RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 SYT8Q8NBV8 401 aa8.52□□□□□ -1.04
UBR4-207ENST00000425413 SPCS1Q9Y6A9 102 aa8.52□□□□□ -1.04
UBR4-207ENST00000425413 CRYGDP07320 174 aa8.52□□□□□ -1.05
UBR4-207ENST00000425413 C4orf3Q8WVX3 66 aa8.52□□□□□ -1.05
UBR4-207ENST00000425413 OPRPNQ99935 248 aaPredicted RBP8.52□□□□□ -1.05
UBR4-207ENST00000425413 AKAP9Q99996 3911 aa8.52□□□□□ -1.05
UBR4-207ENST00000425413 F8VRH5 84 aa8.52□□□□□ -1.05
UBR4-207ENST00000425413 H3BMM0 161 aa8.52□□□□□ -1.05
UBR4-207ENST00000425413 ZFP2Q6ZN57 461 aa8.52□□□□□ -1.05
UBR4-207ENST00000425413 Q8N2B8 174 aa8.52□□□□□ -1.05
UBR4-207ENST00000425413 KIR2DL4Q99706 377 aa8.52□□□□□ -1.05
UBR4-207ENST00000425413 PEMTQ9UBM1 199 aa8.52□□□□□ -1.05
UBR4-207ENST00000425413 HIVEP2P31629 2446 aa8.52□□□□□ -1.05
UBR4-207ENST00000425413 GCN1Q92616 2671 aaKnown RBP8.51□□□□□ -1.05
UBR4-207ENST00000425413 CD28P10747 220 aa8.51□□□□□ -1.05
UBR4-207ENST00000425413 CYSLTR1Q9Y271 337 aa8.51□□□□□ -1.05
UBR4-207ENST00000425413 SETXQ7Z333 2677 aaKnown RBP8.51□□□□□ -1.05
UBR4-207ENST00000425413 A0A1W2PPM0 123 aa8.51□□□□□ -1.05
UBR4-207ENST00000425413 K7EP34 96 aa8.51□□□□□ -1.05
UBR4-207ENST00000425413 SAMD5Q5TGI4 173 aa8.51□□□□□ -1.05
UBR4-207ENST00000425413 MORN3Q6PF18 240 aaPredicted RBP8.51□□□□□ -1.05
UBR4-207ENST00000425413 NEXN-AS1Q8NBZ9 246 aa8.51□□□□□ -1.05
UBR4-207ENST00000425413 ODF3Q96PU9 254 aa8.51□□□□□ -1.05
UBR4-207ENST00000425413 Q9UF83 564 aa8.51□□□□□ -1.05
UBR4-207ENST00000425413 FN1P02751 2386 aaKnown RBP8.5□□□□□ -1.05
UBR4-207ENST00000425413 FABP2P12104 132 aa8.5□□□□□ -1.05
UBR4-207ENST00000425413 PLNP26678 52 aa8.5□□□□□ -1.05
UBR4-207ENST00000425413 POLR2KP53803 58 aaKnown RBP8.5□□□□□ -1.05
UBR4-207ENST00000425413 RAX2Q96IS3 184 aa8.5□□□□□ -1.05
UBR4-207ENST00000425413 MAP6D1Q9H9H5 199 aa8.5□□□□□ -1.05
UBR4-207ENST00000425413 M0QY20 66 aa8.5□□□□□ -1.05
UBR4-207ENST00000425413 VCYO14598 125 aa8.5□□□□□ -1.05
UBR4-207ENST00000425413 PPP1R17O96001 155 aa8.5□□□□□ -1.05
UBR4-207ENST00000425413 XCL2Q9UBD3 114 aa8.5□□□□□ -1.05
UBR4-207ENST00000425413 TSHBP01222 138 aa8.49□□□□□ -1.05
UBR4-207ENST00000425413 HLA-DRB4P13762 266 aa8.49□□□□□ -1.05
UBR4-207ENST00000425413 DEFB114Q30KQ6 69 aa8.49□□□□□ -1.05
UBR4-207ENST00000425413 LINC01587Q99440 93 aa8.49□□□□□ -1.05
UBR4-207ENST00000425413 HIST1H4GQ99525 98 aa8.49□□□□□ -1.05
UBR4-207ENST00000425413 HLA-DRB4X5D2U9 266 aa8.49□□□□□ -1.05
UBR4-207ENST00000425413 K7ERU9 68 aa8.49□□□□□ -1.05
UBR4-207ENST00000425413 UFSP1Q6NVU6 142 aa8.49□□□□□ -1.05
UBR4-207ENST00000425413 CITED2Q99967 270 aaPredicted RBP8.49□□□□□ -1.05
UBR4-207ENST00000425413 SMR3AQ99954 134 aa8.49□□□□□ -1.05
UBR4-207ENST00000425413 TRGV11A0A075B6L2 103 aa8.48□□□□□ -1.05
UBR4-207ENST00000425413 OR11H12B2RN74 326 aa8.48□□□□□ -1.05
UBR4-207ENST00000425413 SCGB2A2Q13296 93 aa8.48□□□□□ -1.05
UBR4-207ENST00000425413 CEND1Q8N111 149 aa8.48□□□□□ -1.05
UBR4-207ENST00000425413 OR11H2Q8NH07 326 aa8.48□□□□□ -1.05
UBR4-207ENST00000425413 TRAV12-1A0A0B4J245 112 aa8.48□□□□□ -1.05
UBR4-207ENST00000425413 POM121L12Q8N7R1 296 aa8.48□□□□□ -1.05
