UHE5 227 aa9.84□□□□□ -0.83
RTN4-210ENST00000427710 A0A1B0GUT8 65 aa9.83□□□□□ -0.84
RTN4-210ENST00000427710 RBX1P62877 108 aa9.83□□□□□ -0.84
RTN4-210ENST00000427710 IQCJQ1A5X6 159 aa9.83□□□□□ -0.84
RTN4-210ENST00000427710 NUP35Q8NFH5 326 aa9.83□□□□□ -0.84
RTN4-210ENST00000427710 VPS13BQ7Z7G8 4022 aa9.83□□□□□ -0.84
RTN4-210ENST00000427710 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.82□□□□□ -0.84
RTN4-210ENST00000427710 CRPP02741 224 aa9.82□□□□□ -0.84
RTN4-210ENST00000427710 GCSHP23434 173 aa9.82□□□□□ -0.84
RTN4-210ENST00000427710 RMI2Q96E14 147 aa9.82□□□□□ -0.84
RTN4-210ENST00000427710 TMEM243Q9BU79 118 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms