RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 IGHV3-35A0A0C4DH35 117 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 IGHV3-66A0A0C4DH42 116 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 IGHV3-30-3P0DP02 117 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 LINC00315P59091 139 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 FRYQ5TBA9 3013 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 ZGRF1Q86YA3 2104 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 CREBBPQ92793 2442 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 RNASE3P12724 160 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 NDPQ00604 133 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 FAM27E3Q08E93 113 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 C15orf32Q32M92 178 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 DAND5Q8N907 189 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 ITLN2Q8WWU7 325 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 CELSR3Q9NYQ7 3312 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 INAFM2P0DMQ5 153 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 FDCSPQ8NFU4 85 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 MRAPQ8TCY5 172 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 RNASE6Q93091 150 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 F5H697 171 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 TIMM17BO60830 172 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 KLK9Q2XQG4 91 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 FAM110DQ8TAY7 271 aaPredicted RBP4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 EEF1AKMT3Q96AZ1 226 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 KLK9Q9UKQ9 250 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 NBEAQ8NFP9 2946 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 IGHV1-58A0A0C4DH39 117 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 TNRC18O15417 2968 aaPredicted RBP4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 SPRY2O43597 315 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 C22orf34Q6ZV56 151 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 APRG1Q8IVJ8 170 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 DPH3Q96FX2 82 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 FAM215AQ9Y5M1 114 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 MALRD1Q5VYJ5 2156 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 CCDC168Q8NDH2 2452 aa4.36□□□□□ -1.71
R3HDM1-202ENST00000409478 CADP27708 2225 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 COX7A2LO14548 114 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 RNASE4P34096 147 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 BSPH1Q075Z2 132 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 NDUFA12Q9UI09 145 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 U3KQE9 123 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 MED13Q9UHV7 2174 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 FREM2Q5SZK8 3169 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 A0A0J9YXV3 536 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 hADV29S1A0JD25 119 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 COPS9Q8WXC6 57 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 TRAV41A0A0B4J266 112 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 GNRH2O43555 120 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 RPL18AQ02543 176 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 ADAMTSL4-AS1Q5T5F5 129 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 C20orf203Q8NBC4 194 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 FAM19A4Q96LR4 140 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 WNK2Q9Y3S1 2297 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 IGHV3OR16-13A0A075B7E8 117 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 TRBV7-1A0A0A6YYK4 115 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 IGHV3-74A0A0B4J1X5 117 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 IGF1P05019 195 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 MRPS36P82909 103 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 FAM222AQ5U5X8 452 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 VMO1Q7Z5L0 202 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 DUX5Q96PT3 197 aa4.35□□□□□ -1.71
R3HDM1-202ENST00000409478 IGLV4-3A0A075B6K6 122 aa4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 IGHV7-81A0A0B4J1V7 117 aa4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 F5H768 121 aa4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 DAZ2Q13117 558 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 DAZ4Q86SG3 579 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 Q8N6K4 173 aa4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 OPRPNQ99935 248 aaPredicted RBP4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 DAZ1Q9NQZ3 744 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 DAZ3Q9NR90 486 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 ODF3BA8MYP8 253 aa4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 CLEC19AQ6UXS0 136 aa4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 SERP2Q8N6R1 65 aa4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 LY6G5BQ8NDX9 201 aa4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 C20orf173Q96LM9 149 aa4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 PYGO1Q9Y3Y4 419 aa4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 CSPG4Q6UVK1 2322 aa4.34□□□□□ -1.71
R3HDM1-202ENST00000409478 FRYLO94915 3013 aa4.34□□□□□ -1.72
R3HDM1-202ENST00000409478 ADARB2-AS1A8MUL3 147 aa4.34□□□□□ -1.72
R3HDM1-202ENST00000409478 ZNF580Q9UK33 172 aa4.34□□□□□ -1.72
R3HDM1-202ENST00000409478 ABCA1O95477 2261 aa4.34□□□□□ -1.72
R3HDM1-202ENST00000409478 A0A087WWL8 130 aa4.33□□□□□ -1.72
R3HDM1-202ENST00000409478 CIRBPQ14011 172 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-202ENST00000409478 VSIG2Q96IQ7 327 aa4.33□□□□□ -1.72
R3HDM1-202ENST00000409478 CCDC140Q96MF4 163 aa4.33□□□□□ -1.72
R3HDM1-202ENST00000409478 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.33□□□□□ -1.725e-11■■■■■ 97.2
R3HDM1-202ENST00000409478 IGHV3-49A0A0A0MS15 119 aa4.33□□□□□ -1.72
R3HDM1-202ENST00000409478 M0R1W7 72 aa4.33□□□□□ -1.72
R3HDM1-202ENST00000409478 Q6ZSV7 163 aa4.33□□□□□ -1.72
R3HDM1-202ENST00000409478 DEFB104AQ8WTQ1 72 aa4.33□□□□□ -1.72
R3HDM1-202ENST00000409478 BAALC-AS2P0C853 105 aa4.33□□□□□ -1.72
R3HDM1-202ENST00000409478 TINCRA0A1B0GVN0 87 aa4.32□□□□□ -1.72
R3HDM1-202ENST00000409478 M0QY20 66 aa4.32□□□□□ -1.72
R3HDM1-202ENST00000409478 CD28P10747 220 aa4.32□□□□□ -1.72
R3HDM1-202ENST00000409478 TIRAPP58753 221 aa4.32□□□□□ -1.72
R3HDM1-202ENST00000409478 NPC2P61916 151 aa4.32□□□□□ -1.72
R3HDM1-202ENST00000409478 ECSCRQ19T08 205 aa4.32□□□□□ -1.72
R3HDM1-202ENST00000409478 RPL11P62913 178 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-202ENST00000409478 KIR2DL5BQ8NHK3 375 aa4.32□□□□□ -1.72
R3HDM1-202ENST00000409478 MUC3AQ02505 3323 aa4.32□□□□□ -1.72
R3HDM1-202ENST00000409478 TRAV13-1A0A0B4J241 112 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms