RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 FAM231AP0DMU4 169 aa8.74□□□□□ -1.01
USP3-202ENST00000380324 FAM231CP0DMU5 169 aa8.74□□□□□ -1.01
USP3-202ENST00000380324 ZFP2Q6ZN57 461 aa8.74□□□□□ -1.01
USP3-202ENST00000380324 C11orf72Q8NBR9 251 aa8.74□□□□□ -1.01
USP3-202ENST00000380324 RPL39P62891 51 aaKnown RBP8.74□□□□□ -1.01
USP3-202ENST00000380324 MPV17L2Q567V2 206 aa8.74□□□□□ -1.01
USP3-202ENST00000380324 PCP2Q8IVA1 136 aa8.74□□□□□ -1.01
USP3-202ENST00000380324 ZMAT4Q9H898 229 aa8.74□□□□□ -1.01
USP3-202ENST00000380324 CYSLTR1Q9Y271 337 aa8.74□□□□□ -1.01
USP3-202ENST00000380324 A0A087WX48 190 aa8.73□□□□□ -1.01
USP3-202ENST00000380324 TRBV6-5A0A0K0K1A5 114 aa8.73□□□□□ -1.01
USP3-202ENST00000380324 TRBV27A0A0K0K1C4 114 aa8.73□□□□□ -1.01
USP3-202ENST00000380324 FGF6P10767 208 aa8.73□□□□□ -1.01
USP3-202ENST00000380324 AZU1P20160 251 aa8.73□□□□□ -1.01
USP3-202ENST00000380324 RPL32P62910 135 aaKnown RBP8.73□□□□□ -1.01
USP3-202ENST00000380324 COL5A1-AS1Q5SY13 56 aa8.73□□□□□ -1.01
USP3-202ENST00000380324 ZC2HC1BQ5TFG8 222 aa8.73□□□□□ -1.01
USP3-202ENST00000380324 NDUFA11Q86Y39 141 aa8.73□□□□□ -1.01
USP3-202ENST00000380324 HHLA3Q9XRX5 114 aa8.73□□□□□ -1.01
USP3-202ENST00000380324 IGKV2D-26A0A0A0MRZ7 120 aa8.72□□□□□ -1.01
USP3-202ENST00000380324 RPL35AP18077 110 aaKnown RBP8.72□□□□□ -1.01
USP3-202ENST00000380324 C2orf91Q6ZV80 131 aa8.72□□□□□ -1.01
USP3-202ENST00000380324 GTSCR1Q86UQ5 136 aa8.72□□□□□ -1.01
USP3-202ENST00000380324 C1orf158Q8N1D5 194 aa8.72□□□□□ -1.01
USP3-202ENST00000380324 BAALCQ8WXS3 180 aa8.72□□□□□ -1.01
USP3-202ENST00000380324 CLUHP3Q96NS8 147 aa8.72□□□□□ -1.01
USP3-202ENST00000380324 ATRQ13535 2644 aa8.72□□□□□ -1.01
USP3-202ENST00000380324 A8MWV9 139 aa8.72□□□□□ -1.01
USP3-202ENST00000380324 ERASQ7Z444 233 aa8.72□□□□□ -1.01
USP3-202ENST00000380324 LURAP1LQ8IV03 231 aa8.72□□□□□ -1.01
USP3-202ENST00000380324 TTTY13Q9BZ97 58 aa8.72□□□□□ -1.01
USP3-202ENST00000380324 F8P00451 2351 aa8.72□□□□□ -1.01
USP3-202ENST00000380324 A6NJY4 79 aa8.71□□□□□ -1.01
USP3-202ENST00000380324 F8VRH5 84 aa8.71□□□□□ -1.01
USP3-202ENST00000380324 CFAP126Q5VTH2 177 aa8.71□□□□□ -1.02
USP3-202ENST00000380324 NEXN-AS1Q8NBZ9 246 aa8.71□□□□□ -1.02
USP3-202ENST00000380324 LINC00467Q9BRT7 94 aa8.71□□□□□ -1.02
USP3-202ENST00000380324 CHTOPQ9Y3Y2 248 aaKnown RBP8.71□□□□□ -1.02
USP3-202ENST00000380324 H7C1H1 209 aa8.7□□□□□ -1.02
USP3-202ENST00000380324 PLNP26678 52 aa8.7□□□□□ -1.02
USP3-202ENST00000380324 BOD1L2Q8IYS8 172 aa8.7□□□□□ -1.02
USP3-202ENST00000380324 Q9UF83 564 aa8.7□□□□□ -1.02
USP3-202ENST00000380324 TRAV12-1A0A0B4J245 112 aa8.7□□□□□ -1.02
USP3-202ENST00000380324 UFSP1Q6NVU6 142 aa8.7□□□□□ -1.02
USP3-202ENST00000380324 Q6ZSN1 163 aa8.7□□□□□ -1.02
USP3-202ENST00000380324 LINC00482Q8N8I6 264 aa8.7□□□□□ -1.02
USP3-202ENST00000380324 C19orf73Q9NVV2 129 aa8.7□□□□□ -1.02
USP3-202ENST00000380324 TRGV1A0A0A0MS02 117 aa8.69□□□□□ -1.02
USP3-202ENST00000380324 TSHBP01222 138 aa8.69□□□□□ -1.02
USP3-202ENST00000380324 G0S2P27469 103 aa8.69□□□□□ -1.02
USP3-202ENST00000380324 BEAN1Q3B7T3 259 aa8.69□□□□□ -1.02
USP3-202ENST00000380324 SPXQ9BT56 116 aa8.69□□□□□ -1.02
USP3-202ENST00000380324 PRSS29PA6NIE9 313 aa8.69□□□□□ -1.02
USP3-202ENST00000380324 I3L3M4 83 aa8.69□□□□□ -1.02
USP3-202ENST00000380324 GIG44P09565 113 aaPredicted RBP8.69□□□□□ -1.02
USP3-202ENST00000380324 EMP1P54849 157 aa8.69□□□□□ -1.02
USP3-202ENST00000380324 BVES-AS1Q5T3Y7 98 aa8.69□□□□□ -1.02
USP3-202ENST00000380324 Q6ZVH6 145 aa8.69□□□□□ -1.02
USP3-202ENST00000380324 RNASE8Q8TDE3 154 aaKnown RBP8.69□□□□□ -1.02
USP3-202ENST00000380324 IGIPA6NJ69 53 aa8.68□□□□□ -1.02
USP3-202ENST00000380324 RIPPLY3P57055 190 aa8.68□□□□□ -1.02
USP3-202ENST00000380324 SPATA3Q8NHX4 192 aa8.68□□□□□ -1.02
USP3-202ENST00000380324 TEP1Q99973 2627 aaKnown RBP8.68□□□□□ -1.02
USP3-202ENST00000380324 CMC4P56277 68 aaPredicted RBP8.68□□□□□ -1.02
USP3-202ENST00000380324 PIK3CD-AS1Q5SR53 167 aa8.68□□□□□ -1.02
USP3-202ENST00000380324 C12orf54Q6X4T0 127 aa8.68□□□□□ -1.02
USP3-202ENST00000380324 TNFRSF18Q9Y5U5 241 aa8.68□□□□□ -1.02
USP3-202ENST00000380324 TRAV8-6A0A0B4J262 113 aa8.67□□□□□ -1.02
USP3-202ENST00000380324 RHODO00212 210 aa8.67□□□□□ -1.02
USP3-202ENST00000380324 ZNF25P17030 456 aaPredicted RBP8.67□□□□□ -1.02
USP3-202ENST00000380324 RHOHQ15669 191 aa8.67□□□□□ -1.02
USP3-202ENST00000380324 TMEM263Q8WUH6 116 aaKnown RBP8.67□□□□□ -1.02
USP3-202ENST00000380324 CRLF1O75462 422 aa8.66□□□□□ -1.02
USP3-202ENST00000380324 Q6ZTI0 123 aa8.66□□□□□ -1.02
USP3-202ENST00000380324 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.66□□□□□ -1.02
USP3-202ENST00000380324 IL17DQ8TAD2 202 aa8.66□□□□□ -1.02
USP3-202ENST00000380324 OPRPNQ99935 248 aaPredicted RBP8.66□□□□□ -1.02
USP3-202ENST00000380324 FAM110AQ9BQ89 295 aa8.66□□□□□ -1.02
USP3-202ENST00000380324 IGHV3-53P01767 116 aa8.66□□□□□ -1.02
USP3-202ENST00000380324 TMEM97Q5BJF2 176 aa8.66□□□□□ -1.02
USP3-202ENST00000380324 PTH2Q96A98 100 aa8.66□□□□□ -1.02
USP3-202ENST00000380324 TIMM17AQ99595 171 aa8.66□□□□□ -1.02
USP3-202ENST00000380324 EDA2RQ9HAV5 297 aa8.66□□□□□ -1.02
USP3-202ENST00000380324 TRRAPQ9Y4A5 3859 aa8.65□□□□□ -1.02
USP3-202ENST00000380324 C20orf203Q8NBC4 194 aa8.65□□□□□ -1.02
USP3-202ENST00000380324 NOP10Q9NPE3 64 aaKnown RBP8.65□□□□□ -1.02
USP3-202ENST00000380324 IGHV3-38A0A0C4DH36 116 aa8.65□□□□□ -1.03
USP3-202ENST00000380324 LINC01549A6NIU2 74 aa8.65□□□□□ -1.03
USP3-202ENST00000380324 RS1O15537 224 aa8.65□□□□□ -1.03
USP3-202ENST00000380324 DLEU1O43261 78 aa8.65□□□□□ -1.03
USP3-202ENST00000380324 PMVKQ15126 192 aa8.65□□□□□ -1.03
USP3-202ENST00000380324 OR4C5Q8NGB2 326 aa8.65□□□□□ -1.03
USP3-202ENST00000380324 PHLDA1Q8WV24 401 aaPredicted RBP8.65□□□□□ -1.03
USP3-202ENST00000380324 TMEM141Q96I45 108 aa8.65□□□□□ -1.03
USP3-202ENST00000380324 ZNF479Q96JC4 524 aa8.65□□□□□ -1.03
USP3-202ENST00000380324 IGLV4-69A0A075B6H9 119 aa8.64□□□□□ -1.03
USP3-202ENST00000380324 LINC00469Q8N7U9 141 aa8.64□□□□□ -1.03
USP3-202ENST00000380324 CST9LQ9H4G1 147 aa8.64□□□□□ -1.03
USP3-202ENST00000380324 ZMAT5Q9UDW3 170 aaKnown RBP8.64□□□□□ -1.03
USP3-202ENST00000380324 C11orf86A6NJI1 115 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms