RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ZNRF2Q8NHG8 242 aa11.79□□□□□ -0.52
SMARCD1-202ENST00000394963 VCX2Q9H322 139 aa11.79□□□□□ -0.52
SMARCD1-202ENST00000394963 CR1P17927 2039 aa11.79□□□□□ -0.52
SMARCD1-202ENST00000394963 AMMECR1LQ6DCA0 310 aa11.79□□□□□ -0.52
SMARCD1-202ENST00000394963 MRAP2Q96G30 205 aa11.79□□□□□ -0.52
SMARCD1-202ENST00000394963 TRGV4A0A0C4DH28 118 aa11.79□□□□□ -0.52
SMARCD1-202ENST00000394963 H3BUT2 72 aa11.79□□□□□ -0.52
SMARCD1-202ENST00000394963 K7EP13 123 aa11.79□□□□□ -0.52
SMARCD1-202ENST00000394963 APOMO95445 188 aa11.79□□□□□ -0.52
SMARCD1-202ENST00000394963 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.78□□□□□ -0.52
SMARCD1-202ENST00000394963 IGKV2-29A2NJV5 120 aaPredicted RBP11.78□□□□□ -0.52
SMARCD1-202ENST00000394963 DEFB125Q8N687 156 aa11.78□□□□□ -0.52
SMARCD1-202ENST00000394963 SPXQ9BT56 116 aa11.78□□□□□ -0.52
SMARCD1-202ENST00000394963 AZU1P20160 251 aa11.78□□□□□ -0.52
SMARCD1-202ENST00000394963 TMEM262E9PQX1 116 aa11.77□□□□□ -0.53
SMARCD1-202ENST00000394963 A0A096LNJ9 63 aa11.77□□□□□ -0.53
SMARCD1-202ENST00000394963 LINC00482Q8N8I6 264 aa11.77□□□□□ -0.53
SMARCD1-202ENST00000394963 NPSP0C0P6 89 aa11.76□□□□□ -0.53
SMARCD1-202ENST00000394963 LINC01545Q5VT33 79 aa11.76□□□□□ -0.53
SMARCD1-202ENST00000394963 C2orf88Q9BSF0 95 aa11.76□□□□□ -0.53
SMARCD1-202ENST00000394963 ZNF815PA8K554 130 aa11.76□□□□□ -0.53
SMARCD1-202ENST00000394963 H7C1H1 209 aa11.76□□□□□ -0.53
SMARCD1-202ENST00000394963 ZNF625Q96I27 306 aaPredicted RBP11.76□□□□□ -0.53
SMARCD1-202ENST00000394963 TRAV13-1A0A0B4J241 112 aa11.75□□□□□ -0.53
SMARCD1-202ENST00000394963 Q1RN00 199 aa11.75□□□□□ -0.53
SMARCD1-202ENST00000394963 SPAG8Q99932 426 aaPredicted RBP11.75□□□□□ -0.53
SMARCD1-202ENST00000394963 IGKV2D-26A0A0A0MRZ7 120 aa11.75□□□□□ -0.53
SMARCD1-202ENST00000394963 PPP1R17O96001 155 aa11.75□□□□□ -0.53
SMARCD1-202ENST00000394963 HERVK_113P61574 105 aa11.75□□□□□ -0.53
SMARCD1-202ENST00000394963 K7ERJ3 54 aa11.74□□□□□ -0.53
SMARCD1-202ENST00000394963 GEMIN7Q9H840 131 aaKnown RBP11.74□□□□□ -0.53
SMARCD1-202ENST00000394963 NSD1Q96L73 2696 aaPredicted RBP11.74□□□□□ -0.53
SMARCD1-202ENST00000394963 LOC107984156A0A0G2JMH3 177 aa11.74□□□□□ -0.53
SMARCD1-202ENST00000394963 ARL17AQ8IVW1 177 aa11.74□□□□□ -0.53
SMARCD1-202ENST00000394963 NRACQ8N912 160 aa11.74□□□□□ -0.53
SMARCD1-202ENST00000394963 Q9UF83 564 aa11.74□□□□□ -0.53
SMARCD1-202ENST00000394963 HLA-DRB4P13762 266 aa11.74□□□□□ -0.53
SMARCD1-202ENST00000394963 LGALS9BQ3B8N2 356 aa11.74□□□□□ -0.53
SMARCD1-202ENST00000394963 LGALS9CQ6DKI2 356 aa11.74□□□□□ -0.53
SMARCD1-202ENST00000394963 MTURNQ8N3F0 131 aa11.74□□□□□ -0.53
SMARCD1-202ENST00000394963 TOMM7Q9P0U1 55 aa11.74□□□□□ -0.53
SMARCD1-202ENST00000394963 HLA-DRB4X5D2U9 266 aa11.74□□□□□ -0.53
SMARCD1-202ENST00000394963 KLLNB2CW77 178 aa11.73□□□□□ -0.53
SMARCD1-202ENST00000394963 COTL1Q14019 142 aa11.73□□□□□ -0.53
SMARCD1-202ENST00000394963 LBHQ53QV2 105 aaPredicted RBP11.73□□□□□ -0.53
SMARCD1-202ENST00000394963 UBE2L6O14933 153 aa11.73□□□□□ -0.53
SMARCD1-202ENST00000394963 LGALS3P17931 250 aaKnown RBP11.73□□□□□ -0.53
SMARCD1-202ENST00000394963 A6NDN8 102 aa11.73□□□□□ -0.53
SMARCD1-202ENST00000394963 ZFP2Q6ZN57 461 aa11.73□□□□□ -0.53
SMARCD1-202ENST00000394963 Q6ZTI0 123 aa11.73□□□□□ -0.53
SMARCD1-202ENST00000394963 KRTAP1-3Q8IUG1 177 aa11.73□□□□□ -0.53
SMARCD1-202ENST00000394963 ODF1Q14990 250 aa11.72□□□□□ -0.53
SMARCD1-202ENST00000394963 COX8AP10176 69 aa11.72□□□□□ -0.53
SMARCD1-202ENST00000394963 ODF3L2Q3SX64 289 aa11.72□□□□□ -0.53
SMARCD1-202ENST00000394963 LGALS9O00182 355 aa11.72□□□□□ -0.53
SMARCD1-202ENST00000394963 RBMY1A1P0DJD3 496 aaKnown RBP11.72□□□□□ -0.53
SMARCD1-202ENST00000394963 RBMY1CP0DJD4 496 aa11.72□□□□□ -0.53
SMARCD1-202ENST00000394963 SCGB1C2P0DMR2 95 aa11.72□□□□□ -0.53
SMARCD1-202ENST00000394963 RBMY1FQ15415 496 aaKnown RBP11.72□□□□□ -0.53
SMARCD1-202ENST00000394963 TRPT1Q86TN4 253 aaKnown RBP11.72□□□□□ -0.53
SMARCD1-202ENST00000394963 TMEM89A2RUT3 159 aa11.71□□□□□ -0.53
SMARCD1-202ENST00000394963 ZNF469Q96JG9 3925 aaPredicted RBP11.71□□□□□ -0.53
SMARCD1-202ENST00000394963 GAGE10A6NGK3 116 aa11.71□□□□□ -0.53
SMARCD1-202ENST00000394963 M0R2P5 195 aa11.71□□□□□ -0.54
SMARCD1-202ENST00000394963 RPL24P83731 157 aaKnown RBP11.71□□□□□ -0.54
SMARCD1-202ENST00000394963 C11orf68Q9H3H3 251 aaKnown RBP11.71□□□□□ -0.54
SMARCD1-202ENST00000394963 PRADC1Q9BSG0 188 aa11.7□□□□□ -0.54
SMARCD1-202ENST00000394963 RBMY1BA6NDE4 496 aaKnown RBP11.7□□□□□ -0.54
SMARCD1-202ENST00000394963 RBMY1EA6NEQ0 496 aaKnown RBP11.7□□□□□ -0.54
SMARCD1-202ENST00000394963 RBMY1DP0C7P1 496 aaKnown RBP11.7□□□□□ -0.54
SMARCD1-202ENST00000394963 CHAC1Q9BUX1 264 aa11.7□□□□□ -0.54
SMARCD1-202ENST00000394963 CHCHD5Q9BSY4 110 aa11.7□□□□□ -0.54
SMARCD1-202ENST00000394963 SCRT2Q9NQ03 307 aa11.7□□□□□ -0.54
SMARCD1-202ENST00000394963 CBY1Q9Y3M2 126 aa11.7□□□□□ -0.54
SMARCD1-202ENST00000394963 F8VRH5 84 aa11.69□□□□□ -0.54
SMARCD1-202ENST00000394963 ORAOV1Q8WV07 137 aa11.69□□□□□ -0.54
SMARCD1-202ENST00000394963 TRAV2A0A0B4J234 112 aa11.69□□□□□ -0.54
SMARCD1-202ENST00000394963 A0A0J9YXV3 536 aa11.69□□□□□ -0.54
SMARCD1-202ENST00000394963 A0A0J9YY99 117 aa11.69□□□□□ -0.54
SMARCD1-202ENST00000394963 CLPSL2Q6UWE3 100 aa11.68□□□□□ -0.54
SMARCD1-202ENST00000394963 ZNF479Q96JC4 524 aa11.68□□□□□ -0.54
SMARCD1-202ENST00000394963 U3KQK5 164 aa11.68□□□□□ -0.54
SMARCD1-202ENST00000394963 I3L3M4 83 aa11.68□□□□□ -0.54
SMARCD1-202ENST00000394963 DEFB135Q30KP9 77 aa11.68□□□□□ -0.54
SMARCD1-202ENST00000394963 BVES-AS1Q5T3Y7 98 aa11.68□□□□□ -0.54
SMARCD1-202ENST00000394963 C20orf78Q9BR46 151 aa11.68□□□□□ -0.54
SMARCD1-202ENST00000394963 MRPS16Q9Y3D3 137 aaKnown RBP11.68□□□□□ -0.54
SMARCD1-202ENST00000394963 A0A087WX48 190 aa11.67□□□□□ -0.54
SMARCD1-202ENST00000394963 BAALCQ8WXS3 180 aa11.67□□□□□ -0.54
SMARCD1-202ENST00000394963 CNFNQ9BYD5 112 aa11.67□□□□□ -0.54
SMARCD1-202ENST00000394963 DLEU1O43261 78 aa11.66□□□□□ -0.54
SMARCD1-202ENST00000394963 CRYGDP07320 174 aa11.66□□□□□ -0.54
SMARCD1-202ENST00000394963 PSMB2P49721 201 aa11.66□□□□□ -0.54
SMARCD1-202ENST00000394963 RPL36AP83881 106 aaKnown RBP11.66□□□□□ -0.54
SMARCD1-202ENST00000394963 RPL36ALQ969Q0 106 aaKnown RBP11.66□□□□□ -0.54
SMARCD1-202ENST00000394963 A8MWV9 139 aa11.66□□□□□ -0.54
SMARCD1-202ENST00000394963 PLNP26678 52 aa11.66□□□□□ -0.54
SMARCD1-202ENST00000394963 CRLF1O75462 422 aa11.65□□□□□ -0.54
SMARCD1-202ENST00000394963 FSHBP01225 129 aa11.65□□□□□ -0.54
SMARCD1-202ENST00000394963 HILS1P60008 231 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms