RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 NTM-AS1Q6ZSK4 140 aa12.03□□□□□ -0.48
FXN-203ENST00000396366 OR2D3Q8NGH3 330 aa12.03□□□□□ -0.48
FXN-203ENST00000396366 RMI2Q96E14 147 aa12.03□□□□□ -0.48
FXN-203ENST00000396366 COX11Q9Y6N1 276 aa12.03□□□□□ -0.48
FXN-203ENST00000396366 TRBV20OR9-2A0A075B6H5 130 aa12.02□□□□□ -0.49
FXN-203ENST00000396366 GNG4P50150 75 aa12.02□□□□□ -0.49
FXN-203ENST00000396366 MPV17L2Q567V2 206 aa12.02□□□□□ -0.49
FXN-203ENST00000396366 KCNIP4Q6PIL6 250 aa12.02□□□□□ -0.49
FXN-203ENST00000396366 ENHOQ6UWT2 76 aa12.02□□□□□ -0.49
FXN-203ENST00000396366 DAZAP1Q96EP5 407 aaKnown RBP12.02□□□□□ -0.49
FXN-203ENST00000396366 CHCHD7Q9BUK0 85 aa12.02□□□□□ -0.49
FXN-203ENST00000396366 MED9Q9NWA0 146 aa12.02□□□□□ -0.49
FXN-203ENST00000396366 MYCBP2O75592 4640 aa12.01□□□□□ -0.49
FXN-203ENST00000396366 TEX46H3BTG2 121 aa12.01□□□□□ -0.49
FXN-203ENST00000396366 SMIM17P0DL12 118 aa12.01□□□□□ -0.49
FXN-203ENST00000396366 ELOBQ15370 118 aa12.01□□□□□ -0.49
FXN-203ENST00000396366 C15orf54Q8N8G6 183 aa12.01□□□□□ -0.49
FXN-203ENST00000396366 FER1L6-AS1Q8NA97 138 aa12.01□□□□□ -0.49
FXN-203ENST00000396366 FAM229AH3BQW9 127 aa12□□□□□ -0.49
FXN-203ENST00000396366 ATRAIDQ6UW56 229 aa12□□□□□ -0.49
FXN-203ENST00000396366 Q8N976 141 aa12□□□□□ -0.49
FXN-203ENST00000396366 AP1S3Q96PC3 154 aa12□□□□□ -0.49
FXN-203ENST00000396366 CHCHD5Q9BSY4 110 aa12□□□□□ -0.49
FXN-203ENST00000396366 PDE6DO43924 150 aa11.99□□□□□ -0.49
FXN-203ENST00000396366 C1QBP02746 253 aa11.99□□□□□ -0.49
FXN-203ENST00000396366 MGPP08493 103 aa11.99□□□□□ -0.49
FXN-203ENST00000396366 BCL2P10415 239 aa11.99□□□□□ -0.49
FXN-203ENST00000396366 SLC51BQ86UW2 128 aa11.99□□□□□ -0.49
FXN-203ENST00000396366 VAX2Q9UIW0 290 aa11.99□□□□□ -0.49
FXN-203ENST00000396366 FLG2Q5D862 2391 aaPredicted RBP11.99□□□□□ -0.49
FXN-203ENST00000396366 M0QY20 66 aa11.98□□□□□ -0.49
FXN-203ENST00000396366 IFNA1P01562 189 aa11.98□□□□□ -0.49
FXN-203ENST00000396366 ANGP03950 147 aaKnown RBP11.98□□□□□ -0.49
FXN-203ENST00000396366 RPS20P60866 119 aaKnown RBP11.98□□□□□ -0.49
FXN-203ENST00000396366 Q6ZNX1 250 aa11.98□□□□□ -0.49
FXN-203ENST00000396366 Q6ZSA8 131 aa11.98□□□□□ -0.49
FXN-203ENST00000396366 P01737 135 aa11.97□□□□□ -0.49
FXN-203ENST00000396366 Q0VG73 95 aa11.97□□□□□ -0.49
FXN-203ENST00000396366 GAGE6Q13070 117 aa11.97□□□□□ -0.49
FXN-203ENST00000396366 SUMO4Q6EEV6 95 aa11.97□□□□□ -0.49
FXN-203ENST00000396366 LYZL1Q6UWQ5 148 aa11.97□□□□□ -0.49
FXN-203ENST00000396366 CACNG7P62955 275 aa11.96□□□□□ -0.49
FXN-203ENST00000396366 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.96□□□□□ -0.49
FXN-203ENST00000396366 NUDT10Q8NFP7 164 aa11.96□□□□□ -0.49
FXN-203ENST00000396366 DEFB104AQ8WTQ1 72 aa11.96□□□□□ -0.49
FXN-203ENST00000396366 SMIM12Q96EX1 92 aa11.96□□□□□ -0.49
FXN-203ENST00000396366 NUDT11Q96G61 164 aa11.96□□□□□ -0.49
FXN-203ENST00000396366 C1orf43Q9BWL3 253 aa11.96□□□□□ -0.49
FXN-203ENST00000396366 CRPP02741 224 aa11.95□□□□□ -0.5
FXN-203ENST00000396366 RBX1P62877 108 aa11.95□□□□□ -0.5
FXN-203ENST00000396366 CLPSL2Q6UWE3 100 aa11.95□□□□□ -0.5
FXN-203ENST00000396366 C9orf62Q8N4C0 152 aa11.95□□□□□ -0.5
FXN-203ENST00000396366 DMBT1Q9UGM3 2413 aaPredicted RBP11.95□□□□□ -0.5
FXN-203ENST00000396366 hCG_2014768A0A024R1R8 64 aa11.94□□□□□ -0.5
FXN-203ENST00000396366 NTF3P20783 257 aa11.94□□□□□ -0.5
FXN-203ENST00000396366 NKX2-5P52952 324 aaPredicted RBP11.94□□□□□ -0.5
FXN-203ENST00000396366 OCC1Q8TAD7 63 aa11.94□□□□□ -0.5
FXN-203ENST00000396366 TRBV25-1A0A075B6N4 114 aa11.93□□□□□ -0.5
FXN-203ENST00000396366 F2Z2F3 143 aa11.93□□□□□ -0.5
FXN-203ENST00000396366 K7EN84 100 aa11.93□□□□□ -0.5
FXN-203ENST00000396366 TMEM97Q5BJF2 176 aa11.93□□□□□ -0.5
FXN-203ENST00000396366 LINC00269Q8N2A0 174 aa11.93□□□□□ -0.5
FXN-203ENST00000396366 RNASE7Q9H1E1 156 aaKnown RBP11.93□□□□□ -0.5
FXN-203ENST00000396366 XKRY2A2RUG3 117 aa11.92□□□□□ -0.5
FXN-203ENST00000396366 HLA-DQA1P01909 254 aa11.92□□□□□ -0.5
FXN-203ENST00000396366 SCXQ7RTU7 201 aa11.92□□□□□ -0.5
FXN-203ENST00000396366 LINC00528Q8N1L1 170 aa11.92□□□□□ -0.5
FXN-203ENST00000396366 IGHV1-24A0A0C4DH33 117 aa11.91□□□□□ -0.5
FXN-203ENST00000396366 USP17L23D6RBM5 183 aa11.91□□□□□ -0.5
FXN-203ENST00000396366 H7C1H1 209 aa11.91□□□□□ -0.5
FXN-203ENST00000396366 IQCJQ1A5X6 159 aa11.91□□□□□ -0.5
FXN-203ENST00000396366 KRTAP26-1Q6PEX3 210 aa11.91□□□□□ -0.5
FXN-203ENST00000396366 RASL11AQ6T310 242 aa11.91□□□□□ -0.5
FXN-203ENST00000396366 ALKAL2Q6UX46 152 aa11.91□□□□□ -0.5
FXN-203ENST00000396366 AKAP14Q86UN6 197 aa11.91□□□□□ -0.5
FXN-203ENST00000396366 BIN3Q9NQY0 253 aa11.91□□□□□ -0.5
FXN-203ENST00000396366 PRR34Q9NV39 138 aa11.91□□□□□ -0.5
FXN-203ENST00000396366 CTRLP40313 264 aa11.9□□□□□ -0.5
FXN-203ENST00000396366 PKIAP61925 76 aa11.9□□□□□ -0.5
FXN-203ENST00000396366 MIAQ16674 131 aa11.9□□□□□ -0.5
FXN-203ENST00000396366 DPH3P1Q9H4G8 78 aa11.9□□□□□ -0.5
FXN-203ENST00000396366 RPP21Q9H633 154 aaKnown RBP11.9□□□□□ -0.5
FXN-203ENST00000396366 PRSS1P07477 247 aa11.89□□□□□ -0.51
FXN-203ENST00000396366 TRGC1P0CF51 173 aa11.89□□□□□ -0.51
FXN-203ENST00000396366 TWIST1Q15672 202 aa11.89□□□□□ -0.51
FXN-203ENST00000396366 NIT2Q9NQR4 276 aa11.89□□□□□ -0.51
FXN-203ENST00000396366 TAGLN2P37802 199 aaKnown RBP11.88□□□□□ -0.51
FXN-203ENST00000396366 FOXA3P55318 350 aaPredicted RBP11.88□□□□□ -0.51
FXN-203ENST00000396366 WDR73Q6P4I2 378 aa11.88□□□□□ -0.51
FXN-203ENST00000396366 C20orf203Q8NBC4 194 aa11.88□□□□□ -0.51
FXN-203ENST00000396366 GTSF1Q8WW33 167 aa11.88□□□□□ -0.51
FXN-203ENST00000396366 CHAC1Q9BUX1 264 aa11.88□□□□□ -0.51
FXN-203ENST00000396366 IGLV4-60A0A075B6I1 120 aa11.87□□□□□ -0.51
FXN-203ENST00000396366 IGLV10-54A0A075B6I4 117 aa11.87□□□□□ -0.51
FXN-203ENST00000396366 TRAV26-2A0A0B4J265 109 aa11.87□□□□□ -0.51
FXN-203ENST00000396366 C14orf177Q52M58 125 aa11.87□□□□□ -0.51
FXN-203ENST00000396366 CIRBP-AS1Q8TBR5 109 aa11.87□□□□□ -0.51
FXN-203ENST00000396366 GFRA4Q9GZZ7 299 aa11.87□□□□□ -0.51
FXN-203ENST00000396366 PLA2G1BP04054 148 aaKnown RBP11.86□□□□□ -0.51
FXN-203ENST00000396366 REG3AQ06141 175 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms