RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 DNAJC30Q96LL9 226 aa9.51□□□□□ -0.89
MCF2L-210ENST00000409954 MANBALQ9NQG1 85 aa9.51□□□□□ -0.89
MCF2L-210ENST00000409954 VAX2Q9UIW0 290 aa9.51□□□□□ -0.89
MCF2L-210ENST00000409954 RPS20P60866 119 aaKnown RBP9.5□□□□□ -0.89
MCF2L-210ENST00000409954 LINC00528Q8N1L1 170 aa9.5□□□□□ -0.89
MCF2L-210ENST00000409954 DEFB104AQ8WTQ1 72 aa9.5□□□□□ -0.89
MCF2L-210ENST00000409954 CHCHD5Q9BSY4 110 aa9.5□□□□□ -0.89
MCF2L-210ENST00000409954 CHAC1Q9BUX1 264 aa9.5□□□□□ -0.89
MCF2L-210ENST00000409954 KIF25-AS1Q9Y6Z4 181 aa9.5□□□□□ -0.89
MCF2L-210ENST00000409954 VPS13BQ7Z7G8 4022 aa9.49□□□□□ -0.89
MCF2L-210ENST00000409954 J3QL48 77 aa9.49□□□□□ -0.89
MCF2L-210ENST00000409954 ANGP03950 147 aaKnown RBP9.49□□□□□ -0.89
MCF2L-210ENST00000409954 SSTP61278 116 aa9.49□□□□□ -0.89
MCF2L-210ENST00000409954 MIAQ16674 131 aa9.49□□□□□ -0.89
MCF2L-210ENST00000409954 C15orf54Q8N8G6 183 aa9.49□□□□□ -0.89
MCF2L-210ENST00000409954 C11orf52Q96A22 123 aa9.49□□□□□ -0.89
MCF2L-210ENST00000409954 SMIM12Q96EX1 92 aa9.49□□□□□ -0.89
MCF2L-210ENST00000409954 AP1S3Q96PC3 154 aa9.49□□□□□ -0.89
MCF2L-210ENST00000409954 GNG13Q9P2W3 67 aa9.49□□□□□ -0.89
MCF2L-210ENST00000409954 FLG2Q5D862 2391 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-210ENST00000409954 MUC21A0A0G2JKD1 596 aa9.48□□□□□ -0.89
MCF2L-210ENST00000409954 MUC21A0A140T8X8 626 aa9.48□□□□□ -0.89
MCF2L-210ENST00000409954 XKRY2A2RUG3 117 aa9.48□□□□□ -0.89
MCF2L-210ENST00000409954 F2Z2F3 143 aa9.48□□□□□ -0.89
MCF2L-210ENST00000409954 H7C1H1 209 aa9.48□□□□□ -0.89
MCF2L-210ENST00000409954 CCL20P78556 96 aa9.48□□□□□ -0.89
MCF2L-210ENST00000409954 LINC01620Q4KN68 170 aa9.48□□□□□ -0.89
MCF2L-210ENST00000409954 MPV17L2Q567V2 206 aa9.48□□□□□ -0.89
MCF2L-210ENST00000409954 DERL1Q9BUN8 251 aa9.48□□□□□ -0.89
MCF2L-210ENST00000409954 DNAH8Q96JB1 4490 aa9.47□□□□□ -0.89
MCF2L-210ENST00000409954 TRBV25-1A0A075B6N4 114 aa9.47□□□□□ -0.89
MCF2L-210ENST00000409954 CACNG7P62955 275 aa9.47□□□□□ -0.89
MCF2L-210ENST00000409954 DGAT2L7PQ6IED9 249 aa9.47□□□□□ -0.89
MCF2L-210ENST00000409954 NTM-AS1Q6ZSK4 140 aa9.47□□□□□ -0.89
MCF2L-210ENST00000409954 SCXQ7RTU7 201 aa9.47□□□□□ -0.89
MCF2L-210ENST00000409954 BIN3Q9NQY0 253 aa9.47□□□□□ -0.89
MCF2L-210ENST00000409954 KRTAP29-1A8MX34 341 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-210ENST00000409954 PDE6DO43924 150 aa9.46□□□□□ -0.9
MCF2L-210ENST00000409954 FER1L6-AS1Q8NA97 138 aa9.46□□□□□ -0.9
MCF2L-210ENST00000409954 OR2D3Q8NGH3 330 aa9.46□□□□□ -0.9
MCF2L-210ENST00000409954 PRR34Q9NV39 138 aa9.46□□□□□ -0.9
MCF2L-210ENST00000409954 C19orf71A6NCJ1 209 aa9.45□□□□□ -0.9
MCF2L-210ENST00000409954 M0QY20 66 aa9.45□□□□□ -0.9
MCF2L-210ENST00000409954 IGLC6P0CF74 106 aa9.45□□□□□ -0.9
MCF2L-210ENST00000409954 GNG4P50150 75 aa9.45□□□□□ -0.9
MCF2L-210ENST00000409954 RBX1P62877 108 aa9.45□□□□□ -0.9
MCF2L-210ENST00000409954 IQCJQ1A5X6 159 aa9.45□□□□□ -0.9
MCF2L-210ENST00000409954 CIRBP-AS1Q8TBR5 109 aa9.45□□□□□ -0.9
MCF2L-210ENST00000409954 HERC1Q15751 4861 aa9.45□□□□□ -0.9
MCF2L-210ENST00000409954 IGHV1-24A0A0C4DH33 117 aa9.44□□□□□ -0.9
MCF2L-210ENST00000409954 IGLV2-8P01709 118 aa9.44□□□□□ -0.9
MCF2L-210ENST00000409954 SULT1A2P50226 295 aa9.44□□□□□ -0.9
MCF2L-210ENST00000409954 CENPWQ5EE01 88 aa9.44□□□□□ -0.9
MCF2L-210ENST00000409954 WDR73Q6P4I2 378 aa9.44□□□□□ -0.9
MCF2L-210ENST00000409954 TPPP3Q9BW30 176 aa9.44□□□□□ -0.9
MCF2L-210ENST00000409954 RAB19A4D1S5 217 aa9.43□□□□□ -0.9
MCF2L-210ENST00000409954 USP17L23D6RBM5 183 aa9.43□□□□□ -0.9
MCF2L-210ENST00000409954 IFNA1P01562 189 aa9.43□□□□□ -0.9
MCF2L-210ENST00000409954 P01737 135 aa9.43□□□□□ -0.9
MCF2L-210ENST00000409954 TRGC1P0CF51 173 aa9.43□□□□□ -0.9
MCF2L-210ENST00000409954 MEF2BQ02080 365 aaPredicted RBP9.43□□□□□ -0.9
MCF2L-210ENST00000409954 GAGE6Q13070 117 aa9.43□□□□□ -0.9
MCF2L-210ENST00000409954 LINC00269Q8N2A0 174 aa9.43□□□□□ -0.9
MCF2L-210ENST00000409954 C9orf62Q8N4C0 152 aa9.43□□□□□ -0.9
MCF2L-210ENST00000409954 CLRN3Q8NCR9 226 aa9.43□□□□□ -0.9
MCF2L-210ENST00000409954 MED9Q9NWA0 146 aa9.43□□□□□ -0.9
MCF2L-210ENST00000409954 TRAV8-4A0A0B4J246 113 aa9.42□□□□□ -0.9
MCF2L-210ENST00000409954 A0A1B0GUV1 79 aa9.42□□□□□ -0.9
MCF2L-210ENST00000409954 MGPP08493 103 aa9.42□□□□□ -0.9
MCF2L-210ENST00000409954 GZMBP10144 247 aa9.42□□□□□ -0.9
MCF2L-210ENST00000409954 TAGLN2P37802 199 aaKnown RBP9.42□□□□□ -0.9
MCF2L-210ENST00000409954 RASL11AQ6T310 242 aa9.42□□□□□ -0.9
MCF2L-210ENST00000409954 C9orf163Q8N9P6 203 aa9.42□□□□□ -0.9
MCF2L-210ENST00000409954 NIT2Q9NQR4 276 aa9.42□□□□□ -0.9
MCF2L-210ENST00000409954 HLA-DQA1P01909 254 aa9.41□□□□□ -0.9
MCF2L-210ENST00000409954 PRSS1P07477 247 aa9.41□□□□□ -0.9
MCF2L-210ENST00000409954 NTF3P20783 257 aa9.41□□□□□ -0.9
MCF2L-210ENST00000409954 REG3AQ06141 175 aa9.4□□□□□ -0.9
MCF2L-210ENST00000409954 SUMO4Q6EEV6 95 aa9.4□□□□□ -0.9
MCF2L-210ENST00000409954 KRTAP26-1Q6PEX3 210 aa9.4□□□□□ -0.9
MCF2L-210ENST00000409954 LYZL1Q6UWQ5 148 aa9.4□□□□□ -0.9
MCF2L-210ENST00000409954 DPH3P1Q9H4G8 78 aa9.4□□□□□ -0.9
MCF2L-210ENST00000409954 MYCBP2O75592 4640 aa9.39□□□□□ -0.91
MCF2L-210ENST00000409954 OXTP01178 125 aa9.39□□□□□ -0.91
MCF2L-210ENST00000409954 NKX2-5P52952 324 aaPredicted RBP9.39□□□□□ -0.91
MCF2L-210ENST00000409954 SLC51BQ86UW2 128 aa9.39□□□□□ -0.91
MCF2L-210ENST00000409954 NUDT10Q8NFP7 164 aa9.39□□□□□ -0.91
MCF2L-210ENST00000409954 NUDT11Q96G61 164 aa9.39□□□□□ -0.91
MCF2L-210ENST00000409954 PGLYRP4Q96LB8 373 aa9.39□□□□□ -0.91
MCF2L-210ENST00000409954 TMEM243Q9BU79 118 aa9.39□□□□□ -0.91
MCF2L-210ENST00000409954 BCL2P10415 239 aa9.38□□□□□ -0.91
MCF2L-210ENST00000409954 TCTE3Q8IZS6 198 aa9.38□□□□□ -0.91
MCF2L-210ENST00000409954 TRBV20OR9-2A0A075B6H5 130 aa9.37□□□□□ -0.91
MCF2L-210ENST00000409954 KRTAP10-4P60372 401 aaPredicted RBP9.37□□□□□ -0.91
MCF2L-210ENST00000409954 COTL1Q14019 142 aa9.37□□□□□ -0.91
MCF2L-210ENST00000409954 TWIST1Q15672 202 aa9.37□□□□□ -0.91
MCF2L-210ENST00000409954 CLPSL2Q6UWE3 100 aa9.37□□□□□ -0.91
MCF2L-210ENST00000409954 SDIM1Q6ZPB5 146 aa9.37□□□□□ -0.91
MCF2L-210ENST00000409954 C20orf203Q8NBC4 194 aa9.37□□□□□ -0.91
MCF2L-210ENST00000409954 UBE2L6O14933 153 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms