RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 CDPF1Q6NVV7 123 aa11.73□□□□□ -0.53
UPK3A-202ENST00000396082 NIT1Q86X76 327 aa11.73□□□□□ -0.53
UPK3A-202ENST00000396082 TM2D2Q9BX73 214 aa11.73□□□□□ -0.53
UPK3A-202ENST00000396082 H7C1H1 209 aa11.72□□□□□ -0.53
UPK3A-202ENST00000396082 CDK2AP2O75956 126 aa11.72□□□□□ -0.53
UPK3A-202ENST00000396082 TRBV6-8A0A0A6YYG3 113 aa11.71□□□□□ -0.53
UPK3A-202ENST00000396082 TMEM262E9PQX1 116 aa11.71□□□□□ -0.53
UPK3A-202ENST00000396082 NTF3P20783 257 aa11.71□□□□□ -0.53
UPK3A-202ENST00000396082 CTRLP40313 264 aa11.71□□□□□ -0.53
UPK3A-202ENST00000396082 FAM210AQ96ND0 272 aa11.71□□□□□ -0.53
UPK3A-202ENST00000396082 SMIM7Q9BQ49 75 aa11.71□□□□□ -0.53
UPK3A-202ENST00000396082 GATCO43716 136 aaKnown RBP11.7□□□□□ -0.54
UPK3A-202ENST00000396082 ELOBQ15370 118 aa11.7□□□□□ -0.54
UPK3A-202ENST00000396082 TWIST1Q15672 202 aa11.7□□□□□ -0.54
UPK3A-202ENST00000396082 SUMO4Q6EEV6 95 aa11.7□□□□□ -0.54
UPK3A-202ENST00000396082 CHCHD7Q9BUK0 85 aa11.7□□□□□ -0.54
UPK3A-202ENST00000396082 DPH3P1Q9H4G8 78 aa11.7□□□□□ -0.54
UPK3A-202ENST00000396082 KLK12Q9UKR0 248 aa11.7□□□□□ -0.54
UPK3A-202ENST00000396082 TMEM97Q5BJF2 176 aa11.69□□□□□ -0.54
UPK3A-202ENST00000396082 RMI2Q96E14 147 aa11.69□□□□□ -0.54
UPK3A-202ENST00000396082 DNAJC30Q96LL9 226 aa11.69□□□□□ -0.54
UPK3A-202ENST00000396082 CHCHD5Q9BSY4 110 aa11.69□□□□□ -0.54
UPK3A-202ENST00000396082 ZNF727A8MUV8 499 aa11.68□□□□□ -0.54
UPK3A-202ENST00000396082 M0QY20 66 aa11.68□□□□□ -0.54
UPK3A-202ENST00000396082 WDR73Q6P4I2 378 aa11.68□□□□□ -0.54
UPK3A-202ENST00000396082 UBE2WQ96B02 151 aa11.68□□□□□ -0.54
UPK3A-202ENST00000396082 LRCOL1A6NCL2 159 aa11.67□□□□□ -0.54
UPK3A-202ENST00000396082 NDUFS6O75380 124 aaKnown RBP11.67□□□□□ -0.54
UPK3A-202ENST00000396082 PKIAP61925 76 aa11.67□□□□□ -0.54
UPK3A-202ENST00000396082 FAM231DQ6ZW35 169 aa11.67□□□□□ -0.54
UPK3A-202ENST00000396082 SMIM15Q7Z3B0 74 aa11.67□□□□□ -0.54
UPK3A-202ENST00000396082 COX11Q9Y6N1 276 aa11.67□□□□□ -0.54
UPK3A-202ENST00000396082 IGKV2D-24A0A075B6R9 120 aa11.66□□□□□ -0.54
UPK3A-202ENST00000396082 A8MWL6 223 aa11.66□□□□□ -0.54
UPK3A-202ENST00000396082 SRP19P09132 144 aaKnown RBP11.66□□□□□ -0.54
UPK3A-202ENST00000396082 RASL11AQ6T310 242 aa11.66□□□□□ -0.54
UPK3A-202ENST00000396082 MAPKAPK5-AS1Q8N8E1 139 aa11.66□□□□□ -0.54
UPK3A-202ENST00000396082 GTSF1Q8WW33 167 aa11.66□□□□□ -0.54
UPK3A-202ENST00000396082 CNFNQ9BYD5 112 aa11.66□□□□□ -0.54
UPK3A-202ENST00000396082 LRP1BQ9NZR2 4599 aa11.65□□□□□ -0.54
UPK3A-202ENST00000396082 TRBV25-1A0A075B6N4 114 aa11.65□□□□□ -0.54
UPK3A-202ENST00000396082 IGLV5-52A0A0A0MRZ9 124 aa11.65□□□□□ -0.54
UPK3A-202ENST00000396082 CRPP02741 224 aa11.65□□□□□ -0.54
UPK3A-202ENST00000396082 Q8N814 137 aa11.65□□□□□ -0.54
UPK3A-202ENST00000396082 NTN5Q8WTR8 489 aaPredicted RBP11.65□□□□□ -0.54
UPK3A-202ENST00000396082 BORCS7Q96B45 105 aa11.65□□□□□ -0.54
UPK3A-202ENST00000396082 MPV17L2Q567V2 206 aa11.64□□□□□ -0.55
UPK3A-202ENST00000396082 CT83Q5H943 113 aa11.64□□□□□ -0.55
UPK3A-202ENST00000396082 TEX261Q6UWH6 196 aa11.64□□□□□ -0.55
UPK3A-202ENST00000396082 LINC01551Q86U37 167 aa11.64□□□□□ -0.55
UPK3A-202ENST00000396082 C15orf54Q8N8G6 183 aa11.64□□□□□ -0.55
UPK3A-202ENST00000396082 PGLYRP4Q96LB8 373 aa11.64□□□□□ -0.55
UPK3A-202ENST00000396082 NIT2Q9NQR4 276 aa11.64□□□□□ -0.55
UPK3A-202ENST00000396082 IGHV1-24A0A0C4DH33 117 aa11.63□□□□□ -0.55
UPK3A-202ENST00000396082 ANGP03950 147 aaKnown RBP11.63□□□□□ -0.55
UPK3A-202ENST00000396082 GCSHP23434 173 aa11.63□□□□□ -0.55
UPK3A-202ENST00000396082 Q0VG73 95 aa11.63□□□□□ -0.55
UPK3A-202ENST00000396082 NTM-AS1Q6ZSK4 140 aa11.63□□□□□ -0.55
UPK3A-202ENST00000396082 RYR1P21817 5038 aa11.62□□□□□ -0.55
UPK3A-202ENST00000396082 LECT2O14960 151 aa11.62□□□□□ -0.55
UPK3A-202ENST00000396082 GAGE6Q13070 117 aa11.62□□□□□ -0.55
UPK3A-202ENST00000396082 C1orf43Q9BWL3 253 aa11.62□□□□□ -0.55
UPK3A-202ENST00000396082 KRTAP10-1P60331 282 aa11.61□□□□□ -0.55
UPK3A-202ENST00000396082 ATRAIDQ6UW56 229 aa11.61□□□□□ -0.55
UPK3A-202ENST00000396082 Q8N976 141 aa11.61□□□□□ -0.55
UPK3A-202ENST00000396082 BAALCQ8WXS3 180 aa11.61□□□□□ -0.55
UPK3A-202ENST00000396082 DNAH5Q8TE73 4624 aa11.6□□□□□ -0.55
UPK3A-202ENST00000396082 TRAV26-2A0A0B4J265 109 aa11.6□□□□□ -0.55
UPK3A-202ENST00000396082 WFDC2Q14508 124 aa11.6□□□□□ -0.55
UPK3A-202ENST00000396082 PEA15Q15121 130 aa11.6□□□□□ -0.55
UPK3A-202ENST00000396082 IQCJQ1A5X6 159 aa11.6□□□□□ -0.55
UPK3A-202ENST00000396082 TMEM241Q24JQ0 296 aa11.6□□□□□ -0.55
UPK3A-202ENST00000396082 FAM74A3Q4VXF1 159 aa11.6□□□□□ -0.55
UPK3A-202ENST00000396082 TSKUQ8WUA8 353 aa11.6□□□□□ -0.55
UPK3A-202ENST00000396082 OSTCQ9NRP0 149 aa11.6□□□□□ -0.55
UPK3A-202ENST00000396082 HIGD1CA8MV81 97 aa11.59□□□□□ -0.55
UPK3A-202ENST00000396082 TMEM243Q9BU79 118 aa11.59□□□□□ -0.55
UPK3A-202ENST00000396082 HSPG2P98160 4391 aa11.59□□□□□ -0.55
UPK3A-202ENST00000396082 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.58□□□□□ -0.56
UPK3A-202ENST00000396082 FOXA3P55318 350 aaPredicted RBP11.58□□□□□ -0.56
UPK3A-202ENST00000396082 RBX1P62877 108 aa11.58□□□□□ -0.56
UPK3A-202ENST00000396082 COTL1Q14019 142 aa11.58□□□□□ -0.56
UPK3A-202ENST00000396082 ADIRFQ15847 76 aa11.58□□□□□ -0.56
UPK3A-202ENST00000396082 CLPSL2Q6UWE3 100 aa11.58□□□□□ -0.56
UPK3A-202ENST00000396082 GATD1Q8NB37 220 aa11.58□□□□□ -0.56
UPK3A-202ENST00000396082 DEFB104AQ8WTQ1 72 aa11.58□□□□□ -0.56
UPK3A-202ENST00000396082 FRZBQ92765 325 aa11.58□□□□□ -0.56
UPK3A-202ENST00000396082 GFRA4Q9GZZ7 299 aa11.58□□□□□ -0.56
UPK3A-202ENST00000396082 A0A1B0GUT8 65 aa11.57□□□□□ -0.56
UPK3A-202ENST00000396082 UBE2L6O14933 153 aa11.57□□□□□ -0.56
UPK3A-202ENST00000396082 ENHOQ6UWT2 76 aa11.57□□□□□ -0.56
UPK3A-202ENST00000396082 ISOC2Q96AB3 205 aa11.57□□□□□ -0.56
UPK3A-202ENST00000396082 NAT8Q9UHE5 227 aa11.57□□□□□ -0.56
UPK3A-202ENST00000396082 FAM231BA6NCW3 169 aa11.56□□□□□ -0.56
UPK3A-202ENST00000396082 AMTP48728 403 aa11.56□□□□□ -0.56
UPK3A-202ENST00000396082 RPL23P62829 140 aaKnown RBP11.56□□□□□ -0.56
UPK3A-202ENST00000396082 MIAQ16674 131 aa11.56□□□□□ -0.56
UPK3A-202ENST00000396082 Q8N1X5 172 aa11.56□□□□□ -0.56
UPK3A-202ENST00000396082 RPL39LQ96EH5 51 aaKnown RBP11.56□□□□□ -0.56
UPK3A-202ENST00000396082 SMDT1Q9H4I9 107 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms