RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 TRBV7-3A0A075B6L6 115 aa14.31□□□□□ -0.12
C4orf48-202ENST00000409860 LINC00694P0DN24 101 aa14.31□□□□□ -0.12
C4orf48-202ENST00000409860 ZNRF2Q8NHG8 242 aa14.31□□□□□ -0.12
C4orf48-202ENST00000409860 DNAJC30Q96LL9 226 aa14.31□□□□□ -0.12
C4orf48-202ENST00000409860 Q9UF83 564 aa14.31□□□□□ -0.12
C4orf48-202ENST00000409860 COX19Q49B96 90 aa14.3□□□□□ -0.12
C4orf48-202ENST00000409860 ATP6V0E2Q8NHE4 81 aa14.3□□□□□ -0.12
C4orf48-202ENST00000409860 TNFRSF18Q9Y5U5 241 aa14.3□□□□□ -0.12
C4orf48-202ENST00000409860 CCL18P55774 89 aa14.29□□□□□ -0.12
C4orf48-202ENST00000409860 ELOBQ15370 118 aa14.29□□□□□ -0.12
C4orf48-202ENST00000409860 MRPL51Q4U2R6 128 aaKnown RBP14.29□□□□□ -0.12
C4orf48-202ENST00000409860 NIT2Q9NQR4 276 aa14.29□□□□□ -0.12
C4orf48-202ENST00000409860 PLECQ15149 4684 aaKnown RBP14.28□□□□□ -0.12
C4orf48-202ENST00000409860 ATP6V1G1O75348 118 aa14.28□□□□□ -0.12
C4orf48-202ENST00000409860 CBLN2Q8IUK8 224 aa14.28□□□□□ -0.12
C4orf48-202ENST00000409860 UBE2DNLQ8IWF7 75 aa14.28□□□□□ -0.12
C4orf48-202ENST00000409860 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.28□□□□□ -0.12
C4orf48-202ENST00000409860 TRBV24-1A0A075B6N3 115 aa14.27□□□□□ -0.13
C4orf48-202ENST00000409860 TGIF2-C20orf24A0A0A6YYL0 155 aa14.27□□□□□ -0.13
C4orf48-202ENST00000409860 S100A1P23297 94 aa14.27□□□□□ -0.13
C4orf48-202ENST00000409860 UBE2D3P61077 147 aa14.27□□□□□ -0.13
C4orf48-202ENST00000409860 UBE2D2P62837 147 aa14.27□□□□□ -0.13
C4orf48-202ENST00000409860 OR10J3Q5JRS4 329 aa14.27□□□□□ -0.13
C4orf48-202ENST00000409860 TMEM136Q6ZRR5 245 aa14.27□□□□□ -0.13
C4orf48-202ENST00000409860 NCR2O95944 276 aa14.26□□□□□ -0.13
C4orf48-202ENST00000409860 PPP1R17O96001 155 aa14.26□□□□□ -0.13
C4orf48-202ENST00000409860 HLA-DQA1P01909 254 aa14.26□□□□□ -0.13
C4orf48-202ENST00000409860 CKS2P33552 79 aa14.26□□□□□ -0.13
C4orf48-202ENST00000409860 ESRGQ1W209 222 aa14.26□□□□□ -0.13
C4orf48-202ENST00000409860 LGALS9CQ6DKI2 356 aa14.26□□□□□ -0.13
C4orf48-202ENST00000409860 RPL39LQ96EH5 51 aaKnown RBP14.26□□□□□ -0.13
C4orf48-202ENST00000409860 SMKR1H3BMG3 65 aa14.25□□□□□ -0.13
C4orf48-202ENST00000409860 PPBPP02775 128 aa14.25□□□□□ -0.13
C4orf48-202ENST00000409860 TIRAPP58753 221 aa14.25□□□□□ -0.13
C4orf48-202ENST00000409860 LYPD5Q6UWN5 251 aa14.25□□□□□ -0.13
C4orf48-202ENST00000409860 GNB1LQ9BYB4 327 aa14.25□□□□□ -0.13
C4orf48-202ENST00000409860 GTSF1LQ9H1H1 148 aa14.25□□□□□ -0.13
C4orf48-202ENST00000409860 D6R8Y8 96 aa14.24□□□□□ -0.13
C4orf48-202ENST00000409860 MT-ND6P03923 174 aa14.24□□□□□ -0.13
C4orf48-202ENST00000409860 DAZ4Q86SG3 579 aaKnown RBP14.24□□□□□ -0.13
C4orf48-202ENST00000409860 DAZ3Q9NR90 486 aaKnown RBP14.24□□□□□ -0.13
C4orf48-202ENST00000409860 GAS8-AS1O95177 125 aa14.23□□□□□ -0.13
C4orf48-202ENST00000409860 RPS10P46783 165 aaKnown RBP14.23□□□□□ -0.13
C4orf48-202ENST00000409860 ORMDL3Q8N138 153 aa14.23□□□□□ -0.13
C4orf48-202ENST00000409860 LINC00476Q8WZB0 136 aa14.23□□□□□ -0.13
C4orf48-202ENST00000409860 YPEL4Q96NS1 127 aa14.23□□□□□ -0.13
C4orf48-202ENST00000409860 ST20Q9HBF5 79 aa14.23□□□□□ -0.13
C4orf48-202ENST00000409860 LINC00588Q9Y4M8 146 aa14.23□□□□□ -0.13
C4orf48-202ENST00000409860 TRBV6-5A0A0K0K1A5 114 aa14.22□□□□□ -0.13
C4orf48-202ENST00000409860 LY6G6CO95867 125 aa14.22□□□□□ -0.13
C4orf48-202ENST00000409860 APCSP02743 223 aa14.22□□□□□ -0.13
C4orf48-202ENST00000409860 MRPS16Q9Y3D3 137 aaKnown RBP14.22□□□□□ -0.13
C4orf48-202ENST00000409860 TENM2Q9NT68 2774 aa14.21□□□□□ -0.13
C4orf48-202ENST00000409860 IGHV3-38A0A0C4DH36 116 aa14.21□□□□□ -0.13
C4orf48-202ENST00000409860 NRACQ8N912 160 aa14.21□□□□□ -0.13
C4orf48-202ENST00000409860 SDHAF1A6NFY7 115 aa14.2□□□□□ -0.14
C4orf48-202ENST00000409860 TMEM97Q5BJF2 176 aa14.2□□□□□ -0.14
C4orf48-202ENST00000409860 PHOX2AO14813 284 aa14.19□□□□□ -0.14
C4orf48-202ENST00000409860 TNFRSF6BO95407 300 aa14.19□□□□□ -0.14
C4orf48-202ENST00000409860 LELP1Q5T871 98 aa14.19□□□□□ -0.14
C4orf48-202ENST00000409860 PRELID3AQ96N28 172 aa14.19□□□□□ -0.14
C4orf48-202ENST00000409860 UPK3BQ9BT76 320 aa14.19□□□□□ -0.14
C4orf48-202ENST00000409860 MRPL18Q9H0U6 180 aaKnown RBP14.19□□□□□ -0.14
C4orf48-202ENST00000409860 LAMTOR2Q9Y2Q5 125 aa14.19□□□□□ -0.14
C4orf48-202ENST00000409860 SCO1O75880 301 aa14.18□□□□□ -0.14
C4orf48-202ENST00000409860 SUMO2P61956 95 aaKnown RBP14.18□□□□□ -0.14
C4orf48-202ENST00000409860 C20orf78Q9BR46 151 aa14.18□□□□□ -0.14
C4orf48-202ENST00000409860 TRAPPC1Q9Y5R8 145 aa14.18□□□□□ -0.14
C4orf48-202ENST00000409860 ALMS1Q8TCU4 4167 aa14.18□□□□□ -0.14
C4orf48-202ENST00000409860 TRAV8-6A0A0B4J262 113 aa14.17□□□□□ -0.14
C4orf48-202ENST00000409860 LCE6AA0A183 80 aa14.17□□□□□ -0.14
C4orf48-202ENST00000409860 NPYP01303 97 aa14.17□□□□□ -0.14
C4orf48-202ENST00000409860 FABP9Q0Z7S8 132 aa14.17□□□□□ -0.14
C4orf48-202ENST00000409860 TMEM70Q9BUB7 260 aa14.17□□□□□ -0.14
C4orf48-202ENST00000409860 COTL1Q14019 142 aa14.16□□□□□ -0.14
C4orf48-202ENST00000409860 KIAA1644Q3SXP7 199 aa14.16□□□□□ -0.14
C4orf48-202ENST00000409860 TRBV6-8A0A0A6YYG3 113 aa14.15□□□□□ -0.14
C4orf48-202ENST00000409860 I3L3M4 83 aa14.15□□□□□ -0.14
C4orf48-202ENST00000409860 PMCHP20382 165 aa14.15□□□□□ -0.14
C4orf48-202ENST00000409860 POLR2KP53803 58 aaKnown RBP14.15□□□□□ -0.14
C4orf48-202ENST00000409860 TRBV27A0A0K0K1C4 114 aa14.14□□□□□ -0.15
C4orf48-202ENST00000409860 VCYO14598 125 aa14.14□□□□□ -0.15
C4orf48-202ENST00000409860 RPL32P62910 135 aaKnown RBP14.14□□□□□ -0.15
C4orf48-202ENST00000409860 TRBV25-1A0A075B6N4 114 aa14.13□□□□□ -0.15
C4orf48-202ENST00000409860 IGHV1-24A0A0C4DH33 117 aa14.13□□□□□ -0.15
C4orf48-202ENST00000409860 MAP1LC3AQ9H492 121 aa14.13□□□□□ -0.15
C4orf48-202ENST00000409860 SIVA1O15304 175 aa14.12□□□□□ -0.15
C4orf48-202ENST00000409860 NTM-AS1Q6ZSK4 140 aa14.12□□□□□ -0.15
C4orf48-202ENST00000409860 WFDC10BQ8IUB3 73 aa14.12□□□□□ -0.15
C4orf48-202ENST00000409860 KIR2DL4Q99706 377 aa14.12□□□□□ -0.15
C4orf48-202ENST00000409860 SMIM2Q9BVW6 85 aa14.12□□□□□ -0.15
C4orf48-202ENST00000409860 Q9H8V8 135 aa14.12□□□□□ -0.15
C4orf48-202ENST00000409860 COLCA2A8K830 154 aa14.11□□□□□ -0.15
C4orf48-202ENST00000409860 AMTP48728 403 aa14.11□□□□□ -0.15
C4orf48-202ENST00000409860 IQCJQ1A5X6 159 aa14.11□□□□□ -0.15
C4orf48-202ENST00000409860 DEFB104AQ8WTQ1 72 aa14.11□□□□□ -0.15
C4orf48-202ENST00000409860 DNAH1Q9P2D7 4330 aa14.1□□□□□ -0.15
C4orf48-202ENST00000409860 FCER1GP30273 86 aa14.1□□□□□ -0.15
C4orf48-202ENST00000409860 CHCHD5Q9BSY4 110 aa14.1□□□□□ -0.15
C4orf48-202ENST00000409860 ALKBH7Q9BT30 221 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms