RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 AP1S3Q96PC3 154 aa9.18□□□□□ -0.94
CXCL12-205ENST00000395794 VAX2Q9UIW0 290 aa9.18□□□□□ -0.94
CXCL12-205ENST00000395794 RAB19A4D1S5 217 aa9.17□□□□□ -0.94
CXCL12-205ENST00000395794 TMEM262E9PQX1 116 aa9.17□□□□□ -0.94
CXCL12-205ENST00000395794 P01737 135 aa9.17□□□□□ -0.94
CXCL12-205ENST00000395794 BCL2P10415 239 aa9.17□□□□□ -0.94
CXCL12-205ENST00000395794 KRTAP10-1P60331 282 aa9.17□□□□□ -0.94
CXCL12-205ENST00000395794 Q6ZNX1 250 aa9.17□□□□□ -0.94
CXCL12-205ENST00000395794 CHCHD7Q9BUK0 85 aa9.17□□□□□ -0.94
CXCL12-205ENST00000395794 KRTAP4-8Q9BYQ9 185 aa9.17□□□□□ -0.94
CXCL12-205ENST00000395794 CACNG7P62955 275 aa9.16□□□□□ -0.94
CXCL12-205ENST00000395794 FER1L6-AS1Q8NA97 138 aa9.16□□□□□ -0.94
CXCL12-205ENST00000395794 KLK12Q9UKR0 248 aa9.16□□□□□ -0.94
CXCL12-205ENST00000395794 APOBP04114 4563 aaKnown RBP9.16□□□□□ -0.94
CXCL12-205ENST00000395794 TRBV6-8A0A0A6YYG3 113 aa9.15□□□□□ -0.94
CXCL12-205ENST00000395794 RBFOX3A6NFN3 312 aa9.15□□□□□ -0.94
CXCL12-205ENST00000395794 EPM2AB3EWF7 344 aa9.15□□□□□ -0.94
CXCL12-205ENST00000395794 F2Z2F3 143 aa9.15□□□□□ -0.94
CXCL12-205ENST00000395794 GZMBP10144 247 aa9.15□□□□□ -0.94
CXCL12-205ENST00000395794 PKIAP61925 76 aa9.15□□□□□ -0.94
CXCL12-205ENST00000395794 TMEM97Q5BJF2 176 aa9.15□□□□□ -0.94
CXCL12-205ENST00000395794 NEXN-AS1Q8NBZ9 246 aa9.15□□□□□ -0.94
CXCL12-205ENST00000395794 hCG_2014768A0A024R1R8 64 aa9.14□□□□□ -0.95
CXCL12-205ENST00000395794 IGKV2D-24A0A075B6R9 120 aa9.14□□□□□ -0.95
CXCL12-205ENST00000395794 C19orf71A6NCJ1 209 aa9.14□□□□□ -0.95
CXCL12-205ENST00000395794 H7C1H1 209 aa9.14□□□□□ -0.95
CXCL12-205ENST00000395794 IGLV2-8P01709 118 aa9.14□□□□□ -0.95
CXCL12-205ENST00000395794 MGPP08493 103 aa9.14□□□□□ -0.95
CXCL12-205ENST00000395794 UBE2WQ96B02 151 aa9.14□□□□□ -0.95
CXCL12-205ENST00000395794 CHCHD5Q9BSY4 110 aa9.14□□□□□ -0.95
CXCL12-205ENST00000395794 IGLC6P0CF74 106 aa9.13□□□□□ -0.95
CXCL12-205ENST00000395794 XGP55808 180 aa9.13□□□□□ -0.95
CXCL12-205ENST00000395794 Q0VG73 95 aa9.13□□□□□ -0.95
CXCL12-205ENST00000395794 C9orf62Q8N4C0 152 aa9.13□□□□□ -0.95
CXCL12-205ENST00000395794 FRZBQ92765 325 aa9.13□□□□□ -0.95
CXCL12-205ENST00000395794 TMEM70Q9BUB7 260 aa9.13□□□□□ -0.95
CXCL12-205ENST00000395794 LECT2O14960 151 aa9.12□□□□□ -0.95
CXCL12-205ENST00000395794 CRPP02741 224 aa9.12□□□□□ -0.95
CXCL12-205ENST00000395794 TRGC1P0CF51 173 aa9.12□□□□□ -0.95
CXCL12-205ENST00000395794 BLOC1S1P78537 153 aa9.12□□□□□ -0.95
CXCL12-205ENST00000395794 BAALCQ8WXS3 180 aa9.12□□□□□ -0.95
CXCL12-205ENST00000395794 DNAJC30Q96LL9 226 aa9.12□□□□□ -0.95
CXCL12-205ENST00000395794 KIF25-AS1Q9Y6Z4 181 aa9.12□□□□□ -0.95
CXCL12-205ENST00000395794 TRBV20OR9-2A0A075B6H5 130 aa9.11□□□□□ -0.95
CXCL12-205ENST00000395794 C15orf54Q8N8G6 183 aa9.11□□□□□ -0.95
CXCL12-205ENST00000395794 Q8N976 141 aa9.11□□□□□ -0.95
CXCL12-205ENST00000395794 TRBV25-1A0A075B6N4 114 aa9.1□□□□□ -0.95
CXCL12-205ENST00000395794 ANGP03950 147 aaKnown RBP9.1□□□□□ -0.95
CXCL12-205ENST00000395794 LYZL1Q6UWQ5 148 aa9.1□□□□□ -0.95
CXCL12-205ENST00000395794 ALKAL2Q6UX46 152 aa9.1□□□□□ -0.95
CXCL12-205ENST00000395794 NUDT10Q8NFP7 164 aa9.1□□□□□ -0.95
CXCL12-205ENST00000395794 NUDT11Q96G61 164 aa9.1□□□□□ -0.95
CXCL12-205ENST00000395794 C1orf43Q9BWL3 253 aa9.1□□□□□ -0.95
CXCL12-205ENST00000395794 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.09□□□□□ -0.95
CXCL12-205ENST00000395794 FAM229AH3BQW9 127 aa9.09□□□□□ -0.95
CXCL12-205ENST00000395794 M0QY20 66 aa9.09□□□□□ -0.95
CXCL12-205ENST00000395794 WFDC2Q14508 124 aa9.09□□□□□ -0.95
CXCL12-205ENST00000395794 TWIST1Q15672 202 aa9.09□□□□□ -0.95
CXCL12-205ENST00000395794 SUMO4Q6EEV6 95 aa9.09□□□□□ -0.95
CXCL12-205ENST00000395794 WDR73Q6P4I2 378 aa9.09□□□□□ -0.95
CXCL12-205ENST00000395794 DPH3P1Q9H4G8 78 aa9.09□□□□□ -0.95
CXCL12-205ENST00000395794 RPP21Q9H633 154 aaKnown RBP9.09□□□□□ -0.95
CXCL12-205ENST00000395794 IGHV1-24A0A0C4DH33 117 aa9.08□□□□□ -0.96
CXCL12-205ENST00000395794 TMEM250H0YL14 139 aa9.08□□□□□ -0.96
CXCL12-205ENST00000395794 NTF3P20783 257 aa9.08□□□□□ -0.96
CXCL12-205ENST00000395794 MPV17L2Q567V2 206 aa9.08□□□□□ -0.96
CXCL12-205ENST00000395794 RASL11AQ6T310 242 aa9.08□□□□□ -0.96
CXCL12-205ENST00000395794 SMIM15Q7Z3B0 74 aa9.08□□□□□ -0.96
CXCL12-205ENST00000395794 OCC1Q8TAD7 63 aa9.08□□□□□ -0.96
CXCL12-205ENST00000395794 RNASE7Q9H1E1 156 aaKnown RBP9.08□□□□□ -0.96
CXCL12-205ENST00000395794 SMR3BP02814 79 aaPredicted RBP9.07□□□□□ -0.96
CXCL12-205ENST00000395794 CTRLP40313 264 aa9.07□□□□□ -0.96
CXCL12-205ENST00000395794 NKX2-5P52952 324 aaPredicted RBP9.07□□□□□ -0.96
CXCL12-205ENST00000395794 CEBPGP53567 150 aa9.07□□□□□ -0.96
CXCL12-205ENST00000395794 GAGE6Q13070 117 aa9.07□□□□□ -0.96
CXCL12-205ENST00000395794 C14orf177Q52M58 125 aa9.07□□□□□ -0.96
CXCL12-205ENST00000395794 Q5VSD8 79 aa9.07□□□□□ -0.96
CXCL12-205ENST00000395794 ATRAIDQ6UW56 229 aa9.07□□□□□ -0.96
CXCL12-205ENST00000395794 NTM-AS1Q6ZSK4 140 aa9.07□□□□□ -0.96
CXCL12-205ENST00000395794 MIAQ16674 131 aa9.06□□□□□ -0.96
CXCL12-205ENST00000395794 IQCJQ1A5X6 159 aa9.06□□□□□ -0.96
CXCL12-205ENST00000395794 ENHOQ6UWT2 76 aa9.06□□□□□ -0.96
CXCL12-205ENST00000395794 EIF5A2Q9GZV4 153 aaKnown RBP9.06□□□□□ -0.96
CXCL12-205ENST00000395794 NIT2Q9NQR4 276 aa9.06□□□□□ -0.96
CXCL12-205ENST00000395794 K7EN84 100 aa9.05□□□□□ -0.96
CXCL12-205ENST00000395794 INAFM2P0DMQ5 153 aa9.05□□□□□ -0.96
CXCL12-205ENST00000395794 RBX1P62877 108 aa9.05□□□□□ -0.96
CXCL12-205ENST00000395794 HAMPP81172 84 aa9.05□□□□□ -0.96
CXCL12-205ENST00000395794 GATCO43716 136 aaKnown RBP9.04□□□□□ -0.96
CXCL12-205ENST00000395794 LINC00269Q8N2A0 174 aa9.04□□□□□ -0.96
CXCL12-205ENST00000395794 LYPD6BQ8NI32 183 aa9.04□□□□□ -0.96
CXCL12-205ENST00000395794 TMEM243Q9BU79 118 aa9.04□□□□□ -0.96
CXCL12-205ENST00000395794 CNFNQ9BYD5 112 aa9.04□□□□□ -0.96
CXCL12-205ENST00000395794 A8MWL6 223 aa9.03□□□□□ -0.96
CXCL12-205ENST00000395794 UBE2L6O14933 153 aa9.03□□□□□ -0.96
CXCL12-205ENST00000395794 HLA-DQA1P01909 254 aa9.03□□□□□ -0.96
CXCL12-205ENST00000395794 BORCS7Q96B45 105 aa9.03□□□□□ -0.96
CXCL12-205ENST00000395794 FAM30AQ9NZY2 134 aa9.03□□□□□ -0.96
CXCL12-205ENST00000395794 COTL1Q14019 142 aa9.02□□□□□ -0.97
CXCL12-205ENST00000395794 CLPSL2Q6UWE3 100 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms