RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 MED9Q9NWA0 146 aa16.76■□□□□ 0.27
VEGFA-208ENST00000417285 TAGLN2P37802 199 aaKnown RBP16.75■□□□□ 0.27
VEGFA-208ENST00000417285 BIN3Q9NQY0 253 aa16.75■□□□□ 0.27
VEGFA-208ENST00000417285 VAX2Q9UIW0 290 aa16.75■□□□□ 0.27
VEGFA-208ENST00000417285 KLK12Q9UKR0 248 aa16.75■□□□□ 0.27
VEGFA-208ENST00000417285 XKRY2A2RUG3 117 aa16.74■□□□□ 0.27
VEGFA-208ENST00000417285 C19orf71A6NCJ1 209 aa16.74■□□□□ 0.27
VEGFA-208ENST00000417285 WFDC2Q14508 124 aa16.74■□□□□ 0.27
VEGFA-208ENST00000417285 AKAP14Q86UN6 197 aa16.74■□□□□ 0.27
VEGFA-208ENST00000417285 Q8N976 141 aa16.74■□□□□ 0.27
VEGFA-208ENST00000417285 FER1L6-AS1Q8NA97 138 aa16.74■□□□□ 0.27
VEGFA-208ENST00000417285 TPPP3Q9BW30 176 aa16.74■□□□□ 0.27
VEGFA-208ENST00000417285 TRBV6-8A0A0A6YYG3 113 aa16.73■□□□□ 0.27
VEGFA-208ENST00000417285 GZMBP10144 247 aa16.73■□□□□ 0.27
VEGFA-208ENST00000417285 BAALCQ8WXS3 180 aa16.73■□□□□ 0.27
VEGFA-208ENST00000417285 P01737 135 aa16.72■□□□□ 0.27
VEGFA-208ENST00000417285 IGLC6P0CF74 106 aa16.72■□□□□ 0.27
VEGFA-208ENST00000417285 Q0VG73 95 aa16.72■□□□□ 0.27
VEGFA-208ENST00000417285 FAM30AQ9NZY2 134 aa16.72■□□□□ 0.27
VEGFA-208ENST00000417285 KIF25-AS1Q9Y6Z4 181 aa16.72■□□□□ 0.27
VEGFA-208ENST00000417285 VPS13BQ7Z7G8 4022 aa16.72■□□□□ 0.27
VEGFA-208ENST00000417285 IGKV2D-24A0A075B6R9 120 aa16.71■□□□□ 0.27
VEGFA-208ENST00000417285 RBFOX3A6NFN3 312 aa16.71■□□□□ 0.27
VEGFA-208ENST00000417285 TMEM262E9PQX1 116 aa16.71■□□□□ 0.27
VEGFA-208ENST00000417285 LECT2O14960 151 aa16.71■□□□□ 0.27
VEGFA-208ENST00000417285 CACNG7P62955 275 aa16.71■□□□□ 0.27
VEGFA-208ENST00000417285 TMEM97Q5BJF2 176 aa16.7■□□□□ 0.26
VEGFA-208ENST00000417285 C9orf62Q8N4C0 152 aa16.7■□□□□ 0.26
VEGFA-208ENST00000417285 UBE2WQ96B02 151 aa16.7■□□□□ 0.26
VEGFA-208ENST00000417285 TRBV20OR9-2A0A075B6H5 130 aa16.69■□□□□ 0.26
VEGFA-208ENST00000417285 PKIAP61925 76 aa16.69■□□□□ 0.26
VEGFA-208ENST00000417285 HAMPP81172 84 aa16.69■□□□□ 0.26
VEGFA-208ENST00000417285 F2Z2F3 143 aa16.68■□□□□ 0.26
VEGFA-208ENST00000417285 ATRAIDQ6UW56 229 aa16.68■□□□□ 0.26
VEGFA-208ENST00000417285 HERC1Q15751 4861 aa16.67■□□□□ 0.26
VEGFA-208ENST00000417285 hCG_2014768A0A024R1R8 64 aa16.67■□□□□ 0.26
VEGFA-208ENST00000417285 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.67■□□□□ 0.26
VEGFA-208ENST00000417285 MGPP08493 103 aa16.67■□□□□ 0.26
VEGFA-208ENST00000417285 Q6ZSA8 131 aa16.67■□□□□ 0.26
VEGFA-208ENST00000417285 H7C1H1 209 aa16.66■□□□□ 0.26
VEGFA-208ENST00000417285 DNAJC30Q96LL9 226 aa16.66■□□□□ 0.26
VEGFA-208ENST00000417285 CHCHD5Q9BSY4 110 aa16.66■□□□□ 0.26
VEGFA-208ENST00000417285 TRGC1P0CF51 173 aa16.65■□□□□ 0.26
VEGFA-208ENST00000417285 FLG2Q5D862 2391 aaPredicted RBP16.65■□□□□ 0.26
VEGFA-208ENST00000417285 CRPP02741 224 aa16.64■□□□□ 0.25
VEGFA-208ENST00000417285 BLOC1S1P78537 153 aa16.64■□□□□ 0.25
VEGFA-208ENST00000417285 LYZL1Q6UWQ5 148 aa16.64■□□□□ 0.25
VEGFA-208ENST00000417285 M0QY20 66 aa16.63■□□□□ 0.25
VEGFA-208ENST00000417285 MPV17L2Q567V2 206 aa16.63■□□□□ 0.25
VEGFA-208ENST00000417285 C15orf54Q8N8G6 183 aa16.63■□□□□ 0.25
VEGFA-208ENST00000417285 NUDT10Q8NFP7 164 aa16.63■□□□□ 0.25
VEGFA-208ENST00000417285 NUDT11Q96G61 164 aa16.63■□□□□ 0.25
VEGFA-208ENST00000417285 C1orf43Q9BWL3 253 aa16.63■□□□□ 0.25
VEGFA-208ENST00000417285 ANGP03950 147 aaKnown RBP16.62■□□□□ 0.25
VEGFA-208ENST00000417285 C14orf177Q52M58 125 aa16.62■□□□□ 0.25
VEGFA-208ENST00000417285 SUMO4Q6EEV6 95 aa16.62■□□□□ 0.25
VEGFA-208ENST00000417285 ALKAL2Q6UX46 152 aa16.62■□□□□ 0.25
VEGFA-208ENST00000417285 TRBV25-1A0A075B6N4 114 aa16.61■□□□□ 0.25
VEGFA-208ENST00000417285 PLA2G1BP04054 148 aaKnown RBP16.61■□□□□ 0.25
VEGFA-208ENST00000417285 ENHOQ6UWT2 76 aa16.61■□□□□ 0.25
VEGFA-208ENST00000417285 NTM-AS1Q6ZSK4 140 aa16.61■□□□□ 0.25
VEGFA-208ENST00000417285 DNAH8Q96JB1 4490 aa16.6■□□□□ 0.25
VEGFA-208ENST00000417285 NTF3P20783 257 aa16.6■□□□□ 0.25
VEGFA-208ENST00000417285 CTRLP40313 264 aa16.6■□□□□ 0.25
VEGFA-208ENST00000417285 WDR73Q6P4I2 378 aa16.6■□□□□ 0.25
VEGFA-208ENST00000417285 DPH3P1Q9H4G8 78 aa16.6■□□□□ 0.25
VEGFA-208ENST00000417285 RPP21Q9H633 154 aaKnown RBP16.6■□□□□ 0.25
VEGFA-208ENST00000417285 OCC1Q8TAD7 63 aa16.59■□□□□ 0.25
VEGFA-208ENST00000417285 RNASE7Q9H1E1 156 aaKnown RBP16.59■□□□□ 0.25
VEGFA-208ENST00000417285 MYCBP2O75592 4640 aa16.59■□□□□ 0.25
VEGFA-208ENST00000417285 IGHV1-24A0A0C4DH33 117 aa16.58■□□□□ 0.24
VEGFA-208ENST00000417285 TMEM250H0YL14 139 aa16.58■□□□□ 0.24
VEGFA-208ENST00000417285 K7EN84 100 aa16.58■□□□□ 0.24
VEGFA-208ENST00000417285 RASL11AQ6T310 242 aa16.58■□□□□ 0.24
VEGFA-208ENST00000417285 GAGE6Q13070 117 aa16.57■□□□□ 0.24
VEGFA-208ENST00000417285 MIAQ16674 131 aa16.57■□□□□ 0.24
VEGFA-208ENST00000417285 IQCJQ1A5X6 159 aa16.57■□□□□ 0.24
VEGFA-208ENST00000417285 NKX2-5P52952 324 aaPredicted RBP16.56■□□□□ 0.24
VEGFA-208ENST00000417285 TWIST1Q15672 202 aa16.56■□□□□ 0.24
VEGFA-208ENST00000417285 LYPD6BQ8NI32 183 aa16.56■□□□□ 0.24
VEGFA-208ENST00000417285 CNFNQ9BYD5 112 aa16.56■□□□□ 0.24
VEGFA-208ENST00000417285 RBX1P62877 108 aa16.55■□□□□ 0.24
VEGFA-208ENST00000417285 LINC01620Q4KN68 170 aa16.55■□□□□ 0.24
VEGFA-208ENST00000417285 NIT2Q9NQR4 276 aa16.55■□□□□ 0.24
VEGFA-208ENST00000417285 LINC00528Q8N1L1 170 aa16.54■□□□□ 0.24
VEGFA-208ENST00000417285 CHAC1Q9BUX1 264 aa16.54■□□□□ 0.24
VEGFA-208ENST00000417285 PRR34Q9NV39 138 aa16.53■□□□□ 0.24
VEGFA-208ENST00000417285 GATCO43716 136 aaKnown RBP16.51■□□□□ 0.23
VEGFA-208ENST00000417285 CEBPGP53567 150 aa16.51■□□□□ 0.23
VEGFA-208ENST00000417285 SCXQ7RTU7 201 aa16.51■□□□□ 0.23
VEGFA-208ENST00000417285 LINC00269Q8N2A0 174 aa16.51■□□□□ 0.23
VEGFA-208ENST00000417285 PGLYRP4Q96LB8 373 aa16.51■□□□□ 0.23
VEGFA-208ENST00000417285 TMEM243Q9BU79 118 aa16.51■□□□□ 0.23
VEGFA-208ENST00000417285 HLA-DQA1P01909 254 aa16.5■□□□□ 0.23
VEGFA-208ENST00000417285 FAM231DQ6ZW35 169 aa16.5■□□□□ 0.23
VEGFA-208ENST00000417285 SMIM15Q7Z3B0 74 aa16.5■□□□□ 0.23
VEGFA-208ENST00000417285 CLPSL2Q6UWE3 100 aa16.49■□□□□ 0.23
VEGFA-208ENST00000417285 GTSF1Q8WW33 167 aa16.49■□□□□ 0.23
VEGFA-208ENST00000417285 EIF5A2Q9GZV4 153 aaKnown RBP16.49■□□□□ 0.23
VEGFA-208ENST00000417285 USP17L23D6RBM5 183 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms