RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 FBN2P35556 2912 aa15.58■□□□□ 0.08
CTCF-202ENST00000401394 IGHV4-39P01824 125 aa15.58■□□□□ 0.08
CTCF-202ENST00000401394 SLC25A29Q8N8R3 303 aa15.57■□□□□ 0.08
CTCF-202ENST00000401394 SCGB1A1P11684 91 aa15.57■□□□□ 0.08
CTCF-202ENST00000401394 KLRB1Q12918 225 aa15.57■□□□□ 0.08
CTCF-202ENST00000401394 Q8N1Y9 231 aa15.57■□□□□ 0.08
CTCF-202ENST00000401394 C9JAW5 83 aa15.57■□□□□ 0.08
CTCF-202ENST00000401394 CRYBA4P53673 196 aa15.56■□□□□ 0.08
CTCF-202ENST00000401394 ZNF876PQ49A33 203 aa15.56■□□□□ 0.08
CTCF-202ENST00000401394 MUSTN1Q8IVN3 82 aa15.56■□□□□ 0.08
CTCF-202ENST00000401394 C10orf126Q8N4M7 172 aa15.56■□□□□ 0.08
CTCF-202ENST00000401394 NIPBLQ6KC79 2804 aaeCLIP15.56■□□□□ 0.08
CTCF-202ENST00000401394 IGHV1-69DA0A0B4J2H0 117 aa15.56■□□□□ 0.08
CTCF-202ENST00000401394 IGHV1-69P01742 117 aa15.56■□□□□ 0.08
CTCF-202ENST00000401394 KLLNB2CW77 178 aa15.55■□□□□ 0.08
CTCF-202ENST00000401394 VCYO14598 125 aa15.55■□□□□ 0.08
CTCF-202ENST00000401394 LGALS3P17931 250 aaKnown RBP15.55■□□□□ 0.08
CTCF-202ENST00000401394 TRAV8-3A0A0A6YYJ7 113 aa15.55■□□□□ 0.08
CTCF-202ENST00000401394 SPXQ9BT56 116 aa15.55■□□□□ 0.08
CTCF-202ENST00000401394 KNCNA6PVL3 124 aa15.54■□□□□ 0.08
CTCF-202ENST00000401394 HERVK_113P61574 105 aa15.54■□□□□ 0.08
CTCF-202ENST00000401394 TEN1Q86WV5 123 aa15.54■□□□□ 0.08
CTCF-202ENST00000401394 PRO1854Q9UHT4 67 aa15.54■□□□□ 0.08
CTCF-202ENST00000401394 IGHV4OR15-8A0A075B7B6 117 aa15.54■□□□□ 0.08
CTCF-202ENST00000401394 A0A087WW49 117 aa15.54■□□□□ 0.08
CTCF-202ENST00000401394 DCANP1Q8TF63 244 aa15.54■□□□□ 0.08
CTCF-202ENST00000401394 AVPP01185 164 aa15.54■□□□□ 0.08
CTCF-202ENST00000401394 RNF183Q96D59 192 aa15.53■□□□□ 0.08
CTCF-202ENST00000401394 M0QY20 66 aa15.53■□□□□ 0.08
CTCF-202ENST00000401394 DAZ1Q9NQZ3 744 aaKnown RBP15.53■□□□□ 0.08
CTCF-202ENST00000401394 PRRC2AP48634 2157 aaKnown RBP15.52■□□□□ 0.08
CTCF-202ENST00000401394 WNK1Q9H4A3 2382 aa15.52■□□□□ 0.08
CTCF-202ENST00000401394 A8MWV9 139 aa15.52■□□□□ 0.07
CTCF-202ENST00000401394 APRG1Q8IVJ8 170 aa15.51■□□□□ 0.07
CTCF-202ENST00000401394 PPDPFLQ8WWR9 84 aa15.51■□□□□ 0.07
CTCF-202ENST00000401394 MYO18BQ8IUG5 2567 aa15.51■□□□□ 0.07
CTCF-202ENST00000401394 NXPH4O95158 308 aa15.51■□□□□ 0.07
CTCF-202ENST00000401394 CACNA1AO00555 2505 aa15.51■□□□□ 0.07
CTCF-202ENST00000401394 IGHV3-16A0A0C4DH30 117 aa15.51■□□□□ 0.07
CTCF-202ENST00000401394 Q1RN00 199 aa15.51■□□□□ 0.07
CTCF-202ENST00000401394 POM121L12Q8N7R1 296 aa15.5■□□□□ 0.07
CTCF-202ENST00000401394 TRBV27A0A0K0K1C4 114 aa15.5■□□□□ 0.07
CTCF-202ENST00000401394 ZNF22P17026 224 aaPredicted RBP15.5■□□□□ 0.07
CTCF-202ENST00000401394 SLC25A20O43772 301 aa15.49■□□□□ 0.07
CTCF-202ENST00000401394 CRLF1O75462 422 aa15.49■□□□□ 0.07
CTCF-202ENST00000401394 PRSS2P07478 247 aa15.49■□□□□ 0.07
CTCF-202ENST00000401394 NRGNQ92686 78 aa15.49■□□□□ 0.07
CTCF-202ENST00000401394 IGHV3-33P01772 117 aa15.49■□□□□ 0.07
CTCF-202ENST00000401394 IGHG2P01859 326 aa15.49■□□□□ 0.07
CTCF-202ENST00000401394 TMEM223A0PJW6 202 aa15.48■□□□□ 0.07
CTCF-202ENST00000401394 DAND5Q8N907 189 aa15.48■□□□□ 0.07
CTCF-202ENST00000401394 TIMM17AQ99595 171 aa15.48■□□□□ 0.07
CTCF-202ENST00000401394 FAM208BQ5VWN6 2430 aa15.48■□□□□ 0.07
CTCF-202ENST00000401394 TEX49A0A1B0GTD5 131 aa15.48■□□□□ 0.07
CTCF-202ENST00000401394 ADAMTSL4-AS1Q5T5F5 129 aa15.48■□□□□ 0.07
CTCF-202ENST00000401394 TMEM263Q8WUH6 116 aaKnown RBP15.48■□□□□ 0.07
CTCF-202ENST00000401394 PKD1L2Q7Z442 2459 aa15.47■□□□□ 0.07
CTCF-202ENST00000401394 MAPK1IP1LQ8NDC0 245 aa15.47■□□□□ 0.07
CTCF-202ENST00000401394 NTN5Q8WTR8 489 aaPredicted RBP15.47■□□□□ 0.07
CTCF-202ENST00000401394 RBMY1A1P0DJD3 496 aaKnown RBP15.47■□□□□ 0.07
CTCF-202ENST00000401394 RBMY1CP0DJD4 496 aa15.47■□□□□ 0.07
CTCF-202ENST00000401394 MED14OSP0DP75 135 aa15.47■□□□□ 0.07
CTCF-202ENST00000401394 RBMY1FQ15415 496 aaKnown RBP15.47■□□□□ 0.07
CTCF-202ENST00000401394 TCTEX1D4Q5JR98 221 aa15.47■□□□□ 0.07
CTCF-202ENST00000401394 ATP6V0E2Q8NHE4 81 aa15.46■□□□□ 0.07
CTCF-202ENST00000401394 TMEM141Q96I45 108 aa15.46■□□□□ 0.07
CTCF-202ENST00000401394 ZFYVE26Q68DK2 2539 aa15.46■□□□□ 0.07
CTCF-202ENST00000401394 RHODO00212 210 aa15.46■□□□□ 0.07
CTCF-202ENST00000401394 FAM104AQ969W3 186 aa15.46■□□□□ 0.07
CTCF-202ENST00000401394 JMJD1CQ15652 2540 aa15.46■□□□□ 0.07
CTCF-202ENST00000401394 PTPN13Q12923 2485 aa15.46■□□□□ 0.06
CTCF-202ENST00000401394 IGLV4-3A0A075B6K6 122 aa15.45■□□□□ 0.06
CTCF-202ENST00000401394 LGALS9O00182 355 aa15.45■□□□□ 0.06
CTCF-202ENST00000401394 PPP1R17O96001 155 aa15.45■□□□□ 0.06
CTCF-202ENST00000401394 SONP18583 2426 aaKnown RBP15.45■□□□□ 0.06
CTCF-202ENST00000401394 ACACBO00763 2458 aa15.45■□□□□ 0.06
CTCF-202ENST00000401394 IGHV4-30-2A0A087WSY4 118 aa15.45■□□□□ 0.06
CTCF-202ENST00000401394 NF1P21359 2839 aa15.45■□□□□ 0.06
CTCF-202ENST00000401394 SYNJ2BPP57105 145 aa15.45■□□□□ 0.06
CTCF-202ENST00000401394 ABCA12Q86UK0 2595 aa15.44■□□□□ 0.06
CTCF-202ENST00000401394 EPG5Q9HCE0 2579 aa15.44■□□□□ 0.06
CTCF-202ENST00000401394 ERG28Q9UKR5 140 aa15.44■□□□□ 0.06
CTCF-202ENST00000401394 CHD6Q8TD26 2715 aa15.44■□□□□ 0.06
CTCF-202ENST00000401394 TRBV20-1A0A075B6N2 111 aa15.44■□□□□ 0.06
CTCF-202ENST00000401394 IGHV3-38A0A0C4DH36 116 aa15.44■□□□□ 0.06
CTCF-202ENST00000401394 C9orf85Q96MD7 179 aa15.44■□□□□ 0.06
CTCF-202ENST00000401394 A6NDX4 124 aa15.43■□□□□ 0.06
CTCF-202ENST00000401394 C20orf203Q8NBC4 194 aa15.43■□□□□ 0.06
CTCF-202ENST00000401394 USMG5Q96IX5 58 aa15.43■□□□□ 0.06
CTCF-202ENST00000401394 Q6ZSN1 163 aa15.43■□□□□ 0.06
CTCF-202ENST00000401394 DUX3Q96PT4 197 aa15.43■□□□□ 0.06
CTCF-202ENST00000401394 VCX2Q9H322 139 aa15.43■□□□□ 0.06
CTCF-202ENST00000401394 TRAV4A0A0B4J268 109 aa15.42■□□□□ 0.06
CTCF-202ENST00000401394 A0A0J9YXY3 114 aa15.42■□□□□ 0.06
CTCF-202ENST00000401394 PAPPA-AS1Q5QFB9 102 aa15.42■□□□□ 0.06
CTCF-202ENST00000401394 IGHV4-59P01825 116 aa15.42■□□□□ 0.06
CTCF-202ENST00000401394 IGHV3-30-3P0DP02 117 aa15.42■□□□□ 0.06
CTCF-202ENST00000401394 A0A0U1RRA0 63 aa15.42■□□□□ 0.06
CTCF-202ENST00000401394 TRIAP1O43715 76 aa15.42■□□□□ 0.06
CTCF-202ENST00000401394 IGLV1-40P01703 118 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms