RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 MIC13Q5XKP0 118 aa5.87□□□□□ -1.47
ATXN3-201ENST00000340660 TREM1Q9NP99 234 aa5.87□□□□□ -1.47
ATXN3-201ENST00000340660 TXNL4BQ9NX01 149 aaKnown RBP5.87□□□□□ -1.47
ATXN3-201ENST00000340660 IGHV1-24A0A0C4DH33 117 aa5.86□□□□□ -1.47
ATXN3-201ENST00000340660 FNDC10F2Z333 226 aa5.86□□□□□ -1.47
ATXN3-201ENST00000340660 MED6O75586 246 aa5.86□□□□□ -1.47
ATXN3-201ENST00000340660 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
ATXN3-201ENST00000340660 MXD1Q05195 221 aa5.86□□□□□ -1.47
ATXN3-201ENST00000340660 RNASE10Q5GAN6 216 aaKnown RBP5.86□□□□□ -1.47
ATXN3-201ENST00000340660 SFRP2Q96HF1 295 aa5.86□□□□□ -1.47
ATXN3-201ENST00000340660 SLIRPQ9GZT3 109 aaKnown RBP5.86□□□□□ -1.47
ATXN3-201ENST00000340660 CCDC59Q9P031 241 aaKnown RBP5.86□□□□□ -1.47
ATXN3-201ENST00000340660 C14orf166Q9Y224 244 aaKnown RBP5.86□□□□□ -1.47
ATXN3-201ENST00000340660 IGLV4-69A0A075B6H9 119 aa5.85□□□□□ -1.47
ATXN3-201ENST00000340660 PRSS47A8MTI9 375 aa5.85□□□□□ -1.47
ATXN3-201ENST00000340660 CD3DP04234 171 aa5.85□□□□□ -1.47
ATXN3-201ENST00000340660 PRSS2P07478 247 aa5.85□□□□□ -1.47
ATXN3-201ENST00000340660 NBEAP1P0C6P0 100 aa5.85□□□□□ -1.47
ATXN3-201ENST00000340660 SDC2P34741 201 aa5.85□□□□□ -1.47
ATXN3-201ENST00000340660 SCGB2B2Q4G0G5 96 aa5.85□□□□□ -1.47
ATXN3-201ENST00000340660 Q6ZRG5 221 aa5.85□□□□□ -1.47
ATXN3-201ENST00000340660 C12orf45Q8N5I9 185 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-201ENST00000340660 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-201ENST00000340660 OR1L4Q8NGR5 311 aa5.85□□□□□ -1.47
ATXN3-201ENST00000340660 SLC25A2Q9BXI2 301 aa5.85□□□□□ -1.47
ATXN3-201ENST00000340660 CTDSP1Q9GZU7 261 aa5.85□□□□□ -1.47
ATXN3-201ENST00000340660 LGALS3P17931 250 aaKnown RBP5.84□□□□□ -1.47
ATXN3-201ENST00000340660 SPAG11AQ6PDA7 123 aa5.84□□□□□ -1.47
ATXN3-201ENST00000340660 ISOC2Q96AB3 205 aa5.84□□□□□ -1.47
ATXN3-201ENST00000340660 PFDN5Q99471 154 aa5.84□□□□□ -1.47
ATXN3-201ENST00000340660 RABL2AQ9UBK7 228 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-201ENST00000340660 RABL2BQ9UNT1 228 aa5.84□□□□□ -1.47
ATXN3-201ENST00000340660 C3orf22Q8N5N4 141 aa5.83□□□□□ -1.48
ATXN3-201ENST00000340660 FAM167A-AS1Q96KT0 104 aa5.83□□□□□ -1.48
ATXN3-201ENST00000340660 PSG8Q9UQ74 426 aa5.83□□□□□ -1.48
ATXN3-201ENST00000340660 S100A4P26447 101 aaKnown RBP5.82□□□□□ -1.48
ATXN3-201ENST00000340660 RPL28P46779 137 aaKnown RBP5.82□□□□□ -1.48
ATXN3-201ENST00000340660 UBE2NLQ5JXB2 153 aa5.82□□□□□ -1.48
ATXN3-201ENST00000340660 FXYD5Q96DB9 178 aa5.82□□□□□ -1.48
ATXN3-201ENST00000340660 IGKV3D-20A0A0C4DH25 116 aa5.81□□□□□ -1.48
ATXN3-201ENST00000340660 H3BVH4 76 aa5.81□□□□□ -1.48
ATXN3-201ENST00000340660 NUPR1O60356 82 aa5.81□□□□□ -1.48
ATXN3-201ENST00000340660 METTL15P1P0C7V9 234 aa5.81□□□□□ -1.48
ATXN3-201ENST00000340660 XCL1P47992 114 aa5.81□□□□□ -1.48
ATXN3-201ENST00000340660 CAMLGP49069 296 aa5.81□□□□□ -1.48
ATXN3-201ENST00000340660 RANP62826 216 aaKnown RBP5.81□□□□□ -1.48
ATXN3-201ENST00000340660 ARL16Q0P5N6 197 aa5.81□□□□□ -1.48
ATXN3-201ENST00000340660 SNX29P2Q8IUI4 249 aa5.81□□□□□ -1.48
ATXN3-201ENST00000340660 IL36BQ9NZH7 164 aa5.81□□□□□ -1.48
ATXN3-201ENST00000340660 C19orf71A6NCJ1 209 aa5.8□□□□□ -1.48
ATXN3-201ENST00000340660 ZFP1Q6P2D0 407 aa5.8□□□□□ -1.48
ATXN3-201ENST00000340660 CAMK2N2Q96S95 79 aa5.8□□□□□ -1.48
ATXN3-201ENST00000340660 TMEM243Q9BU79 118 aa5.8□□□□□ -1.48
ATXN3-201ENST00000340660 PSENENQ9NZ42 101 aa5.8□□□□□ -1.48
ATXN3-201ENST00000340660 OR5AC2Q9NZP5 309 aa5.8□□□□□ -1.48
ATXN3-201ENST00000340660 GPR132Q9UNW8 380 aa5.8□□□□□ -1.48
ATXN3-201ENST00000340660 FLVCR2Q9UPI3 526 aa5.8□□□□□ -1.48
ATXN3-201ENST00000340660 GCGP01275 180 aa5.79□□□□□ -1.48
ATXN3-201ENST00000340660 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
ATXN3-201ENST00000340660 RAB4BP61018 213 aa5.79□□□□□ -1.48
ATXN3-201ENST00000340660 Q6Q795 121 aa5.79□□□□□ -1.48
ATXN3-201ENST00000340660 TMEM14EPQ6UXP3 125 aa5.79□□□□□ -1.48
ATXN3-201ENST00000340660 NRARPQ7Z6K4 114 aa5.79□□□□□ -1.48
ATXN3-201ENST00000340660 OR11H4Q8NGC9 324 aa5.79□□□□□ -1.48
ATXN3-201ENST00000340660 OR5A1Q8NGJ0 315 aa5.79□□□□□ -1.48
ATXN3-201ENST00000340660 DYNC2LI1Q8TCX1 351 aa5.79□□□□□ -1.48
ATXN3-201ENST00000340660 NMES1Q9C002 83 aa5.79□□□□□ -1.48
ATXN3-201ENST00000340660 SCN3BQ9NY72 215 aa5.79□□□□□ -1.48
ATXN3-201ENST00000340660 SLC25A6P12236 298 aa5.78□□□□□ -1.48
ATXN3-201ENST00000340660 TAS2R19P59542 299 aa5.78□□□□□ -1.48
ATXN3-201ENST00000340660 GCSAMLQ5JQS6 135 aa5.78□□□□□ -1.48
ATXN3-201ENST00000340660 GOLT1AQ6ZVE7 132 aa5.78□□□□□ -1.48
ATXN3-201ENST00000340660 SAMD12Q8N8I0 201 aa5.78□□□□□ -1.48
ATXN3-201ENST00000340660 SGK494Q96LW2 274 aa5.78□□□□□ -1.48
ATXN3-201ENST00000340660 HYLS1Q96M11 299 aa5.78□□□□□ -1.48
ATXN3-201ENST00000340660 KCNIP3Q9Y2W7 256 aa5.78□□□□□ -1.48
ATXN3-201ENST00000340660 ZNF56Q15929 161 aa5.77□□□□□ -1.49
ATXN3-201ENST00000340660 FAAP20Q6NZ36 180 aa5.77□□□□□ -1.49
ATXN3-201ENST00000340660 MIR17HGQ75NE6 70 aa5.77□□□□□ -1.49
ATXN3-201ENST00000340660 NDUFA12Q9UI09 145 aa5.77□□□□□ -1.49
ATXN3-201ENST00000340660 M0R381 172 aa5.76□□□□□ -1.49
ATXN3-201ENST00000340660 BCL2L11O43521 198 aa5.76□□□□□ -1.49
ATXN3-201ENST00000340660 ARMS2P0C7Q2 107 aa5.76□□□□□ -1.49
ATXN3-201ENST00000340660 GNGT1P63211 74 aa5.76□□□□□ -1.49
ATXN3-201ENST00000340660 CCL25O15444 150 aa5.75□□□□□ -1.49
ATXN3-201ENST00000340660 BCE1O60756 84 aa5.75□□□□□ -1.49
ATXN3-201ENST00000340660 CIB2O75838 187 aa5.75□□□□□ -1.49
ATXN3-201ENST00000340660 ESDP10768 282 aa5.75□□□□□ -1.49
ATXN3-201ENST00000340660 MED28Q9H204 178 aa5.75□□□□□ -1.49
ATXN3-201ENST00000340660 RAB3DO95716 219 aa5.74□□□□□ -1.49
ATXN3-201ENST00000340660 RPL29P47914 159 aaKnown RBP5.74□□□□□ -1.49
ATXN3-201ENST00000340660 GABARAPL2P60520 117 aa5.74□□□□□ -1.49
ATXN3-201ENST00000340660 OR2D3Q8NGH3 330 aa5.74□□□□□ -1.49
ATXN3-201ENST00000340660 UBE2L6O14933 153 aa5.73□□□□□ -1.49
ATXN3-201ENST00000340660 SSSCA1O60232 199 aa5.73□□□□□ -1.49
ATXN3-201ENST00000340660 FGF7P21781 194 aa5.73□□□□□ -1.49
ATXN3-201ENST00000340660 GAGE2EQ4V326 116 aa5.73□□□□□ -1.49
ATXN3-201ENST00000340660 OR5C1Q8NGR4 320 aa5.73□□□□□ -1.49
ATXN3-201ENST00000340660 PGLYRP4Q96LB8 373 aa5.73□□□□□ -1.49
ATXN3-201ENST00000340660 C2orf48Q96LS8 159 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms