RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 GAGE4Q13068 117 aa12.28□□□□□ -0.44
PHTF1-205ENST00000393357 FAM208BQ5VWN6 2430 aa12.28□□□□□ -0.44
PHTF1-205ENST00000393357 IGHV3-33P01772 117 aa12.28□□□□□ -0.44
PHTF1-205ENST00000393357 IFITM1P13164 125 aa12.28□□□□□ -0.44
PHTF1-205ENST00000393357 ZNF876PQ49A33 203 aa12.28□□□□□ -0.44
PHTF1-205ENST00000393357 CACNA1AO00555 2505 aa12.28□□□□□ -0.44
PHTF1-205ENST00000393357 ITPR1Q14643 2758 aa12.27□□□□□ -0.44
PHTF1-205ENST00000393357 TMEM95Q3KNT9 176 aa12.27□□□□□ -0.44
PHTF1-205ENST00000393357 LINC01620Q4KN68 170 aa12.27□□□□□ -0.45
PHTF1-205ENST00000393357 TMEM262E9PQX1 116 aa12.26□□□□□ -0.45
PHTF1-205ENST00000393357 TRIAP1O43715 76 aa12.26□□□□□ -0.45
PHTF1-205ENST00000393357 PROK1P58294 105 aa12.26□□□□□ -0.45
PHTF1-205ENST00000393357 RHPN1-AS1Q9BWJ2 59 aa12.26□□□□□ -0.45
PHTF1-205ENST00000393357 ODF3BA8MYP8 253 aa12.26□□□□□ -0.45
PHTF1-205ENST00000393357 VCX2Q9H322 139 aa12.26□□□□□ -0.45
PHTF1-205ENST00000393357 IGHV3-38A0A0C4DH36 116 aa12.26□□□□□ -0.45
PHTF1-205ENST00000393357 IGIPA6NJ69 53 aa12.26□□□□□ -0.45
PHTF1-205ENST00000393357 SPINK13Q1W4C9 94 aa12.26□□□□□ -0.45
PHTF1-205ENST00000393357 MEIG1Q5JSS6 88 aa12.26□□□□□ -0.45
PHTF1-205ENST00000393357 LY6G5BQ8NDX9 201 aa12.26□□□□□ -0.45
PHTF1-205ENST00000393357 VCYO14598 125 aa12.25□□□□□ -0.45
PHTF1-205ENST00000393357 UBE2E1P51965 193 aa12.25□□□□□ -0.45
PHTF1-205ENST00000393357 TRAV41A0A0B4J266 112 aa12.25□□□□□ -0.45
PHTF1-205ENST00000393357 SRSF2Q01130 221 aaKnown RBP12.25□□□□□ -0.45
PHTF1-205ENST00000393357 Q9UF83 564 aa12.25□□□□□ -0.45
PHTF1-205ENST00000393357 HIST2H2BDQ6DRA6 164 aa12.24□□□□□ -0.45
PHTF1-205ENST00000393357 PIP4P1Q86T03 277 aa12.24□□□□□ -0.45
PHTF1-205ENST00000393357 C9orf139Q6ZV77 190 aa12.24□□□□□ -0.45
PHTF1-205ENST00000393357 H3BMM0 161 aa12.23□□□□□ -0.45
PHTF1-205ENST00000393357 BLCAPP62952 87 aa12.23□□□□□ -0.45
PHTF1-205ENST00000393357 FOXC1Q12948 553 aa12.23□□□□□ -0.45
PHTF1-205ENST00000393357 UBE2WQ96B02 151 aa12.23□□□□□ -0.45
PHTF1-205ENST00000393357 BPESC1Q9GZL8 116 aa12.23□□□□□ -0.45
PHTF1-205ENST00000393357 CD28P10747 220 aa12.22□□□□□ -0.45
PHTF1-205ENST00000393357 ZNF22P17026 224 aaPredicted RBP12.22□□□□□ -0.45
PHTF1-205ENST00000393357 ATXN8Q156A1 80 aa12.22□□□□□ -0.45
PHTF1-205ENST00000393357 TRBV7-9A0A0J9YWB2 115 aa12.22□□□□□ -0.45
PHTF1-205ENST00000393357 ADAMTSL4-AS1Q5T5F5 129 aa12.22□□□□□ -0.45
PHTF1-205ENST00000393357 Q8N6K4 173 aa12.22□□□□□ -0.45
PHTF1-205ENST00000393357 ACACBO00763 2458 aa12.22□□□□□ -0.45
PHTF1-205ENST00000393357 FN1P02751 2386 aaKnown RBP12.21□□□□□ -0.45
PHTF1-205ENST00000393357 M0R1W7 72 aa12.21□□□□□ -0.46
PHTF1-205ENST00000393357 RHODO00212 210 aa12.21□□□□□ -0.46
PHTF1-205ENST00000393357 TMEM263Q8WUH6 116 aaKnown RBP12.21□□□□□ -0.46
PHTF1-205ENST00000393357 UTP20O75691 2785 aaKnown RBP12.2□□□□□ -0.46
PHTF1-205ENST00000393357 IGHV3-16A0A0C4DH30 117 aa12.2□□□□□ -0.46
PHTF1-205ENST00000393357 RPL32P62910 135 aaKnown RBP12.2□□□□□ -0.46
PHTF1-205ENST00000393357 IGHV4-4A0A075B6R2 117 aa12.2□□□□□ -0.46
PHTF1-205ENST00000393357 CCDC168Q8NDH2 2452 aa12.19□□□□□ -0.46
PHTF1-205ENST00000393357 TRBV7-1A0A0A6YYK4 115 aa12.19□□□□□ -0.46
PHTF1-205ENST00000393357 CENPVL3A0A0U1RRI6 287 aa12.19□□□□□ -0.46
PHTF1-205ENST00000393357 MINOS1Q5TGZ0 78 aa12.19□□□□□ -0.46
PHTF1-205ENST00000393357 ODF3Q96PU9 254 aa12.19□□□□□ -0.46
PHTF1-205ENST00000393357 A0A0J9YXY3 114 aa12.19□□□□□ -0.46
PHTF1-205ENST00000393357 A0A1W2PPR1 153 aa12.19□□□□□ -0.46
PHTF1-205ENST00000393357 IGHV3-30-3P0DP02 117 aa12.19□□□□□ -0.46
PHTF1-205ENST00000393357 C10orf99Q6UWK7 81 aa12.19□□□□□ -0.46
PHTF1-205ENST00000393357 CITED1Q99966 193 aa12.19□□□□□ -0.46
PHTF1-205ENST00000393357 TIMM21Q9BVV7 248 aa12.19□□□□□ -0.46
PHTF1-205ENST00000393357 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.18□□□□□ -0.46
PHTF1-205ENST00000393357 IGKV2-29A2NJV5 120 aaPredicted RBP12.18□□□□□ -0.46
PHTF1-205ENST00000393357 POLR2KP53803 58 aaKnown RBP12.18□□□□□ -0.46
PHTF1-205ENST00000393357 LINC00315P59091 139 aa12.18□□□□□ -0.46
PHTF1-205ENST00000393357 PAPPA-AS1Q5QFB9 102 aa12.18□□□□□ -0.46
PHTF1-205ENST00000393357 SYNJ2BPP57105 145 aa12.18□□□□□ -0.46
PHTF1-205ENST00000393357 AMELXQ99217 191 aa12.18□□□□□ -0.46
PHTF1-205ENST00000393357 OVOL1O14753 267 aa12.18□□□□□ -0.46
PHTF1-205ENST00000393357 MRPL23Q16540 153 aaKnown RBP12.18□□□□□ -0.46
PHTF1-205ENST00000393357 M0R2P5 195 aa12.17□□□□□ -0.46
PHTF1-205ENST00000393357 ITLN2Q8WWU7 325 aaPredicted RBP12.17□□□□□ -0.46
PHTF1-205ENST00000393357 NDUFA12Q9UI09 145 aa12.17□□□□□ -0.46
PHTF1-205ENST00000393357 NAV2Q8IVL1 2488 aa12.17□□□□□ -0.46
PHTF1-205ENST00000393357 LINC01619G3V211 115 aa12.16□□□□□ -0.46
PHTF1-205ENST00000393357 MYO18BQ8IUG5 2567 aa12.16□□□□□ -0.46
PHTF1-205ENST00000393357 NPFFO15130 113 aa12.16□□□□□ -0.46
PHTF1-205ENST00000393357 RPL13AP40429 203 aaKnown RBP12.16□□□□□ -0.46
PHTF1-205ENST00000393357 EPG5Q9HCE0 2579 aa12.15□□□□□ -0.46
PHTF1-205ENST00000393357 TMEM223A0PJW6 202 aa12.15□□□□□ -0.46
PHTF1-205ENST00000393357 H7C423 109 aa12.15□□□□□ -0.46
PHTF1-205ENST00000393357 C5orf56Q8N8D9 126 aa12.15□□□□□ -0.46
PHTF1-205ENST00000393357 ICOSQ9Y6W8 199 aa12.15□□□□□ -0.46
PHTF1-205ENST00000393357 FAM236AA0A1B0GUQ0 79 aa12.15□□□□□ -0.47
PHTF1-205ENST00000393357 FAM236BA0A1B0GV22 79 aa12.15□□□□□ -0.47
PHTF1-205ENST00000393357 H3BUX3 64 aa12.15□□□□□ -0.47
PHTF1-205ENST00000393357 FBN2P35556 2912 aa12.14□□□□□ -0.47
PHTF1-205ENST00000393357 LEPROTO15243 131 aa12.14□□□□□ -0.47
PHTF1-205ENST00000393357 COX6CP09669 75 aa12.14□□□□□ -0.47
PHTF1-205ENST00000393357 HOXD3P31249 432 aaPredicted RBP12.14□□□□□ -0.47
PHTF1-205ENST00000393357 TMEM141Q96I45 108 aa12.14□□□□□ -0.47
PHTF1-205ENST00000393357 KIF25-AS1Q9Y6Z4 181 aa12.14□□□□□ -0.47
PHTF1-205ENST00000393357 PPP1R17O96001 155 aa12.14□□□□□ -0.47
PHTF1-205ENST00000393357 SIRPDQ9H106 197 aa12.14□□□□□ -0.47
PHTF1-205ENST00000393357 MINOS1-NBL1R4GNA1 71 aa12.14□□□□□ -0.47
PHTF1-205ENST00000393357 IGHV3OR16-12A0A075B7B8 117 aa12.13□□□□□ -0.47
PHTF1-205ENST00000393357 IGKV3OR2-268A0A0C4DH90 116 aa12.13□□□□□ -0.47
PHTF1-205ENST00000393357 KLK5Q9Y337 293 aaPredicted RBP12.13□□□□□ -0.47
PHTF1-205ENST00000393357 TRGV11A0A075B6L2 103 aa12.13□□□□□ -0.47
PHTF1-205ENST00000393357 IGLV4-3A0A075B6K6 122 aa12.13□□□□□ -0.47
PHTF1-205ENST00000393357 TRBV10-2A0A0K0K1G8 114 aa12.13□□□□□ -0.47
PHTF1-205ENST00000393357 TMEM190Q8WZ59 177 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 706.7 ms