RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 MED14OSP0DP75 135 aa12.41□□□□□ -0.42
SCAF1-201ENST00000360565 SPAG8Q99932 426 aaPredicted RBP12.41□□□□□ -0.42
SCAF1-201ENST00000360565 A0A0J9YX75 114 aa12.41□□□□□ -0.42
SCAF1-201ENST00000360565 CFC1BP0CG36 223 aa12.41□□□□□ -0.42
SCAF1-201ENST00000360565 CFC1P0CG37 223 aa12.41□□□□□ -0.42
SCAF1-201ENST00000360565 Q71RC1 249 aaPredicted RBP12.41□□□□□ -0.42
SCAF1-201ENST00000360565 E9PLD3 99 aa12.4□□□□□ -0.42
SCAF1-201ENST00000360565 HERVK_113P63121 156 aa12.4□□□□□ -0.42
SCAF1-201ENST00000360565 TMEM61Q8N0U2 210 aa12.4□□□□□ -0.43
SCAF1-201ENST00000360565 H3BMM0 161 aa12.39□□□□□ -0.43
SCAF1-201ENST00000360565 WFDC2Q14508 124 aa12.39□□□□□ -0.43
SCAF1-201ENST00000360565 UBE2WQ96B02 151 aa12.39□□□□□ -0.43
SCAF1-201ENST00000360565 C20orf173Q96LM9 149 aa12.39□□□□□ -0.43
SCAF1-201ENST00000360565 A4D1N5 150 aa12.39□□□□□ -0.43
SCAF1-201ENST00000360565 Q8N6K4 173 aa12.39□□□□□ -0.43
SCAF1-201ENST00000360565 TIMM17AQ99595 171 aa12.38□□□□□ -0.43
SCAF1-201ENST00000360565 OPRPNQ99935 248 aaPredicted RBP12.38□□□□□ -0.43
SCAF1-201ENST00000360565 Q9H8V8 135 aa12.38□□□□□ -0.43
SCAF1-201ENST00000360565 SPANXA1Q9NS26 97 aa12.38□□□□□ -0.43
SCAF1-201ENST00000360565 A0A096LPF7 62 aa12.37□□□□□ -0.43
SCAF1-201ENST00000360565 F5H768 121 aa12.37□□□□□ -0.43
SCAF1-201ENST00000360565 NXPH4O95158 308 aa12.36□□□□□ -0.43
SCAF1-201ENST00000360565 IGHG4P01861 327 aa12.36□□□□□ -0.43
SCAF1-201ENST00000360565 ZFAND2AQ8N6M9 145 aa12.36□□□□□ -0.43
SCAF1-201ENST00000360565 NTN5Q8WTR8 489 aaPredicted RBP12.36□□□□□ -0.43
SCAF1-201ENST00000360565 RNF185Q96GF1 192 aa12.36□□□□□ -0.43
SCAF1-201ENST00000360565 DAD1P61803 113 aa12.35□□□□□ -0.43
SCAF1-201ENST00000360565 MUSTN1Q8IVN3 82 aa12.35□□□□□ -0.43
SCAF1-201ENST00000360565 DPH3Q96FX2 82 aa12.35□□□□□ -0.43
SCAF1-201ENST00000360565 TET2Q6N021 2002 aaPredicted RBP12.35□□□□□ -0.43
SCAF1-201ENST00000360565 IGKV2D-26A0A0A0MRZ7 120 aa12.35□□□□□ -0.43
SCAF1-201ENST00000360565 TMEM89A2RUT3 159 aa12.34□□□□□ -0.43
SCAF1-201ENST00000360565 GAGE2AQ6NT46 116 aa12.34□□□□□ -0.43
SCAF1-201ENST00000360565 C11orf21Q9P2W6 132 aa12.34□□□□□ -0.43
SCAF1-201ENST00000360565 C20orf203Q8NBC4 194 aa12.34□□□□□ -0.43
SCAF1-201ENST00000360565 CARD19Q96LW7 228 aa12.33□□□□□ -0.43
SCAF1-201ENST00000360565 CLPSL2Q6UWE3 100 aa12.33□□□□□ -0.44
SCAF1-201ENST00000360565 U3KQK5 164 aa12.33□□□□□ -0.44
SCAF1-201ENST00000360565 J3QKU1 62 aa12.33□□□□□ -0.44
SCAF1-201ENST00000360565 GAS8-AS1O95177 125 aa12.33□□□□□ -0.44
SCAF1-201ENST00000360565 C10orf99Q6UWK7 81 aa12.33□□□□□ -0.44
SCAF1-201ENST00000360565 RNF152Q8N8N0 203 aa12.33□□□□□ -0.44
SCAF1-201ENST00000360565 PRORYQ9H606 182 aa12.33□□□□□ -0.44
SCAF1-201ENST00000360565 URB1-AS1Q96HZ7 61 aa12.32□□□□□ -0.44
SCAF1-201ENST00000360565 LAMTOR3Q9UHA4 124 aa12.32□□□□□ -0.44
SCAF1-201ENST00000360565 GHRHP01286 108 aa12.31□□□□□ -0.44
SCAF1-201ENST00000360565 OVOL2Q9BRP0 275 aa12.31□□□□□ -0.44
SCAF1-201ENST00000360565 DNAJC30Q96LL9 226 aa12.31□□□□□ -0.44
SCAF1-201ENST00000360565 K7EQG2 157 aa12.31□□□□□ -0.44
SCAF1-201ENST00000360565 CEMP1Q6PRD7 247 aaPredicted RBP12.31□□□□□ -0.44
SCAF1-201ENST00000360565 Q8N976 141 aa12.31□□□□□ -0.44
SCAF1-201ENST00000360565 C5orf38Q86SI9 138 aa12.3□□□□□ -0.44
SCAF1-201ENST00000360565 DAND5Q8N907 189 aa12.3□□□□□ -0.44
SCAF1-201ENST00000360565 COL4A2P08572 1712 aa12.3□□□□□ -0.44
SCAF1-201ENST00000360565 P0DMU3 169 aa12.3□□□□□ -0.44
SCAF1-201ENST00000360565 FAM231AP0DMU4 169 aa12.3□□□□□ -0.44
SCAF1-201ENST00000360565 FAM231CP0DMU5 169 aa12.3□□□□□ -0.44
SCAF1-201ENST00000360565 UNC80Q8N2C7 3258 aa12.29□□□□□ -0.44
SCAF1-201ENST00000360565 DOPEY1Q5JWR5 2465 aa12.29□□□□□ -0.44
SCAF1-201ENST00000360565 ZNF462Q96JM2 2506 aa12.29□□□□□ -0.44
SCAF1-201ENST00000360565 MRPS12O15235 138 aaKnown RBP12.29□□□□□ -0.44
SCAF1-201ENST00000360565 XCL1P47992 114 aa12.29□□□□□ -0.44
SCAF1-201ENST00000360565 ANGP03950 147 aaKnown RBP12.29□□□□□ -0.44
SCAF1-201ENST00000360565 HIST1H4AP62805 103 aaKnown RBP12.29□□□□□ -0.44
SCAF1-201ENST00000360565 PRR9Q5T870 116 aa12.29□□□□□ -0.44
SCAF1-201ENST00000360565 PRSS47A8MTI9 375 aa12.28□□□□□ -0.44
SCAF1-201ENST00000360565 TRBV7-3A0A075B6L6 115 aa12.28□□□□□ -0.44
SCAF1-201ENST00000360565 Q6ZS46 218 aa12.28□□□□□ -0.44
SCAF1-201ENST00000360565 MAPKAPK5-AS1Q8N8E1 139 aa12.28□□□□□ -0.44
SCAF1-201ENST00000360565 A0A0J9YY99 117 aa12.28□□□□□ -0.44
SCAF1-201ENST00000360565 INAFM2P0DMQ5 153 aa12.27□□□□□ -0.44
SCAF1-201ENST00000360565 Q6ZQT7 251 aa12.27□□□□□ -0.44
SCAF1-201ENST00000360565 SLC25A29Q8N8R3 303 aa12.27□□□□□ -0.44
SCAF1-201ENST00000360565 NEXN-AS1Q8NBZ9 246 aa12.27□□□□□ -0.44
SCAF1-201ENST00000360565 CLPSL1A2RUU4 121 aa12.27□□□□□ -0.45
SCAF1-201ENST00000360565 K7EQD1 137 aa12.27□□□□□ -0.45
SCAF1-201ENST00000360565 TRANK1O15050 2925 aa12.26□□□□□ -0.45
SCAF1-201ENST00000360565 A0A1W2PPR1 153 aa12.26□□□□□ -0.45
SCAF1-201ENST00000360565 TRAV13-2A0A0B4J235 113 aa12.26□□□□□ -0.45
SCAF1-201ENST00000360565 IFITM1P13164 125 aa12.26□□□□□ -0.45
SCAF1-201ENST00000360565 C2orf91Q6ZV80 131 aa12.26□□□□□ -0.45
SCAF1-201ENST00000360565 PRUNE2Q8WUY3 3088 aa12.26□□□□□ -0.45
SCAF1-201ENST00000360565 ANKRD29Q8N6D5 301 aa12.25□□□□□ -0.45
SCAF1-201ENST00000360565 NRACQ8N912 160 aa12.25□□□□□ -0.45
SCAF1-201ENST00000360565 IGHV3-30-3P0DP02 117 aa12.25□□□□□ -0.45
SCAF1-201ENST00000360565 MAP6D1Q9H9H5 199 aa12.25□□□□□ -0.45
SCAF1-201ENST00000360565 TEN1Q86WV5 123 aa12.25□□□□□ -0.45
SCAF1-201ENST00000360565 CITED2Q99967 270 aaPredicted RBP12.25□□□□□ -0.45
SCAF1-201ENST00000360565 ADAMTS20P59510 1910 aa12.25□□□□□ -0.45
SCAF1-201ENST00000360565 DAZ2Q13117 558 aaKnown RBP12.25□□□□□ -0.45
SCAF1-201ENST00000360565 DAZ4Q86SG3 579 aaKnown RBP12.25□□□□□ -0.45
SCAF1-201ENST00000360565 DAZ3Q9NR90 486 aaKnown RBP12.25□□□□□ -0.45
SCAF1-201ENST00000360565 FASNP49327 2511 aaKnown RBP12.24□□□□□ -0.45
SCAF1-201ENST00000360565 EPG5Q9HCE0 2579 aa12.24□□□□□ -0.45
SCAF1-201ENST00000360565 F8W735 103 aaPredicted RBP12.24□□□□□ -0.45
SCAF1-201ENST00000360565 C4orf3Q8WVX3 66 aa12.24□□□□□ -0.45
SCAF1-201ENST00000360565 PTH2Q96A98 100 aa12.24□□□□□ -0.45
SCAF1-201ENST00000360565 TM2D2Q9BX73 214 aa12.24□□□□□ -0.45
SCAF1-201ENST00000360565 RNASE3P12724 160 aaKnown RBP12.23□□□□□ -0.45
SCAF1-201ENST00000360565 APOC4P55056 127 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms