RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 VCYO14598 125 aa12.19□□□□□ -0.46
PTPN20-203ENST00000374342 CSNK1G2-AS1Q8NCQ2 148 aa12.19□□□□□ -0.46
PTPN20-203ENST00000374342 KIR2DL4Q99706 377 aa12.19□□□□□ -0.46
PTPN20-203ENST00000374342 MIEN1Q9BRT3 115 aa12.19□□□□□ -0.46
PTPN20-203ENST00000374342 PRSS1P07477 247 aa12.19□□□□□ -0.46
PTPN20-203ENST00000374342 P0DMU3 169 aa12.19□□□□□ -0.46
PTPN20-203ENST00000374342 FAM231AP0DMU4 169 aa12.19□□□□□ -0.46
PTPN20-203ENST00000374342 FAM231CP0DMU5 169 aa12.19□□□□□ -0.46
PTPN20-203ENST00000374342 C2orf66Q6UXQ4 117 aa12.19□□□□□ -0.46
PTPN20-203ENST00000374342 TOMM6Q96B49 74 aa12.19□□□□□ -0.46
PTPN20-203ENST00000374342 C16orf74Q96GX8 76 aa12.19□□□□□ -0.46
PTPN20-203ENST00000374342 TRBV27A0A0K0K1C4 114 aa12.18□□□□□ -0.46
PTPN20-203ENST00000374342 RS1O15537 224 aa12.18□□□□□ -0.46
PTPN20-203ENST00000374342 C14orf144Q96I85 54 aa12.18□□□□□ -0.46
PTPN20-203ENST00000374342 EDA2RQ9HAV5 297 aa12.18□□□□□ -0.46
PTPN20-203ENST00000374342 IGLC3P0DOY3 106 aa12.17□□□□□ -0.46
PTPN20-203ENST00000374342 ZFP2Q6ZN57 461 aa12.17□□□□□ -0.46
PTPN20-203ENST00000374342 Q6ZTI0 123 aa12.17□□□□□ -0.46
PTPN20-203ENST00000374342 SCGB3A1Q96QR1 104 aa12.17□□□□□ -0.46
PTPN20-203ENST00000374342 Q6ZSN1 163 aa12.17□□□□□ -0.46
PTPN20-203ENST00000374342 DKK2Q9UBU2 259 aa12.17□□□□□ -0.46
PTPN20-203ENST00000374342 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.16□□□□□ -0.46
PTPN20-203ENST00000374342 ODF1Q14990 250 aa12.16□□□□□ -0.46
PTPN20-203ENST00000374342 RRN3P1Q2M238 152 aa12.16□□□□□ -0.46
PTPN20-203ENST00000374342 NOP10Q9NPE3 64 aaKnown RBP12.16□□□□□ -0.46
PTPN20-203ENST00000374342 Q6ZN92 141 aa12.15□□□□□ -0.46
PTPN20-203ENST00000374342 UQCR10Q9UDW1 63 aa12.15□□□□□ -0.46
PTPN20-203ENST00000374342 CYSLTR1Q9Y271 337 aa12.15□□□□□ -0.46
PTPN20-203ENST00000374342 TP53TG1Q9Y2A0 90 aa12.15□□□□□ -0.46
PTPN20-203ENST00000374342 PLAC8L1A1L4L8 177 aa12.15□□□□□ -0.46
PTPN20-203ENST00000374342 WFDC9Q8NEX5 89 aa12.15□□□□□ -0.46
PTPN20-203ENST00000374342 OR4C5Q8NGB2 326 aa12.15□□□□□ -0.46
PTPN20-203ENST00000374342 NOTCH3Q9UM47 2321 aa12.15□□□□□ -0.47
PTPN20-203ENST00000374342 I3L3M4 83 aa12.13□□□□□ -0.47
PTPN20-203ENST00000374342 TSHBP01222 138 aa12.13□□□□□ -0.47
PTPN20-203ENST00000374342 IGHV3-53P01767 116 aa12.13□□□□□ -0.47
PTPN20-203ENST00000374342 TNFRSF18Q9Y5U5 241 aa12.13□□□□□ -0.47
PTPN20-203ENST00000374342 G0S2P27469 103 aa12.13□□□□□ -0.47
PTPN20-203ENST00000374342 RIPPLY3P57055 190 aa12.13□□□□□ -0.47
PTPN20-203ENST00000374342 RPL39P62891 51 aaKnown RBP12.13□□□□□ -0.47
PTPN20-203ENST00000374342 DAZ2Q13117 558 aaKnown RBP12.13□□□□□ -0.47
PTPN20-203ENST00000374342 C3orf56Q8N813 242 aa12.13□□□□□ -0.47
PTPN20-203ENST00000374342 NEXN-AS1Q8NBZ9 246 aa12.13□□□□□ -0.47
PTPN20-203ENST00000374342 ZNF479Q96JC4 524 aa12.13□□□□□ -0.47
PTPN20-203ENST00000374342 RHOHQ15669 191 aa12.12□□□□□ -0.47
PTPN20-203ENST00000374342 TP73-AS1Q9UF72 201 aa12.12□□□□□ -0.47
PTPN20-203ENST00000374342 Q9UF83 564 aa12.12□□□□□ -0.47
PTPN20-203ENST00000374342 TRAV4A0A0B4J268 109 aa12.11□□□□□ -0.47
PTPN20-203ENST00000374342 ERASQ7Z444 233 aa12.11□□□□□ -0.47
PTPN20-203ENST00000374342 PRIMA1Q86XR5 153 aa12.11□□□□□ -0.47
PTPN20-203ENST00000374342 HNRNPA3P51991 378 aaKnown RBP12.11□□□□□ -0.47
PTPN20-203ENST00000374342 TCTAP57738 103 aa12.11□□□□□ -0.47
PTPN20-203ENST00000374342 A0A087WX48 190 aa12.1□□□□□ -0.47
PTPN20-203ENST00000374342 GAGE12BA1L429 117 aa12.1□□□□□ -0.47
PTPN20-203ENST00000374342 WIPF1O43516 503 aa12.1□□□□□ -0.47
PTPN20-203ENST00000374342 GAGE7O76087 117 aa12.1□□□□□ -0.47
PTPN20-203ENST00000374342 DPM2O94777 84 aa12.1□□□□□ -0.47
PTPN20-203ENST00000374342 IGKCP01834 107 aa12.1□□□□□ -0.47
PTPN20-203ENST00000374342 GAGE12FP0CL80 117 aa12.1□□□□□ -0.47
PTPN20-203ENST00000374342 GAGE12GP0CL81 117 aa12.1□□□□□ -0.47
PTPN20-203ENST00000374342 GAGE12IP0CL82 117 aa12.1□□□□□ -0.47
PTPN20-203ENST00000374342 EMP1P54849 157 aa12.1□□□□□ -0.47
PTPN20-203ENST00000374342 ANKRD39Q53RE8 183 aa12.1□□□□□ -0.47
PTPN20-203ENST00000374342 BAALCQ8WXS3 180 aa12.1□□□□□ -0.47
PTPN20-203ENST00000374342 MRPL35Q9NZE8 188 aaKnown RBP12.1□□□□□ -0.47
PTPN20-203ENST00000374342 LINC01549A6NIU2 74 aa12.09□□□□□ -0.47
PTPN20-203ENST00000374342 STPG4Q8N801 248 aa12.09□□□□□ -0.47
PTPN20-203ENST00000374342 ZMAT4Q9H898 229 aa12.09□□□□□ -0.47
PTPN20-203ENST00000374342 TRGV2A0A075B6R0 118 aa12.09□□□□□ -0.47
PTPN20-203ENST00000374342 TRAV12-1A0A0B4J245 112 aa12.09□□□□□ -0.47
PTPN20-203ENST00000374342 EREGO14944 169 aa12.09□□□□□ -0.47
PTPN20-203ENST00000374342 C12orf54Q6X4T0 127 aa12.08□□□□□ -0.48
PTPN20-203ENST00000374342 DNAJC30Q96LL9 226 aa12.08□□□□□ -0.48
PTPN20-203ENST00000374342 OVOL2Q9BRP0 275 aa12.08□□□□□ -0.48
PTPN20-203ENST00000374342 K7EQD1 137 aa12.07□□□□□ -0.48
PTPN20-203ENST00000374342 APOC4P55056 127 aa12.07□□□□□ -0.48
PTPN20-203ENST00000374342 CTAG1AP78358 180 aa12.07□□□□□ -0.48
PTPN20-203ENST00000374342 SHISA2Q6UWI4 295 aa12.07□□□□□ -0.48
PTPN20-203ENST00000374342 CHTOPQ9Y3Y2 248 aaKnown RBP12.07□□□□□ -0.48
PTPN20-203ENST00000374342 IGIPA6NJ69 53 aa12.07□□□□□ -0.48
PTPN20-203ENST00000374342 DEFB135Q30KP9 77 aa12.07□□□□□ -0.48
PTPN20-203ENST00000374342 SLC25A34Q6PIV7 304 aa12.07□□□□□ -0.48
PTPN20-203ENST00000374342 PHLDA1Q8WV24 401 aaPredicted RBP12.07□□□□□ -0.48
PTPN20-203ENST00000374342 X6R8D5 127 aa12.07□□□□□ -0.48
PTPN20-203ENST00000374342 FBN1P35555 2871 aaKnown RBP12.06□□□□□ -0.48
PTPN20-203ENST00000374342 IGHV3-38A0A0C4DH36 116 aa12.06□□□□□ -0.48
PTPN20-203ENST00000374342 F8VRH5 84 aa12.06□□□□□ -0.48
PTPN20-203ENST00000374342 C20orf203Q8NBC4 194 aa12.06□□□□□ -0.48
PTPN20-203ENST00000374342 TMEM141Q96I45 108 aa12.06□□□□□ -0.48
PTPN20-203ENST00000374342 TIMM17AQ99595 171 aa12.06□□□□□ -0.48
PTPN20-203ENST00000374342 PLNP26678 52 aa12.05□□□□□ -0.48
PTPN20-203ENST00000374342 KIR2DL5BQ8NHK3 375 aa12.05□□□□□ -0.48
PTPN20-203ENST00000374342 SNHG12Q9BXW3 62 aa12.05□□□□□ -0.48
PTPN20-203ENST00000374342 OXLD1Q5BKU9 147 aa12.05□□□□□ -0.48
PTPN20-203ENST00000374342 PRSS29PA6NIE9 313 aa12.04□□□□□ -0.48
PTPN20-203ENST00000374342 M0R143 59 aa12.04□□□□□ -0.48
PTPN20-203ENST00000374342 COX8AP10176 69 aa12.04□□□□□ -0.48
PTPN20-203ENST00000374342 NMUP48645 174 aa12.04□□□□□ -0.48
PTPN20-203ENST00000374342 ZC2HC1BQ5TFG8 222 aa12.04□□□□□ -0.48
PTPN20-203ENST00000374342 SLC25A29Q8N8R3 303 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms