RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 SDIM1Q6ZPB5 146 aa8.84□□□□□ -0.99
CXCL12-202ENST00000374426 RNF213Q63HN8 5207 aa8.84□□□□□ -0.99
CXCL12-202ENST00000374426 AKR1C3P42330 323 aa8.83□□□□□ -1
CXCL12-202ENST00000374426 RBX1P62877 108 aa8.83□□□□□ -1
CXCL12-202ENST00000374426 LINC00269Q8N2A0 174 aa8.83□□□□□ -1
CXCL12-202ENST00000374426 ZNF471Q9BX82 626 aaPredicted RBP8.83□□□□□ -1
CXCL12-202ENST00000374426 VAX2Q9UIW0 290 aa8.83□□□□□ -1
CXCL12-202ENST00000374426 MUC21A0A0G2JKD1 596 aa8.82□□□□□ -1
CXCL12-202ENST00000374426 MUC21A0A140T8X8 626 aa8.82□□□□□ -1
CXCL12-202ENST00000374426 SNAI2O43623 268 aa8.82□□□□□ -1
CXCL12-202ENST00000374426 CXCL1P09341 107 aa8.82□□□□□ -1
CXCL12-202ENST00000374426 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.82□□□□□ -1
CXCL12-202ENST00000374426 SSBP4Q9BWG4 385 aaPredicted RBP8.82□□□□□ -1
CXCL12-202ENST00000374426 TNXBP22105 4242 aa8.82□□□□□ -1
CXCL12-202ENST00000374426 F5H697 171 aa8.81□□□□□ -1
CXCL12-202ENST00000374426 GAGE6Q13070 117 aa8.81□□□□□ -1
CXCL12-202ENST00000374426 CIRBPQ14011 172 aaKnown RBP8.81□□□□□ -1
CXCL12-202ENST00000374426 TMEM97Q5BJF2 176 aa8.81□□□□□ -1
CXCL12-202ENST00000374426 STOML3Q8TAV4 291 aa8.81□□□□□ -1
CXCL12-202ENST00000374426 DERL1Q9BUN8 251 aa8.81□□□□□ -1
CXCL12-202ENST00000374426 MLST8Q9BVC4 326 aa8.81□□□□□ -1
CXCL12-202ENST00000374426 KIF25-AS1Q9Y6Z4 181 aa8.81□□□□□ -1
CXCL12-202ENST00000374426 PAGE4O60829 102 aa8.8□□□□□ -1
CXCL12-202ENST00000374426 OR5AL1P0C617 328 aa8.8□□□□□ -1
CXCL12-202ENST00000374426 SPANXN1Q5VSR9 72 aa8.8□□□□□ -1
CXCL12-202ENST00000374426 CYTL1Q9NRR1 136 aa8.8□□□□□ -1
CXCL12-202ENST00000374426 IGLV10-54A0A075B6I4 117 aa8.79□□□□□ -1
CXCL12-202ENST00000374426 TRBV25-1A0A075B6N4 114 aa8.79□□□□□ -1
CXCL12-202ENST00000374426 A0A0D9SG52 128 aa8.79□□□□□ -1
CXCL12-202ENST00000374426 SCO2A0A1W2PP80 73 aa8.79□□□□□ -1
CXCL12-202ENST00000374426 G3V3Q6 166 aa8.79□□□□□ -1
CXCL12-202ENST00000374426 SSTP61278 116 aa8.79□□□□□ -1
CXCL12-202ENST00000374426 CNBPP62633 177 aaKnown RBP8.79□□□□□ -1
CXCL12-202ENST00000374426 IQCJQ1A5X6 159 aa8.79□□□□□ -1
CXCL12-202ENST00000374426 Q6ZRU5 148 aa8.79□□□□□ -1
CXCL12-202ENST00000374426 CLRN3Q8NCR9 226 aa8.79□□□□□ -1
CXCL12-202ENST00000374426 S100A9P06702 114 aaKnown RBP8.78□□□□□ -1
CXCL12-202ENST00000374426 REG3AQ06141 175 aa8.78□□□□□ -1
CXCL12-202ENST00000374426 BAGE2Q86Y30 109 aa8.78□□□□□ -1
CXCL12-202ENST00000374426 hDV102S1A0JD36 115 aa8.77□□□□□ -1.01
CXCL12-202ENST00000374426 C20orf203Q8NBC4 194 aa8.77□□□□□ -1.01
CXCL12-202ENST00000374426 AP1S3Q96PC3 154 aa8.77□□□□□ -1.01
CXCL12-202ENST00000374426 IGHV1-24A0A0C4DH33 117 aa8.76□□□□□ -1.01
CXCL12-202ENST00000374426 M0QY20 66 aa8.76□□□□□ -1.01
CXCL12-202ENST00000374426 ARPC5O15511 151 aa8.76□□□□□ -1.01
CXCL12-202ENST00000374426 SLPIP03973 132 aa8.76□□□□□ -1.01
CXCL12-202ENST00000374426 CHTF8P0CG12 524 aa8.76□□□□□ -1.01
CXCL12-202ENST00000374426 SMIM17P0DL12 118 aa8.76□□□□□ -1.01
CXCL12-202ENST00000374426 SFT2D1Q8WV19 159 aa8.76□□□□□ -1.01
CXCL12-202ENST00000374426 IGLV4-60A0A075B6I1 120 aa8.75□□□□□ -1.01
CXCL12-202ENST00000374426 IGHV3-64A0A075B6Q5 118 aa8.75□□□□□ -1.01
CXCL12-202ENST00000374426 A0A087WYN8 130 aa8.75□□□□□ -1.01
CXCL12-202ENST00000374426 A0A1B0GV50 99 aa8.75□□□□□ -1.01
CXCL12-202ENST00000374426 MBD3L1Q8WWY6 194 aa8.75□□□□□ -1.01
CXCL12-202ENST00000374426 GFRA4Q9GZZ7 299 aa8.75□□□□□ -1.01
CXCL12-202ENST00000374426 TRAV8-4A0A0B4J246 113 aa8.74□□□□□ -1.01
CXCL12-202ENST00000374426 P01737 135 aa8.74□□□□□ -1.01
CXCL12-202ENST00000374426 TMUB2Q71RG4 321 aa8.74□□□□□ -1.01
CXCL12-202ENST00000374426 FAM213BQ8TBF2 198 aa8.74□□□□□ -1.01
CXCL12-202ENST00000374426 SPACA4Q8TDM5 124 aa8.74□□□□□ -1.01
CXCL12-202ENST00000374426 RNF185Q96GF1 192 aa8.74□□□□□ -1.01
CXCL12-202ENST00000374426 A0A1B0GUV1 79 aa8.73□□□□□ -1.01
CXCL12-202ENST00000374426 PFDN1O60925 122 aa8.73□□□□□ -1.01
CXCL12-202ENST00000374426 MGPP08493 103 aa8.73□□□□□ -1.01
CXCL12-202ENST00000374426 RAB5CP51148 216 aa8.73□□□□□ -1.01
CXCL12-202ENST00000374426 SUMO4Q6EEV6 95 aa8.73□□□□□ -1.01
CXCL12-202ENST00000374426 DPH3Q96FX2 82 aa8.73□□□□□ -1.01
CXCL12-202ENST00000374426 AP5S1Q9NUS5 200 aa8.73□□□□□ -1.01
CXCL12-202ENST00000374426 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.72□□□□□ -1.01
CXCL12-202ENST00000374426 H7C1H1 209 aa8.72□□□□□ -1.01
CXCL12-202ENST00000374426 IGLC6P0CF74 106 aa8.72□□□□□ -1.01
CXCL12-202ENST00000374426 GZMBP10144 247 aa8.72□□□□□ -1.01
CXCL12-202ENST00000374426 RPL35P42766 123 aaKnown RBP8.72□□□□□ -1.01
CXCL12-202ENST00000374426 NKX2-5P52952 324 aaPredicted RBP8.72□□□□□ -1.01
CXCL12-202ENST00000374426 TMEM243Q9BU79 118 aa8.72□□□□□ -1.01
CXCL12-202ENST00000374426 TPPP3Q9BW30 176 aa8.72□□□□□ -1.01
CXCL12-202ENST00000374426 UMAD1C9J7I0 102 aa8.71□□□□□ -1.02
CXCL12-202ENST00000374426 PHOX2AO14813 284 aa8.71□□□□□ -1.02
CXCL12-202ENST00000374426 KCNRGQ8N5I3 272 aa8.71□□□□□ -1.02
CXCL12-202ENST00000374426 FER1L6-AS1Q8NA97 138 aa8.71□□□□□ -1.02
CXCL12-202ENST00000374426 PLAC8Q9NZF1 115 aa8.71□□□□□ -1.02
CXCL12-202ENST00000374426 SMLR1H3BR10 107 aa8.7□□□□□ -1.02
CXCL12-202ENST00000374426 RASL11AQ6T310 242 aa8.7□□□□□ -1.02
CXCL12-202ENST00000374426 C15orf56Q8N910 161 aa8.7□□□□□ -1.02
CXCL12-202ENST00000374426 PGLYRP4Q96LB8 373 aa8.7□□□□□ -1.02
CXCL12-202ENST00000374426 H2AFB1P0C5Y9 115 aa8.69□□□□□ -1.02
CXCL12-202ENST00000374426 OR2D3Q8NGH3 330 aa8.69□□□□□ -1.02
CXCL12-202ENST00000374426 C19orf71A6NCJ1 209 aa8.68□□□□□ -1.02
CXCL12-202ENST00000374426 CACNG7P62955 275 aa8.68□□□□□ -1.02
CXCL12-202ENST00000374426 COX6A2Q02221 97 aa8.68□□□□□ -1.02
CXCL12-202ENST00000374426 ZNF345Q14585 488 aa8.68□□□□□ -1.02
CXCL12-202ENST00000374426 CENPWQ5EE01 88 aa8.68□□□□□ -1.02
CXCL12-202ENST00000374426 C7orf33Q8WU49 177 aa8.68□□□□□ -1.02
CXCL12-202ENST00000374426 C11orf52Q96A22 123 aa8.68□□□□□ -1.02
CXCL12-202ENST00000374426 NIT2Q9NQR4 276 aa8.68□□□□□ -1.02
CXCL12-202ENST00000374426 GAGE12HA6NDE8 117 aa8.67□□□□□ -1.02
CXCL12-202ENST00000374426 SULT1A2P50226 295 aa8.67□□□□□ -1.02
CXCL12-202ENST00000374426 RPS20P60866 119 aaKnown RBP8.67□□□□□ -1.02
CXCL12-202ENST00000374426 CCL20P78556 96 aa8.67□□□□□ -1.02
CXCL12-202ENST00000374426 WDR73Q6P4I2 378 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms