RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 Q0VG73 95 aa11.61□□□□□ -0.55
GPC1-203ENST00000425056 PRR27Q6MZM9 219 aa11.61□□□□□ -0.55
GPC1-203ENST00000425056 NEXN-AS1Q8NBZ9 246 aa11.61□□□□□ -0.55
GPC1-203ENST00000425056 ZNF56Q15929 161 aa11.6□□□□□ -0.55
GPC1-203ENST00000425056 SSBP4Q9BWG4 385 aaPredicted RBP11.6□□□□□ -0.55
GPC1-203ENST00000425056 OR5AL1P0C617 328 aa11.59□□□□□ -0.55
GPC1-203ENST00000425056 A0A1B0GV50 99 aa11.58□□□□□ -0.56
GPC1-203ENST00000425056 MPV17L2Q567V2 206 aa11.58□□□□□ -0.56
GPC1-203ENST00000425056 BAGE2Q86Y30 109 aa11.58□□□□□ -0.56
GPC1-203ENST00000425056 CHAC1Q9BUX1 264 aa11.58□□□□□ -0.56
GPC1-203ENST00000425056 C1orf43Q9BWL3 253 aa11.58□□□□□ -0.56
GPC1-203ENST00000425056 J3QL48 77 aa11.57□□□□□ -0.56
GPC1-203ENST00000425056 RAB14P61106 215 aa11.57□□□□□ -0.56
GPC1-203ENST00000425056 IFITM2Q01629 132 aa11.57□□□□□ -0.56
GPC1-203ENST00000425056 C14orf177Q52M58 125 aa11.57□□□□□ -0.56
GPC1-203ENST00000425056 ENHOQ6UWT2 76 aa11.57□□□□□ -0.56
GPC1-203ENST00000425056 LYPD6BQ8NI32 183 aa11.57□□□□□ -0.56
GPC1-203ENST00000425056 DEFB104AQ8WTQ1 72 aa11.57□□□□□ -0.56
GPC1-203ENST00000425056 MANBALQ9NQG1 85 aa11.57□□□□□ -0.56
GPC1-203ENST00000425056 KRTAP29-1A8MX34 341 aaPredicted RBP11.56□□□□□ -0.56
GPC1-203ENST00000425056 TMEM262E9PQX1 116 aa11.56□□□□□ -0.56
GPC1-203ENST00000425056 IFNA1P01562 189 aa11.56□□□□□ -0.56
GPC1-203ENST00000425056 CRPP02741 224 aa11.56□□□□□ -0.56
GPC1-203ENST00000425056 PKIAP61925 76 aa11.56□□□□□ -0.56
GPC1-203ENST00000425056 SPANXN1Q5VSR9 72 aa11.56□□□□□ -0.56
GPC1-203ENST00000425056 C15orf54Q8N8G6 183 aa11.56□□□□□ -0.56
GPC1-203ENST00000425056 VAX2Q9UIW0 290 aa11.56□□□□□ -0.56
GPC1-203ENST00000425056 TAGLN2P37802 199 aaKnown RBP11.55□□□□□ -0.56
GPC1-203ENST00000425056 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.55□□□□□ -0.56
GPC1-203ENST00000425056 MUC21A0A0G2JKD1 596 aa11.54□□□□□ -0.56
GPC1-203ENST00000425056 MUC21A0A140T8X8 626 aa11.54□□□□□ -0.56
GPC1-203ENST00000425056 ANGP03950 147 aaKnown RBP11.54□□□□□ -0.56
GPC1-203ENST00000425056 KRTAP10-4P60372 401 aaPredicted RBP11.54□□□□□ -0.56
GPC1-203ENST00000425056 CCL20P78556 96 aa11.54□□□□□ -0.56
GPC1-203ENST00000425056 TMEM97Q5BJF2 176 aa11.54□□□□□ -0.56
GPC1-203ENST00000425056 CIRBP-AS1Q8TBR5 109 aa11.54□□□□□ -0.56
GPC1-203ENST00000425056 AP1S3Q96PC3 154 aa11.54□□□□□ -0.56
GPC1-203ENST00000425056 CHCHD5Q9BSY4 110 aa11.54□□□□□ -0.56
GPC1-203ENST00000425056 GNG13Q9P2W3 67 aa11.54□□□□□ -0.56
GPC1-203ENST00000425056 KIF25-AS1Q9Y6Z4 181 aa11.54□□□□□ -0.56
GPC1-203ENST00000425056 F5H697 171 aa11.53□□□□□ -0.56
GPC1-203ENST00000425056 RPL35P42766 123 aaKnown RBP11.53□□□□□ -0.56
GPC1-203ENST00000425056 MIAQ16674 131 aa11.53□□□□□ -0.56
GPC1-203ENST00000425056 NTM-AS1Q6ZSK4 140 aa11.53□□□□□ -0.56
GPC1-203ENST00000425056 C11orf52Q96A22 123 aa11.53□□□□□ -0.56
GPC1-203ENST00000425056 PRR34Q9NV39 138 aa11.52□□□□□ -0.57
GPC1-203ENST00000425056 USP17L23D6RBM5 183 aa11.51□□□□□ -0.57
GPC1-203ENST00000425056 IGLV2-8P01709 118 aa11.51□□□□□ -0.57
GPC1-203ENST00000425056 HLA-DQA1P01909 254 aa11.51□□□□□ -0.57
GPC1-203ENST00000425056 SMIM17P0DL12 118 aa11.51□□□□□ -0.57
GPC1-203ENST00000425056 BCL2P10415 239 aa11.51□□□□□ -0.57
GPC1-203ENST00000425056 CLLU1Q5K131 121 aa11.51□□□□□ -0.57
GPC1-203ENST00000425056 DERL1Q9BUN8 251 aa11.51□□□□□ -0.57
GPC1-203ENST00000425056 TRBV25-1A0A075B6N4 114 aa11.49□□□□□ -0.57
GPC1-203ENST00000425056 IGLC6P0CF74 106 aa11.49□□□□□ -0.57
GPC1-203ENST00000425056 SSTP61278 116 aa11.49□□□□□ -0.57
GPC1-203ENST00000425056 RBX1P62877 108 aa11.49□□□□□ -0.57
GPC1-203ENST00000425056 MEF2BQ02080 365 aaPredicted RBP11.49□□□□□ -0.57
GPC1-203ENST00000425056 CENPWQ5EE01 88 aa11.49□□□□□ -0.57
GPC1-203ENST00000425056 IQCJQ1A5X6 159 aa11.48□□□□□ -0.57
GPC1-203ENST00000425056 KRTAP26-1Q6PEX3 210 aa11.48□□□□□ -0.57
GPC1-203ENST00000425056 FER1L6-AS1Q8NA97 138 aa11.48□□□□□ -0.57
GPC1-203ENST00000425056 FAM210AQ96ND0 272 aa11.48□□□□□ -0.57
GPC1-203ENST00000425056 LRP1Q07954 4544 aaKnown RBP11.48□□□□□ -0.57
GPC1-203ENST00000425056 M0QY20 66 aa11.47□□□□□ -0.57
GPC1-203ENST00000425056 PDE6DO43924 150 aa11.47□□□□□ -0.57
GPC1-203ENST00000425056 PRSS1P07477 247 aa11.47□□□□□ -0.57
GPC1-203ENST00000425056 GZMBP10144 247 aa11.47□□□□□ -0.57
GPC1-203ENST00000425056 GAGE6Q13070 117 aa11.47□□□□□ -0.57
GPC1-203ENST00000425056 CLPSL2Q6UWE3 100 aa11.47□□□□□ -0.57
GPC1-203ENST00000425056 SMIM12Q96EX1 92 aa11.47□□□□□ -0.57
GPC1-203ENST00000425056 IGHV1-24A0A0C4DH33 117 aa11.46□□□□□ -0.57
GPC1-203ENST00000425056 C19orf71A6NCJ1 209 aa11.46□□□□□ -0.57
GPC1-203ENST00000425056 H7C1H1 209 aa11.46□□□□□ -0.57
GPC1-203ENST00000425056 NDUFS6O75380 124 aaKnown RBP11.46□□□□□ -0.57
GPC1-203ENST00000425056 MGPP08493 103 aa11.46□□□□□ -0.57
GPC1-203ENST00000425056 RPS20P60866 119 aaKnown RBP11.46□□□□□ -0.57
GPC1-203ENST00000425056 DGAT2L7PQ6IED9 249 aa11.46□□□□□ -0.57
GPC1-203ENST00000425056 LINC00269Q8N2A0 174 aa11.46□□□□□ -0.57
GPC1-203ENST00000425056 OR2D3Q8NGH3 330 aa11.46□□□□□ -0.57
GPC1-203ENST00000425056 TPPP3Q9BW30 176 aa11.46□□□□□ -0.57
GPC1-203ENST00000425056 EIF5A2Q9GZV4 153 aaKnown RBP11.46□□□□□ -0.57
GPC1-203ENST00000425056 CACNG7P62955 275 aa11.45□□□□□ -0.58
GPC1-203ENST00000425056 SUMO4Q6EEV6 95 aa11.45□□□□□ -0.58
GPC1-203ENST00000425056 DAZAP1Q96EP5 407 aaKnown RBP11.45□□□□□ -0.58
GPC1-203ENST00000425056 C9orf163Q8N9P6 203 aa11.44□□□□□ -0.58
GPC1-203ENST00000425056 SMDT1Q9H4I9 107 aa11.44□□□□□ -0.58
GPC1-203ENST00000425056 TMEM250H0YL14 139 aa11.43□□□□□ -0.58
GPC1-203ENST00000425056 GNG4P50150 75 aa11.43□□□□□ -0.58
GPC1-203ENST00000425056 REG3AQ06141 175 aa11.43□□□□□ -0.58
GPC1-203ENST00000425056 PEA15Q15121 130 aa11.43□□□□□ -0.58
GPC1-203ENST00000425056 MED9Q9NWA0 146 aa11.43□□□□□ -0.58
GPC1-203ENST00000425056 FAT3Q8TDW7 4589 aa11.42□□□□□ -0.58
GPC1-203ENST00000425056 TRBV20OR9-2A0A075B6H5 130 aa11.42□□□□□ -0.58
GPC1-203ENST00000425056 XKRY2A2RUG3 117 aa11.42□□□□□ -0.58
GPC1-203ENST00000425056 RAB19A4D1S5 217 aa11.42□□□□□ -0.58
GPC1-203ENST00000425056 F2Z2F3 143 aa11.42□□□□□ -0.58
GPC1-203ENST00000425056 OXTP01178 125 aa11.42□□□□□ -0.58
GPC1-203ENST00000425056 P01737 135 aa11.42□□□□□ -0.58
GPC1-203ENST00000425056 C20orf203Q8NBC4 194 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms