RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 EPM2AB3EWF7 344 aa16.41■□□□□ 0.22
TNFRSF4-201ENST00000379236 GZMBP10144 247 aa16.41■□□□□ 0.22
TNFRSF4-201ENST00000379236 IGKV2D-24A0A075B6R9 120 aa16.4■□□□□ 0.22
TNFRSF4-201ENST00000379236 RBFOX3A6NFN3 312 aa16.4■□□□□ 0.22
TNFRSF4-201ENST00000379236 IGLV2-8P01709 118 aa16.4■□□□□ 0.22
TNFRSF4-201ENST00000379236 MGPP08493 103 aa16.4■□□□□ 0.22
TNFRSF4-201ENST00000379236 TRBV6-8A0A0A6YYG3 113 aa16.39■□□□□ 0.21
TNFRSF4-201ENST00000379236 XGP55808 180 aa16.39■□□□□ 0.21
TNFRSF4-201ENST00000379236 CACNG7P62955 275 aa16.39■□□□□ 0.21
TNFRSF4-201ENST00000379236 UBE2WQ96B02 151 aa16.39■□□□□ 0.21
TNFRSF4-201ENST00000379236 C19orf71A6NCJ1 209 aa16.38■□□□□ 0.21
TNFRSF4-201ENST00000379236 LECT2O14960 151 aa16.38■□□□□ 0.21
TNFRSF4-201ENST00000379236 TMEM97Q5BJF2 176 aa16.38■□□□□ 0.21
TNFRSF4-201ENST00000379236 IGLC6P0CF74 106 aa16.37■□□□□ 0.21
TNFRSF4-201ENST00000379236 PKIAP61925 76 aa16.37■□□□□ 0.21
TNFRSF4-201ENST00000379236 FRZBQ92765 325 aa16.37■□□□□ 0.21
TNFRSF4-201ENST00000379236 CHCHD5Q9BSY4 110 aa16.37■□□□□ 0.21
TNFRSF4-201ENST00000379236 H7C1H1 209 aa16.36■□□□□ 0.21
TNFRSF4-201ENST00000379236 CRPP02741 224 aa16.36■□□□□ 0.21
TNFRSF4-201ENST00000379236 C9orf62Q8N4C0 152 aa16.36■□□□□ 0.21
TNFRSF4-201ENST00000379236 F2Z2F3 143 aa16.35■□□□□ 0.21
TNFRSF4-201ENST00000379236 Q0VG73 95 aa16.35■□□□□ 0.21
TNFRSF4-201ENST00000379236 BAALCQ8WXS3 180 aa16.35■□□□□ 0.21
TNFRSF4-201ENST00000379236 TMEM70Q9BUB7 260 aa16.35■□□□□ 0.21
TNFRSF4-201ENST00000379236 KIF25-AS1Q9Y6Z4 181 aa16.35■□□□□ 0.21
TNFRSF4-201ENST00000379236 TRBV20OR9-2A0A075B6H5 130 aa16.34■□□□□ 0.21
TNFRSF4-201ENST00000379236 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF4-201ENST00000379236 TRGC1P0CF51 173 aa16.34■□□□□ 0.21
TNFRSF4-201ENST00000379236 WFDC2Q14508 124 aa16.34■□□□□ 0.21
TNFRSF4-201ENST00000379236 BLOC1S1P78537 153 aa16.33■□□□□ 0.2
TNFRSF4-201ENST00000379236 C15orf54Q8N8G6 183 aa16.33■□□□□ 0.2
TNFRSF4-201ENST00000379236 ANGP03950 147 aaKnown RBP16.32■□□□□ 0.2
TNFRSF4-201ENST00000379236 LYZL1Q6UWQ5 148 aa16.32■□□□□ 0.2
TNFRSF4-201ENST00000379236 ALKAL2Q6UX46 152 aa16.32■□□□□ 0.2
TNFRSF4-201ENST00000379236 DNAJC30Q96LL9 226 aa16.32■□□□□ 0.2
TNFRSF4-201ENST00000379236 MPV17L2Q567V2 206 aa16.31■□□□□ 0.2
TNFRSF4-201ENST00000379236 Q5VSD8 79 aa16.31■□□□□ 0.2
TNFRSF4-201ENST00000379236 Q8N976 141 aa16.31■□□□□ 0.2
TNFRSF4-201ENST00000379236 C1orf43Q9BWL3 253 aa16.31■□□□□ 0.2
TNFRSF4-201ENST00000379236 TRBV25-1A0A075B6N4 114 aa16.3■□□□□ 0.2
TNFRSF4-201ENST00000379236 SUMO4Q6EEV6 95 aa16.3■□□□□ 0.2
TNFRSF4-201ENST00000379236 NUDT10Q8NFP7 164 aa16.3■□□□□ 0.2
TNFRSF4-201ENST00000379236 NUDT11Q96G61 164 aa16.3■□□□□ 0.2
TNFRSF4-201ENST00000379236 HAMPP81172 84 aa16.29■□□□□ 0.2
TNFRSF4-201ENST00000379236 DPH3P1Q9H4G8 78 aa16.29■□□□□ 0.2
TNFRSF4-201ENST00000379236 RPP21Q9H633 154 aaKnown RBP16.29■□□□□ 0.2
TNFRSF4-201ENST00000379236 M0QY20 66 aa16.28■□□□□ 0.2
TNFRSF4-201ENST00000379236 SMR3BP02814 79 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF4-201ENST00000379236 NTF3P20783 257 aa16.28■□□□□ 0.2
TNFRSF4-201ENST00000379236 IGHV1-24A0A0C4DH33 117 aa16.27■□□□□ 0.2
TNFRSF4-201ENST00000379236 FAM229AH3BQW9 127 aa16.27■□□□□ 0.2
TNFRSF4-201ENST00000379236 RNASE7Q9H1E1 156 aaKnown RBP16.27■□□□□ 0.2
TNFRSF4-201ENST00000379236 CEBPGP53567 150 aa16.26■□□□□ 0.19
TNFRSF4-201ENST00000379236 GAGE6Q13070 117 aa16.26■□□□□ 0.19
TNFRSF4-201ENST00000379236 TWIST1Q15672 202 aa16.26■□□□□ 0.19
TNFRSF4-201ENST00000379236 RASL11AQ6T310 242 aa16.26■□□□□ 0.19
TNFRSF4-201ENST00000379236 ATRAIDQ6UW56 229 aa16.26■□□□□ 0.19
TNFRSF4-201ENST00000379236 NTM-AS1Q6ZSK4 140 aa16.26■□□□□ 0.19
TNFRSF4-201ENST00000379236 OCC1Q8TAD7 63 aa16.26■□□□□ 0.19
TNFRSF4-201ENST00000379236 TMEM250H0YL14 139 aa16.25■□□□□ 0.19
TNFRSF4-201ENST00000379236 CTRLP40313 264 aa16.25■□□□□ 0.19
TNFRSF4-201ENST00000379236 NKX2-5P52952 324 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF4-201ENST00000379236 WDR73Q6P4I2 378 aa16.25■□□□□ 0.19
TNFRSF4-201ENST00000379236 ENHOQ6UWT2 76 aa16.25■□□□□ 0.19
TNFRSF4-201ENST00000379236 INAFM2P0DMQ5 153 aa16.24■□□□□ 0.19
TNFRSF4-201ENST00000379236 C14orf177Q52M58 125 aa16.24■□□□□ 0.19
TNFRSF4-201ENST00000379236 K7EN84 100 aa16.23■□□□□ 0.19
TNFRSF4-201ENST00000379236 MIAQ16674 131 aa16.23■□□□□ 0.19
TNFRSF4-201ENST00000379236 SMIM15Q7Z3B0 74 aa16.23■□□□□ 0.19
TNFRSF4-201ENST00000379236 HLA-DQA1P01909 254 aa16.22■□□□□ 0.19
TNFRSF4-201ENST00000379236 RBX1P62877 108 aa16.22■□□□□ 0.19
TNFRSF4-201ENST00000379236 IQCJQ1A5X6 159 aa16.22■□□□□ 0.19
TNFRSF4-201ENST00000379236 NIT2Q9NQR4 276 aa16.22■□□□□ 0.19
TNFRSF4-201ENST00000379236 GATCO43716 136 aaKnown RBP16.21■□□□□ 0.19
TNFRSF4-201ENST00000379236 CLPSL2Q6UWE3 100 aa16.21■□□□□ 0.19
TNFRSF4-201ENST00000379236 EIF5A2Q9GZV4 153 aaKnown RBP16.21■□□□□ 0.19
TNFRSF4-201ENST00000379236 FAM30AQ9NZY2 134 aa16.21■□□□□ 0.19
TNFRSF4-201ENST00000379236 TMEM243Q9BU79 118 aa16.2■□□□□ 0.18
TNFRSF4-201ENST00000379236 VPS13BQ7Z7G8 4022 aa16.2■□□□□ 0.18
TNFRSF4-201ENST00000379236 DNAH8Q96JB1 4490 aa16.19■□□□□ 0.18
TNFRSF4-201ENST00000379236 FAT1Q14517 4588 aa16.19■□□□□ 0.18
TNFRSF4-201ENST00000379236 UBE2L6O14933 153 aa16.19■□□□□ 0.18
TNFRSF4-201ENST00000379236 LINC00269Q8N2A0 174 aa16.19■□□□□ 0.18
TNFRSF4-201ENST00000379236 CNFNQ9BYD5 112 aa16.19■□□□□ 0.18
TNFRSF4-201ENST00000379236 LYPD6BQ8NI32 183 aa16.18■□□□□ 0.18
TNFRSF4-201ENST00000379236 COTL1Q14019 142 aa16.17■□□□□ 0.18
TNFRSF4-201ENST00000379236 LINC01620Q4KN68 170 aa16.17■□□□□ 0.18
TNFRSF4-201ENST00000379236 BORCS7Q96B45 105 aa16.17■□□□□ 0.18
TNFRSF4-201ENST00000379236 PGLYRP4Q96LB8 373 aa16.17■□□□□ 0.18
TNFRSF4-201ENST00000379236 A8MWL6 223 aa16.16■□□□□ 0.18
TNFRSF4-201ENST00000379236 FAM231DQ6ZW35 169 aa16.16■□□□□ 0.18
TNFRSF4-201ENST00000379236 PRR34Q9NV39 138 aa16.16■□□□□ 0.18
TNFRSF4-201ENST00000379236 AMTP48728 403 aa16.15■□□□□ 0.18
TNFRSF4-201ENST00000379236 GTSF1Q8WW33 167 aa16.15■□□□□ 0.18
TNFRSF4-201ENST00000379236 SMIM7Q9BQ49 75 aa16.15■□□□□ 0.18
TNFRSF4-201ENST00000379236 USP17L23D6RBM5 183 aa16.14■□□□□ 0.17
TNFRSF4-201ENST00000379236 REG3AQ06141 175 aa16.14■□□□□ 0.17
TNFRSF4-201ENST00000379236 Q6ZSA8 131 aa16.14■□□□□ 0.17
TNFRSF4-201ENST00000379236 DEFB104AQ8WTQ1 72 aa16.14■□□□□ 0.17
TNFRSF4-201ENST00000379236 TRAV26-2A0A0B4J265 109 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms