RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 MUC21A0A140T8X8 626 aa10.58□□□□□ -0.72
COL18A1-205ENST00000423214 KRTAP29-1A8MX34 341 aaPredicted RBP10.58□□□□□ -0.72
COL18A1-205ENST00000423214 TEX46H3BTG2 121 aa10.58□□□□□ -0.72
COL18A1-205ENST00000423214 UBE2D3P61077 147 aa10.58□□□□□ -0.72
COL18A1-205ENST00000423214 UBE2D2P62837 147 aa10.58□□□□□ -0.72
COL18A1-205ENST00000423214 AKAP14Q86UN6 197 aa10.58□□□□□ -0.72
COL18A1-205ENST00000423214 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.58□□□□□ -0.72
COL18A1-205ENST00000423214 CHAC1Q9BUX1 264 aa10.58□□□□□ -0.72
COL18A1-205ENST00000423214 RAB19A4D1S5 217 aa10.57□□□□□ -0.72
COL18A1-205ENST00000423214 TMEM262E9PQX1 116 aa10.57□□□□□ -0.72
COL18A1-205ENST00000423214 ATRAIDQ6UW56 229 aa10.57□□□□□ -0.72
COL18A1-205ENST00000423214 OR10AG1Q8NH19 301 aa10.57□□□□□ -0.72
COL18A1-205ENST00000423214 C11orf52Q96A22 123 aa10.57□□□□□ -0.72
COL18A1-205ENST00000423214 A0A1B0GVG6 124 aa10.56□□□□□ -0.72
COL18A1-205ENST00000423214 CENPWQ5EE01 88 aa10.56□□□□□ -0.72
COL18A1-205ENST00000423214 C9orf62Q8N4C0 152 aa10.56□□□□□ -0.72
COL18A1-205ENST00000423214 TRBV6-8A0A0A6YYG3 113 aa10.55□□□□□ -0.72
COL18A1-205ENST00000423214 IGLV2-8P01709 118 aa10.55□□□□□ -0.72
COL18A1-205ENST00000423214 ANGP03950 147 aaKnown RBP10.55□□□□□ -0.72
COL18A1-205ENST00000423214 RAB4BP61018 213 aa10.55□□□□□ -0.72
COL18A1-205ENST00000423214 MEF2BQ02080 365 aaPredicted RBP10.55□□□□□ -0.72
COL18A1-205ENST00000423214 C15orf54Q8N8G6 183 aa10.55□□□□□ -0.72
COL18A1-205ENST00000423214 MED9Q9NWA0 146 aa10.55□□□□□ -0.72
COL18A1-205ENST00000423214 HLA-DQA1P01909 254 aa10.54□□□□□ -0.72
COL18A1-205ENST00000423214 GZMBP10144 247 aa10.54□□□□□ -0.72
COL18A1-205ENST00000423214 PKIAP61925 76 aa10.54□□□□□ -0.72
COL18A1-205ENST00000423214 MPV17L2Q567V2 206 aa10.54□□□□□ -0.72
COL18A1-205ENST00000423214 OR10G8Q8NGN5 311 aa10.54□□□□□ -0.72
COL18A1-205ENST00000423214 CIRBP-AS1Q8TBR5 109 aa10.54□□□□□ -0.72
COL18A1-205ENST00000423214 CHCHD5Q9BSY4 110 aa10.54□□□□□ -0.72
COL18A1-205ENST00000423214 SSBP4Q9BWG4 385 aaPredicted RBP10.54□□□□□ -0.72
COL18A1-205ENST00000423214 SNAI2O43623 268 aa10.53□□□□□ -0.72
COL18A1-205ENST00000423214 IFNA1P01562 189 aa10.53□□□□□ -0.72
COL18A1-205ENST00000423214 CXCL1P09341 107 aa10.53□□□□□ -0.72
COL18A1-205ENST00000423214 BCL2P10415 239 aa10.53□□□□□ -0.72
COL18A1-205ENST00000423214 SPANXN1Q5VSR9 72 aa10.53□□□□□ -0.72
COL18A1-205ENST00000423214 NEXN-AS1Q8NBZ9 246 aa10.53□□□□□ -0.72
COL18A1-205ENST00000423214 PDE6DO43924 150 aa10.52□□□□□ -0.73
COL18A1-205ENST00000423214 GNG4P50150 75 aa10.52□□□□□ -0.73
COL18A1-205ENST00000423214 ALKAL2Q6UX46 152 aa10.52□□□□□ -0.73
COL18A1-205ENST00000423214 DAZAP1Q96EP5 407 aaKnown RBP10.52□□□□□ -0.73
COL18A1-205ENST00000423214 VAX2Q9UIW0 290 aa10.52□□□□□ -0.73
COL18A1-205ENST00000423214 F5H697 171 aa10.51□□□□□ -0.73
COL18A1-205ENST00000423214 OR5AL1P0C617 328 aa10.51□□□□□ -0.73
COL18A1-205ENST00000423214 TMEM97Q5BJF2 176 aa10.51□□□□□ -0.73
COL18A1-205ENST00000423214 ENHOQ6UWT2 76 aa10.51□□□□□ -0.73
COL18A1-205ENST00000423214 OR2D3Q8NGH3 330 aa10.51□□□□□ -0.73
COL18A1-205ENST00000423214 TPPP3Q9BW30 176 aa10.51□□□□□ -0.73
COL18A1-205ENST00000423214 TRBV20OR9-2A0A075B6H5 130 aa10.5□□□□□ -0.73
COL18A1-205ENST00000423214 USP17L23D6RBM5 183 aa10.5□□□□□ -0.73
COL18A1-205ENST00000423214 SMIM17P0DL12 118 aa10.5□□□□□ -0.73
COL18A1-205ENST00000423214 MIAQ16674 131 aa10.5□□□□□ -0.73
COL18A1-205ENST00000423214 AP1S3Q96PC3 154 aa10.5□□□□□ -0.73
COL18A1-205ENST00000423214 C19orf71A6NCJ1 209 aa10.49□□□□□ -0.73
COL18A1-205ENST00000423214 NKX2-5P52952 324 aaPredicted RBP10.49□□□□□ -0.73
COL18A1-205ENST00000423214 CLPSL2Q6UWE3 100 aa10.49□□□□□ -0.73
COL18A1-205ENST00000423214 TRBV25-1A0A075B6N4 114 aa10.48□□□□□ -0.73
COL18A1-205ENST00000423214 OXTP01178 125 aa10.48□□□□□ -0.73
COL18A1-205ENST00000423214 KRTAP10-4P60372 401 aaPredicted RBP10.48□□□□□ -0.73
COL18A1-205ENST00000423214 RPL37AP61513 92 aaKnown RBP10.48□□□□□ -0.73
COL18A1-205ENST00000423214 SERTAD4-AS1Q5TG53 156 aa10.48□□□□□ -0.73
COL18A1-205ENST00000423214 FER1L6-AS1Q8NA97 138 aa10.48□□□□□ -0.73
COL18A1-205ENST00000423214 LRP1Q07954 4544 aaKnown RBP10.48□□□□□ -0.73
COL18A1-205ENST00000423214 PKHD1L1Q86WI1 4243 aa10.48□□□□□ -0.73
COL18A1-205ENST00000423214 P01737 135 aa10.47□□□□□ -0.73
COL18A1-205ENST00000423214 IGLC6P0CF74 106 aa10.47□□□□□ -0.73
COL18A1-205ENST00000423214 RPS20P60866 119 aaKnown RBP10.47□□□□□ -0.73
COL18A1-205ENST00000423214 SMIM12Q96EX1 92 aa10.47□□□□□ -0.73
COL18A1-205ENST00000423214 KIF25-AS1Q9Y6Z4 181 aa10.47□□□□□ -0.73
COL18A1-205ENST00000423214 MGPP08493 103 aa10.46□□□□□ -0.73
COL18A1-205ENST00000423214 TAGLN2P37802 199 aaKnown RBP10.46□□□□□ -0.73
COL18A1-205ENST00000423214 BLOC1S1P78537 153 aa10.46□□□□□ -0.73
COL18A1-205ENST00000423214 GAGE6Q13070 117 aa10.46□□□□□ -0.73
COL18A1-205ENST00000423214 NUDT10Q8NFP7 164 aa10.46□□□□□ -0.73
COL18A1-205ENST00000423214 OCC1Q8TAD7 63 aa10.46□□□□□ -0.73
COL18A1-205ENST00000423214 NUDT11Q96G61 164 aa10.46□□□□□ -0.73
COL18A1-205ENST00000423214 FAT3Q8TDW7 4589 aa10.45□□□□□ -0.74
COL18A1-205ENST00000423214 DGAT2L7PQ6IED9 249 aa10.45□□□□□ -0.74
COL18A1-205ENST00000423214 IGHV1-24A0A0C4DH33 117 aa10.44□□□□□ -0.74
COL18A1-205ENST00000423214 K7EN84 100 aa10.44□□□□□ -0.74
COL18A1-205ENST00000423214 PRSS1P07477 247 aa10.44□□□□□ -0.74
COL18A1-205ENST00000423214 RBX1P62877 108 aa10.44□□□□□ -0.74
COL18A1-205ENST00000423214 LYZL1Q6UWQ5 148 aa10.44□□□□□ -0.74
COL18A1-205ENST00000423214 NTM-AS1Q6ZSK4 140 aa10.44□□□□□ -0.74
COL18A1-205ENST00000423214 LINC00269Q8N2A0 174 aa10.44□□□□□ -0.74
COL18A1-205ENST00000423214 RNASE7Q9H1E1 156 aaKnown RBP10.44□□□□□ -0.74
COL18A1-205ENST00000423214 BIN3Q9NQY0 253 aa10.44□□□□□ -0.74
COL18A1-205ENST00000423214 PRR34Q9NV39 138 aa10.44□□□□□ -0.74
COL18A1-205ENST00000423214 XKRY2A2RUG3 117 aa10.43□□□□□ -0.74
COL18A1-205ENST00000423214 H7C1H1 209 aa10.43□□□□□ -0.74
COL18A1-205ENST00000423214 CEBPGP53567 150 aa10.43□□□□□ -0.74
COL18A1-205ENST00000423214 CACNG7P62955 275 aa10.43□□□□□ -0.74
COL18A1-205ENST00000423214 F2Z2F3 143 aa10.42□□□□□ -0.74
COL18A1-205ENST00000423214 NTF3P20783 257 aa10.42□□□□□ -0.74
COL18A1-205ENST00000423214 IQCJQ1A5X6 159 aa10.42□□□□□ -0.74
COL18A1-205ENST00000423214 C9orf163Q8N9P6 203 aa10.42□□□□□ -0.74
COL18A1-205ENST00000423214 LYPD6BQ8NI32 183 aa10.42□□□□□ -0.74
COL18A1-205ENST00000423214 REG3AQ06141 175 aa10.41□□□□□ -0.74
COL18A1-205ENST00000423214 IGLV10-54A0A075B6I4 117 aa10.4□□□□□ -0.74
COL18A1-205ENST00000423214 M0QY20 66 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 212.2 ms