UBR4-207ENST00000425413 HIGD1BQ9P298 99 aa8.48□□□□□ -1.05
UBR4-207ENST00000425413 RIPPLY3P57055 190 aa8.47□□□□□ -1.05
UBR4-207ENST00000425413 PRADC1Q9BSG0 188 aa8.47□□□□□ -1.05
UBR4-207ENST00000425413 MRPL16Q9NX20 251 aaKnown RBP8.47□□□□□ -1.05
UBR4-207ENST00000425413 C11orf86A6NJI1 115 aa8.47□□□□□ -1.05
UBR4-207ENST00000425413 CCL24O00175 119 aa8.47□□□□□ -1.05
UBR4-207ENST00000425413 RPL24P83731 157 aaKnown RBP8.46□□□□□ -1.05
UBR4-207ENST00000425413 SPAG8Q99932 426 aaPredicted RBP8.46□□□□□ -1.05
UBR4-207ENST00000425413 IGIPA6NJ69 53 aa8.46□□□□□ -1.06
UBR4-207ENST00000425413 J3QKU1 62 aa8.46□□□□□ -1.06
UBR4-207ENST00000425413 PLA2G2AP14555 144 aa8.46□□□□□ -1.06
UBR4-207ENST00000425413 TMEM170BQ5T4T1 132 aa8.46□□□□□ -1.06
UBR4-207ENST00000425413 Q6ZSN1 163 aa8.46□□□□□ -1.06
UBR4-207ENST00000425413 TRBV27A0A0K0K1C4 114 aa8.46□□□□□ -1.06
UBR4-207ENST00000425413 ODF3L2Q3SX64 289 aa8.46□□□□□ -1.06
UBR4-207ENST00000425413 RNASE13Q5GAN3 156 aaKnown RBP8.46□□□□□ -1.06
UBR4-207ENST00000425413 TRPT1Q86TN4 253 aaKnown RBP8.46□□□□□ -1.06
UBR4-207ENST00000425413 IGHV3-64A0A075B6Q5 118 aa8.45□□□□□ -1.06
UBR4-207ENST00000425413 KRTAP1-1Q07627 177 aa8.45□□□□□ -1.06
UBR4-207ENST00000425413 CEMP1Q6PRD7 247 aaPredicted RBP8.45□□□□□ -1.06
UBR4-207ENST00000425413 IGHV3-38A0A0C4DH36 116 aa8.45□□□□□ -1.06
UBR4-207ENST00000425413 AZU1P20160 251 aa8.45□□□□□ -1.06
UBR4-207ENST00000425413 WFDC10AQ9H1F0 79 aa8.45□□□□□ -1.06
UBR4-207ENST00000425413 ZNF815PA8K554 130 aa8.44□□□□□ -1.06
UBR4-207ENST00000425413 NSUN5P1Q3KNT7 163 aa8.44□□□□□ -1.06
UBR4-207ENST00000425413 SCGB1D4Q6XE38 83 aa8.44□□□□□ -1.06
UBR4-207ENST00000425413 LINC01006Q8NI28 216 aa8.44□□□□□ -1.06
UBR4-207ENST00000425413 IGLV4-69A0A075B6H9 119 aa8.44□□□□□ -1.06
UBR4-207ENST00000425413 MYMXA0A1B0GTQ4 84 aa8.44□□□□□ -1.06
UBR4-207ENST00000425413 PMVKQ15126 192 aa8.44□□□□□ -1.06
UBR4-207ENST00000425413 STHQ8IWL8 128 aa8.44□□□□□ -1.06
UBR4-207ENST00000425413 MTURNQ8N3F0 131 aa8.44□□□□□ -1.06
UBR4-207ENST00000425413 OR5A1Q8NGJ0 315 aa8.44□□□□□ -1.06
UBR4-207ENST00000425413 PHLDA1Q8WV24 401 aaPredicted RBP8.44□□□□□ -1.06
UBR4-207ENST00000425413 C12orf74Q32Q52 190 aa8.43□□□□□ -1.06
UBR4-207ENST00000425413 PLEKHB2Q96CS7 222 aa8.43□□□□□ -1.06
UBR4-207ENST00000425413 TM2D2Q9BX73 214 aa8.43□□□□□ -1.06
UBR4-207ENST00000425413 TRBV6-5A0A0K0K1A5 114 aa8.43□□□□□ -1.06
UBR4-207ENST00000425413 SFTA2Q6UW10 78 aa8.43□□□□□ -1.06
UBR4-207ENST00000425413 TMEM86BQ8N661 226 aa8.43□□□□□ -1.06
UBR4-207ENST00000425413 ZNRF2Q8NHG8 242 aa8.43□□□□□ -1.06
UBR4-207ENST00000425413 ZNF479Q96JC4 524 aa8.43□□□□□ -1.06
UBR4-207ENST00000425413 M0R2P5 195 aa8.43□□□□□ -1.06
UBR4-207ENST00000425413 IGHV3-53P01767 116 aa8.43□□□□□ -1.06
UBR4-207ENST00000425413 KMT2BQ9UMN6 2715 aaPredicted RBP8.42□□□□□ -1.06
UBR4-207ENST00000425413 IGLL5B9A064 214 aa8.42□□□□□ -1.06
UBR4-207ENST00000425413 I3L3M4 83 aa8.42□□□□□ -1.06
UBR4-207ENST00000425413 ZNF415Q09FC8 603 aa8.42□□□□□ -1.06
UBR4-207ENST00000425413 TNFRSF18Q9Y5U5 241 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms