RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 INAFM2P0DMQ5 153 aa6.28□□□□□ -1.4
NUP50-205ENST00000419387 CENPWQ5EE01 88 aa6.28□□□□□ -1.4
NUP50-205ENST00000419387 TOR2AQ5JU69 321 aa6.28□□□□□ -1.4
NUP50-205ENST00000419387 FAM74A4Q5TZK3 123 aa6.28□□□□□ -1.4
NUP50-205ENST00000419387 OCC1Q8TAD7 63 aa6.28□□□□□ -1.4
NUP50-205ENST00000419387 MED9Q9NWA0 146 aa6.28□□□□□ -1.4
NUP50-205ENST00000419387 TMSB15BA0A087X1C1 80 aa6.27□□□□□ -1.41
NUP50-205ENST00000419387 SMR3BP02814 79 aaPredicted RBP6.27□□□□□ -1.41
NUP50-205ENST00000419387 Q5VSD8 79 aa6.27□□□□□ -1.41
NUP50-205ENST00000419387 DAZ4Q86SG3 579 aaKnown RBP6.27□□□□□ -1.41
NUP50-205ENST00000419387 ZFP82Q8N141 532 aa6.27□□□□□ -1.41
NUP50-205ENST00000419387 TMEM70Q9BUB7 260 aa6.27□□□□□ -1.41
NUP50-205ENST00000419387 DAZ3Q9NR90 486 aaKnown RBP6.27□□□□□ -1.41
NUP50-205ENST00000419387 VPS13BQ7Z7G8 4022 aa6.27□□□□□ -1.41
NUP50-205ENST00000419387 A0A087WWL8 130 aa6.26□□□□□ -1.41
NUP50-205ENST00000419387 M0R381 172 aa6.26□□□□□ -1.41
NUP50-205ENST00000419387 RPL19P84098 196 aaKnown RBP6.26□□□□□ -1.41
NUP50-205ENST00000419387 CLLU1Q5K131 121 aa6.26□□□□□ -1.41
NUP50-205ENST00000419387 SMIM12Q96EX1 92 aa6.26□□□□□ -1.41
NUP50-205ENST00000419387 EIF5A2Q9GZV4 153 aaKnown RBP6.26□□□□□ -1.41
NUP50-205ENST00000419387 FAT1Q14517 4588 aa6.26□□□□□ -1.41
NUP50-205ENST00000419387 DNAH8Q96JB1 4490 aa6.25□□□□□ -1.41
NUP50-205ENST00000419387 TRBV10-1A0A0K0K1A3 114 aa6.25□□□□□ -1.41
NUP50-205ENST00000419387 GNG4P50150 75 aa6.25□□□□□ -1.41
NUP50-205ENST00000419387 RPL36AP83881 106 aaKnown RBP6.25□□□□□ -1.41
NUP50-205ENST00000419387 WFDC2Q14508 124 aa6.25□□□□□ -1.41
NUP50-205ENST00000419387 NIT1Q86X76 327 aa6.25□□□□□ -1.41
NUP50-205ENST00000419387 RPL36ALQ969Q0 106 aaKnown RBP6.25□□□□□ -1.41
NUP50-205ENST00000419387 COX11Q9Y6N1 276 aa6.25□□□□□ -1.41
NUP50-205ENST00000419387 URGCP-MRPS24S4R325 110 aa6.25□□□□□ -1.41
NUP50-205ENST00000419387 TRBV7-3A0A075B6L6 115 aa6.24□□□□□ -1.41
NUP50-205ENST00000419387 CXCL1P09341 107 aa6.24□□□□□ -1.41
NUP50-205ENST00000419387 UBE2D3P61077 147 aa6.24□□□□□ -1.41
NUP50-205ENST00000419387 UBE2D2P62837 147 aa6.24□□□□□ -1.41
NUP50-205ENST00000419387 HAMPP81172 84 aa6.24□□□□□ -1.41
NUP50-205ENST00000419387 NUDT10Q8NFP7 164 aa6.24□□□□□ -1.41
NUP50-205ENST00000419387 RMI2Q96E14 147 aa6.24□□□□□ -1.41
NUP50-205ENST00000419387 NUDT11Q96G61 164 aa6.24□□□□□ -1.41
NUP50-205ENST00000419387 SMDT1Q9H4I9 107 aa6.24□□□□□ -1.41
NUP50-205ENST00000419387 FAM30AQ9NZY2 134 aa6.24□□□□□ -1.41
NUP50-205ENST00000419387 LECT2O14960 151 aa6.23□□□□□ -1.41
NUP50-205ENST00000419387 IGLC6P0CF74 106 aa6.23□□□□□ -1.41
NUP50-205ENST00000419387 RAB4BP61018 213 aa6.23□□□□□ -1.41
NUP50-205ENST00000419387 ELOBQ15370 118 aa6.23□□□□□ -1.41
NUP50-205ENST00000419387 PRR27Q6MZM9 219 aa6.23□□□□□ -1.41
NUP50-205ENST00000419387 KCNIP4Q6PIL6 250 aa6.23□□□□□ -1.41
NUP50-205ENST00000419387 LINC01551Q86U37 167 aa6.23□□□□□ -1.41
NUP50-205ENST00000419387 OR10G8Q8NGN5 311 aa6.23□□□□□ -1.41
NUP50-205ENST00000419387 BAALCQ8WXS3 180 aa6.23□□□□□ -1.41
NUP50-205ENST00000419387 CHCHD7Q9BUK0 85 aa6.23□□□□□ -1.41
NUP50-205ENST00000419387 RNASE7Q9H1E1 156 aaKnown RBP6.23□□□□□ -1.41
NUP50-205ENST00000419387 KLK12Q9UKR0 248 aa6.23□□□□□ -1.41
NUP50-205ENST00000419387 IGKV2D-24A0A075B6R9 120 aa6.22□□□□□ -1.41
NUP50-205ENST00000419387 A0A087WX48 190 aa6.22□□□□□ -1.41
NUP50-205ENST00000419387 SNAI2O43623 268 aa6.22□□□□□ -1.41
NUP50-205ENST00000419387 GZMBP10144 247 aa6.22□□□□□ -1.41
NUP50-205ENST00000419387 Q8N976 141 aa6.22□□□□□ -1.41
NUP50-205ENST00000419387 OR10AG1Q8NH19 301 aa6.22□□□□□ -1.41
NUP50-205ENST00000419387 DNAJC30Q96LL9 226 aa6.22□□□□□ -1.41
NUP50-205ENST00000419387 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.21□□□□□ -1.42
NUP50-205ENST00000419387 TRBV6-8A0A0A6YYG3 113 aa6.21□□□□□ -1.42
NUP50-205ENST00000419387 ZNF727A8MUV8 499 aa6.21□□□□□ -1.42
NUP50-205ENST00000419387 TMEM262E9PQX1 116 aa6.21□□□□□ -1.42
NUP50-205ENST00000419387 OR5AL1P0C617 328 aa6.21□□□□□ -1.42
NUP50-205ENST00000419387 Q0VG73 95 aa6.21□□□□□ -1.42
NUP50-205ENST00000419387 PEA15Q15121 130 aa6.21□□□□□ -1.42
NUP50-205ENST00000419387 ZNF56Q15929 161 aa6.21□□□□□ -1.42
NUP50-205ENST00000419387 SPANXN1Q5VSR9 72 aa6.21□□□□□ -1.42
NUP50-205ENST00000419387 FAM231DQ6ZW35 169 aa6.21□□□□□ -1.42
NUP50-205ENST00000419387 NEXN-AS1Q8NBZ9 246 aa6.21□□□□□ -1.42
NUP50-205ENST00000419387 UBE2WQ96B02 151 aa6.21□□□□□ -1.42
NUP50-205ENST00000419387 SMIM7Q9BQ49 75 aa6.21□□□□□ -1.42
NUP50-205ENST00000419387 MUC21A0A0G2JKD1 596 aa6.2□□□□□ -1.42
NUP50-205ENST00000419387 MUC21A0A140T8X8 626 aa6.2□□□□□ -1.42
NUP50-205ENST00000419387 CEBPGP53567 150 aa6.2□□□□□ -1.42
NUP50-205ENST00000419387 RPL23P62829 140 aaKnown RBP6.2□□□□□ -1.42
NUP50-205ENST00000419387 TMEM241Q24JQ0 296 aa6.2□□□□□ -1.42
NUP50-205ENST00000419387 ATRAIDQ6UW56 229 aa6.2□□□□□ -1.42
NUP50-205ENST00000419387 Q6ZSA8 131 aa6.2□□□□□ -1.42
NUP50-205ENST00000419387 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.2□□□□□ -1.42
NUP50-205ENST00000419387 OR2D3Q8NGH3 330 aa6.2□□□□□ -1.42
NUP50-205ENST00000419387 GTSF1Q8WW33 167 aa6.2□□□□□ -1.42
NUP50-205ENST00000419387 KRTAP4-2Q9BYR5 136 aa6.2□□□□□ -1.42
NUP50-205ENST00000419387 KIF25-AS1Q9Y6Z4 181 aa6.2□□□□□ -1.42
NUP50-205ENST00000419387 HERC1Q15751 4861 aa6.19□□□□□ -1.42
NUP50-205ENST00000419387 F5H697 171 aa6.19□□□□□ -1.42
NUP50-205ENST00000419387 P01737 135 aa6.19□□□□□ -1.42
NUP50-205ENST00000419387 SMIM17P0DL12 118 aa6.19□□□□□ -1.42
NUP50-205ENST00000419387 FOXA3P55318 350 aaPredicted RBP6.19□□□□□ -1.42
NUP50-205ENST00000419387 RAB14P61106 215 aa6.19□□□□□ -1.42
NUP50-205ENST00000419387 SSTP61278 116 aa6.19□□□□□ -1.42
NUP50-205ENST00000419387 FAM74A3Q4VXF1 159 aa6.19□□□□□ -1.42
NUP50-205ENST00000419387 ENHOQ6UWT2 76 aa6.19□□□□□ -1.42
NUP50-205ENST00000419387 ISOC2Q96AB3 205 aa6.19□□□□□ -1.42
NUP50-205ENST00000419387 LINC00862A6NCI5 91 aa6.18□□□□□ -1.42
NUP50-205ENST00000419387 PKIAP61925 76 aa6.18□□□□□ -1.42
NUP50-205ENST00000419387 LINC01620Q4KN68 170 aa6.18□□□□□ -1.42
NUP50-205ENST00000419387 TMEM97Q5BJF2 176 aa6.18□□□□□ -1.42
NUP50-205ENST00000419387 LYZL1Q6UWQ5 148 aa6.18□□□□□ -1.42
NUP50-205ENST00000419387 C15orf54Q8N8G6 183 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms