RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 TMEM219Q86XT9 240 aa13.09□□□□□ -0.31
PMS1-206ENST00000418224 TRAV8-3A0A0A6YYJ7 113 aa13.08□□□□□ -0.32
PMS1-206ENST00000418224 TMEM141Q96I45 108 aa13.08□□□□□ -0.32
PMS1-206ENST00000418224 LEPROTO15243 131 aa13.08□□□□□ -0.32
PMS1-206ENST00000418224 RPL11P62913 178 aaKnown RBP13.08□□□□□ -0.32
PMS1-206ENST00000418224 SIRPDQ9H106 197 aa13.08□□□□□ -0.32
PMS1-206ENST00000418224 C20orf173Q96LM9 149 aa13.07□□□□□ -0.32
PMS1-206ENST00000418224 TRAV21A0A0B4J279 112 aa13.07□□□□□ -0.32
PMS1-206ENST00000418224 COX6CP09669 75 aa13.07□□□□□ -0.32
PMS1-206ENST00000418224 DNAJC30Q96LL9 226 aa13.07□□□□□ -0.32
PMS1-206ENST00000418224 TMEM223A0PJW6 202 aa13.06□□□□□ -0.32
PMS1-206ENST00000418224 SDHAF1A6NFY7 115 aa13.06□□□□□ -0.32
PMS1-206ENST00000418224 PPP1R17O96001 155 aa13.06□□□□□ -0.32
PMS1-206ENST00000418224 HERVK_113P63121 156 aa13.06□□□□□ -0.32
PMS1-206ENST00000418224 C11orf71Q6IPW1 123 aa13.06□□□□□ -0.32
PMS1-206ENST00000418224 IGHV3OR16-10A0A075B7F0 116 aa13.06□□□□□ -0.32
PMS1-206ENST00000418224 TRBV7-1A0A0A6YYK4 115 aa13.06□□□□□ -0.32
PMS1-206ENST00000418224 A0A0J9YXY3 114 aa13.06□□□□□ -0.32
PMS1-206ENST00000418224 FBXL19-AS1Q494R0 122 aa13.06□□□□□ -0.32
PMS1-206ENST00000418224 MRPL53Q96EL3 112 aaKnown RBP13.06□□□□□ -0.32
PMS1-206ENST00000418224 A0A0J9YXV3 536 aa13.05□□□□□ -0.32
PMS1-206ENST00000418224 TRBV7-7A0A0K0K1E9 115 aa13.05□□□□□ -0.32
PMS1-206ENST00000418224 VCYO14598 125 aa13.05□□□□□ -0.32
PMS1-206ENST00000418224 NPFFO15130 113 aa13.05□□□□□ -0.32
PMS1-206ENST00000418224 NDUFA7O95182 113 aa13.05□□□□□ -0.32
PMS1-206ENST00000418224 TIMM17AQ99595 171 aa13.05□□□□□ -0.32
PMS1-206ENST00000418224 SPXQ9BT56 116 aa13.05□□□□□ -0.32
PMS1-206ENST00000418224 IGF2RP11717 2491 aa13.05□□□□□ -0.32
PMS1-206ENST00000418224 FAM74A4Q5TZK3 123 aa13.05□□□□□ -0.32
PMS1-206ENST00000418224 H3BT86 120 aa13.05□□□□□ -0.32
PMS1-206ENST00000418224 ZFAND2AQ8N6M9 145 aa13.05□□□□□ -0.32
PMS1-206ENST00000418224 POLR2KP53803 58 aaKnown RBP13.04□□□□□ -0.32
PMS1-206ENST00000418224 SUMO4Q6EEV6 95 aa13.04□□□□□ -0.32
PMS1-206ENST00000418224 K7ENP7 123 aa13.04□□□□□ -0.32
PMS1-206ENST00000418224 C3orf22Q8N5N4 141 aa13.04□□□□□ -0.32
PMS1-206ENST00000418224 SPTAN1Q13813 2472 aaKnown RBP13.03□□□□□ -0.32
PMS1-206ENST00000418224 F6UB75 175 aa13.03□□□□□ -0.32
PMS1-206ENST00000418224 RNASE3P12724 160 aaKnown RBP13.03□□□□□ -0.32
PMS1-206ENST00000418224 ADORA2A-AS1P86434 159 aa13.03□□□□□ -0.32
PMS1-206ENST00000418224 C9orf139Q6ZV77 190 aa13.03□□□□□ -0.32
PMS1-206ENST00000418224 C5orf47Q569G3 176 aa13.03□□□□□ -0.32
PMS1-206ENST00000418224 DUX5Q96PT3 197 aa13.03□□□□□ -0.32
PMS1-206ENST00000418224 UNQ9165/PRO28630Q6UXU0 137 aa13.02□□□□□ -0.32
PMS1-206ENST00000418224 POM121L12Q8N7R1 296 aa13.02□□□□□ -0.32
PMS1-206ENST00000418224 ADAMTSL4-AS1Q5T5F5 129 aa13.02□□□□□ -0.33
PMS1-206ENST00000418224 FAM240AA0A1B0GVK7 77 aa13.02□□□□□ -0.33
PMS1-206ENST00000418224 TRBV12-3P01733 135 aa13.02□□□□□ -0.33
PMS1-206ENST00000418224 LINC01600Q96MT4 127 aa13.02□□□□□ -0.33
PMS1-206ENST00000418224 U3KQE9 123 aa13.02□□□□□ -0.33
PMS1-206ENST00000418224 TRAV12-3A0A0B4J271 114 aa13.01□□□□□ -0.33
PMS1-206ENST00000418224 LINC00315P59091 139 aa13.01□□□□□ -0.33
PMS1-206ENST00000418224 FAM19A5Q7Z5A7 132 aaPredicted RBP13.01□□□□□ -0.33
PMS1-206ENST00000418224 TRAV41A0A0B4J266 112 aa13.01□□□□□ -0.33
PMS1-206ENST00000418224 I3L3M4 83 aa13.01□□□□□ -0.33
PMS1-206ENST00000418224 MUC4Q99102 2169 aa13.01□□□□□ -0.33
PMS1-206ENST00000418224 IGHV3-11P01762 117 aa13□□□□□ -0.33
PMS1-206ENST00000418224 LINC00477Q96M19 166 aa13□□□□□ -0.33
PMS1-206ENST00000418224 UBTD1Q9HAC8 227 aa13□□□□□ -0.33
PMS1-206ENST00000418224 SMIM9A6NGZ8 99 aa13□□□□□ -0.33
PMS1-206ENST00000418224 C5orf56Q8N8D9 126 aa13□□□□□ -0.33
PMS1-206ENST00000418224 A0A1W2PPR1 153 aa12.99□□□□□ -0.33
PMS1-206ENST00000418224 ITLN2Q8WWU7 325 aaPredicted RBP12.99□□□□□ -0.33
PMS1-206ENST00000418224 EDA2RQ9HAV5 297 aa12.99□□□□□ -0.33
PMS1-206ENST00000418224 IGHV3-30-3P0DP02 117 aa12.99□□□□□ -0.33
PMS1-206ENST00000418224 KIF25-AS1Q9Y6Z4 181 aa12.99□□□□□ -0.33
PMS1-206ENST00000418224 LST1O00453 97 aa12.99□□□□□ -0.33
PMS1-206ENST00000418224 SMCR5Q8TEV8 140 aa12.99□□□□□ -0.33
PMS1-206ENST00000418224 A8MZ25 164 aa12.98□□□□□ -0.33
PMS1-206ENST00000418224 BPESC1Q9GZL8 116 aa12.98□□□□□ -0.33
PMS1-206ENST00000418224 LENEPQ9Y5L5 61 aa12.98□□□□□ -0.33
PMS1-206ENST00000418224 IGHV4OR15-8A0A075B7B6 117 aa12.98□□□□□ -0.33
PMS1-206ENST00000418224 A0A087WW49 117 aa12.98□□□□□ -0.33
PMS1-206ENST00000418224 UQCRQO14949 82 aa12.98□□□□□ -0.33
PMS1-206ENST00000418224 DAND5Q8N907 189 aa12.97□□□□□ -0.33
PMS1-206ENST00000418224 OVOL1O14753 267 aa12.97□□□□□ -0.33
PMS1-206ENST00000418224 PRRC2AP48634 2157 aaKnown RBP12.97□□□□□ -0.33
PMS1-206ENST00000418224 TIMM21Q9BVV7 248 aa12.97□□□□□ -0.33
PMS1-206ENST00000418224 J3KT08 172 aa12.97□□□□□ -0.33
PMS1-206ENST00000418224 LITAFQ99732 161 aa12.97□□□□□ -0.33
PMS1-206ENST00000418224 RNASE13Q5GAN3 156 aaKnown RBP12.96□□□□□ -0.33
PMS1-206ENST00000418224 CELSR1Q9NYQ6 3014 aa12.96□□□□□ -0.33
PMS1-206ENST00000418224 DEFB121Q5J5C9 76 aa12.96□□□□□ -0.34
PMS1-206ENST00000418224 BRD3OSQ6XYD6 125 aa12.96□□□□□ -0.34
PMS1-206ENST00000418224 KLK9Q2XQG4 91 aa12.95□□□□□ -0.34
PMS1-206ENST00000418224 KLK9Q9UKQ9 250 aa12.95□□□□□ -0.34
PMS1-206ENST00000418224 LINC00526Q96FQ7 95 aa12.95□□□□□ -0.34
PMS1-206ENST00000418224 LY6EQ16553 131 aa12.94□□□□□ -0.34
PMS1-206ENST00000418224 GAGE2AQ6NT46 116 aa12.94□□□□□ -0.34
PMS1-206ENST00000418224 NDUFA12Q9UI09 145 aa12.94□□□□□ -0.34
PMS1-206ENST00000418224 MOB4Q9Y3A3 225 aa12.94□□□□□ -0.34
PMS1-206ENST00000418224 FAM223BA6NKX1 122 aa12.94□□□□□ -0.34
PMS1-206ENST00000418224 FAM223AQ8IWN6 122 aa12.94□□□□□ -0.34
PMS1-206ENST00000418224 TRBV27A0A0K0K1C4 114 aa12.94□□□□□ -0.34
PMS1-206ENST00000418224 LY6DQ14210 128 aa12.94□□□□□ -0.34
PMS1-206ENST00000418224 IMUPQ9GZP8 106 aa12.94□□□□□ -0.34
PMS1-206ENST00000418224 ZFHX3Q15911 3703 aa12.93□□□□□ -0.34
PMS1-206ENST00000418224 MAP1AP78559 2803 aaPredicted RBP12.93□□□□□ -0.34
PMS1-206ENST00000418224 LMO4P61968 165 aa12.93□□□□□ -0.34
PMS1-206ENST00000418224 HIVEP3Q5T1R4 2406 aa12.92□□□□□ -0.34
PMS1-206ENST00000418224 RS1O15537 224 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms