RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 KIF25-AS1Q9Y6Z4 181 aa10.12□□□□□ -0.79
TPM1-207ENST00000403994 F5H697 171 aa10.11□□□□□ -0.79
TPM1-207ENST00000403994 IGLC6P0CF74 106 aa10.11□□□□□ -0.79
TPM1-207ENST00000403994 GZMBP10144 247 aa10.11□□□□□ -0.79
TPM1-207ENST00000403994 SSTP61278 116 aa10.11□□□□□ -0.79
TPM1-207ENST00000403994 ELOBQ15370 118 aa10.11□□□□□ -0.79
TPM1-207ENST00000403994 MPV17L2Q567V2 206 aa10.11□□□□□ -0.79
TPM1-207ENST00000403994 TRBV20OR9-2A0A075B6H5 130 aa10.1□□□□□ -0.79
TPM1-207ENST00000403994 C19orf71A6NCJ1 209 aa10.1□□□□□ -0.79
TPM1-207ENST00000403994 RBFOX3A6NFN3 312 aa10.1□□□□□ -0.79
TPM1-207ENST00000403994 TEX46H3BTG2 121 aa10.1□□□□□ -0.79
TPM1-207ENST00000403994 SMIM17P0DL12 118 aa10.1□□□□□ -0.79
TPM1-207ENST00000403994 GNG4P50150 75 aa10.1□□□□□ -0.79
TPM1-207ENST00000403994 FER1L6-AS1Q8NA97 138 aa10.1□□□□□ -0.79
TPM1-207ENST00000403994 SMIM12Q96EX1 92 aa10.1□□□□□ -0.79
TPM1-207ENST00000403994 TPPP3Q9BW30 176 aa10.1□□□□□ -0.79
TPM1-207ENST00000403994 VAX2Q9UIW0 290 aa10.1□□□□□ -0.79
TPM1-207ENST00000403994 RAB19A4D1S5 217 aa10.09□□□□□ -0.79
TPM1-207ENST00000403994 PDE6DO43924 150 aa10.09□□□□□ -0.79
TPM1-207ENST00000403994 IFNA1P01562 189 aa10.09□□□□□ -0.79
TPM1-207ENST00000403994 BCL2P10415 239 aa10.09□□□□□ -0.79
TPM1-207ENST00000403994 C15orf54Q8N8G6 183 aa10.09□□□□□ -0.79
TPM1-207ENST00000403994 OR2D3Q8NGH3 330 aa10.09□□□□□ -0.79
TPM1-207ENST00000403994 TMEM262E9PQX1 116 aa10.08□□□□□ -0.8
TPM1-207ENST00000403994 FAM229AH3BQW9 127 aa10.08□□□□□ -0.8
TPM1-207ENST00000403994 CRPP02741 224 aa10.08□□□□□ -0.8
TPM1-207ENST00000403994 RPS20P60866 119 aaKnown RBP10.08□□□□□ -0.8
TPM1-207ENST00000403994 Q0VG73 95 aa10.08□□□□□ -0.8
TPM1-207ENST00000403994 LINC01620Q4KN68 170 aa10.08□□□□□ -0.8
TPM1-207ENST00000403994 ENHOQ6UWT2 76 aa10.08□□□□□ -0.8
TPM1-207ENST00000403994 SLC51BQ86UW2 128 aa10.08□□□□□ -0.8
TPM1-207ENST00000403994 Q8N976 141 aa10.08□□□□□ -0.8
TPM1-207ENST00000403994 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.08□□□□□ -0.8
TPM1-207ENST00000403994 DAZAP1Q96EP5 407 aaKnown RBP10.08□□□□□ -0.8
TPM1-207ENST00000403994 CHCHD5Q9BSY4 110 aa10.08□□□□□ -0.8
TPM1-207ENST00000403994 C1orf43Q9BWL3 253 aa10.08□□□□□ -0.8
TPM1-207ENST00000403994 P01737 135 aa10.07□□□□□ -0.8
TPM1-207ENST00000403994 ANGP03950 147 aaKnown RBP10.07□□□□□ -0.8
TPM1-207ENST00000403994 MGPP08493 103 aa10.07□□□□□ -0.8
TPM1-207ENST00000403994 PKIAP61925 76 aa10.07□□□□□ -0.8
TPM1-207ENST00000403994 NTM-AS1Q6ZSK4 140 aa10.07□□□□□ -0.8
TPM1-207ENST00000403994 CACNG7P62955 275 aa10.06□□□□□ -0.8
TPM1-207ENST00000403994 TMEM97Q5BJF2 176 aa10.06□□□□□ -0.8
TPM1-207ENST00000403994 MED9Q9NWA0 146 aa10.06□□□□□ -0.8
TPM1-207ENST00000403994 XKRY2A2RUG3 117 aa10.05□□□□□ -0.8
TPM1-207ENST00000403994 M0QY20 66 aa10.05□□□□□ -0.8
TPM1-207ENST00000403994 SUMO4Q6EEV6 95 aa10.05□□□□□ -0.8
TPM1-207ENST00000403994 TRBV25-1A0A075B6N4 114 aa10.04□□□□□ -0.8
TPM1-207ENST00000403994 H7C1H1 209 aa10.04□□□□□ -0.8
TPM1-207ENST00000403994 HLA-DQA1P01909 254 aa10.04□□□□□ -0.8
TPM1-207ENST00000403994 CTRLP40313 264 aa10.04□□□□□ -0.8
TPM1-207ENST00000403994 LINC00528Q8N1L1 170 aa10.04□□□□□ -0.8
TPM1-207ENST00000403994 F2Z2F3 143 aa10.03□□□□□ -0.8
TPM1-207ENST00000403994 RBX1P62877 108 aa10.03□□□□□ -0.8
TPM1-207ENST00000403994 GAGE6Q13070 117 aa10.03□□□□□ -0.8
TPM1-207ENST00000403994 MIAQ16674 131 aa10.03□□□□□ -0.8
TPM1-207ENST00000403994 IQCJQ1A5X6 159 aa10.03□□□□□ -0.8
TPM1-207ENST00000403994 C14orf177Q52M58 125 aa10.03□□□□□ -0.8
TPM1-207ENST00000403994 CLPSL2Q6UWE3 100 aa10.03□□□□□ -0.8
TPM1-207ENST00000403994 LYZL1Q6UWQ5 148 aa10.03□□□□□ -0.8
TPM1-207ENST00000403994 SCXQ7RTU7 201 aa10.03□□□□□ -0.8
TPM1-207ENST00000403994 C9orf62Q8N4C0 152 aa10.03□□□□□ -0.8
TPM1-207ENST00000403994 BIN3Q9NQY0 253 aa10.03□□□□□ -0.8
TPM1-207ENST00000403994 PRR34Q9NV39 138 aa10.03□□□□□ -0.8
TPM1-207ENST00000403994 IGHV1-24A0A0C4DH33 117 aa10.02□□□□□ -0.81
TPM1-207ENST00000403994 TRGC1P0CF51 173 aa10.02□□□□□ -0.81
TPM1-207ENST00000403994 TAGLN2P37802 199 aaKnown RBP10.02□□□□□ -0.81
TPM1-207ENST00000403994 Q6ZNX1 250 aa10.02□□□□□ -0.81
TPM1-207ENST00000403994 USP17L23D6RBM5 183 aa10.01□□□□□ -0.81
TPM1-207ENST00000403994 K7EN84 100 aa10.01□□□□□ -0.81
TPM1-207ENST00000403994 NKX2-5P52952 324 aaPredicted RBP10.01□□□□□ -0.81
TPM1-207ENST00000403994 AKAP14Q86UN6 197 aa10.01□□□□□ -0.81
TPM1-207ENST00000403994 CNFNQ9BYD5 112 aa10.01□□□□□ -0.81
TPM1-207ENST00000403994 DPH3P1Q9H4G8 78 aa10.01□□□□□ -0.81
TPM1-207ENST00000403994 RPP21Q9H633 154 aaKnown RBP10.01□□□□□ -0.81
TPM1-207ENST00000403994 NTF3P20783 257 aa10□□□□□ -0.81
TPM1-207ENST00000403994 RASL11AQ6T310 242 aa10□□□□□ -0.81
TPM1-207ENST00000403994 LINC00269Q8N2A0 174 aa10□□□□□ -0.81
TPM1-207ENST00000403994 NUDT10Q8NFP7 164 aa10□□□□□ -0.81
TPM1-207ENST00000403994 NUDT11Q96G61 164 aa10□□□□□ -0.81
TPM1-207ENST00000403994 RNASE7Q9H1E1 156 aaKnown RBP10□□□□□ -0.81
TPM1-207ENST00000403994 PLA2G1BP04054 148 aaKnown RBP9.99□□□□□ -0.81
TPM1-207ENST00000403994 KRTAP26-1Q6PEX3 210 aa9.99□□□□□ -0.81
TPM1-207ENST00000403994 CHAC1Q9BUX1 264 aa9.99□□□□□ -0.81
TPM1-207ENST00000403994 hCG_2014768A0A024R1R8 64 aa9.98□□□□□ -0.81
TPM1-207ENST00000403994 WDR73Q6P4I2 378 aa9.98□□□□□ -0.81
TPM1-207ENST00000403994 ALKAL2Q6UX46 152 aa9.98□□□□□ -0.81
TPM1-207ENST00000403994 PGLYRP4Q96LB8 373 aa9.98□□□□□ -0.81
TPM1-207ENST00000403994 TMEM243Q9BU79 118 aa9.98□□□□□ -0.81
TPM1-207ENST00000403994 PKHD1L1Q86WI1 4243 aa9.98□□□□□ -0.81
TPM1-207ENST00000403994 PRSS1P07477 247 aa9.97□□□□□ -0.81
TPM1-207ENST00000403994 REG3AQ06141 175 aa9.97□□□□□ -0.81
TPM1-207ENST00000403994 C20orf203Q8NBC4 194 aa9.97□□□□□ -0.81
TPM1-207ENST00000403994 OCC1Q8TAD7 63 aa9.97□□□□□ -0.81
TPM1-207ENST00000403994 NIT2Q9NQR4 276 aa9.97□□□□□ -0.81
TPM1-207ENST00000403994 TRAV26-2A0A0B4J265 109 aa9.96□□□□□ -0.82
TPM1-207ENST00000403994 TMEM250H0YL14 139 aa9.96□□□□□ -0.82
TPM1-207ENST00000403994 TWIST1Q15672 202 aa9.96□□□□□ -0.82
TPM1-207ENST00000403994 CIRBP-AS1Q8TBR5 109 aa9.96□□□□□ -0.82
TPM1-207ENST00000403994 DEFB104AQ8WTQ1 72 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms