RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 NAV2Q8IVL1 2488 aa12.05□□□□□ -0.48
SCARB1-202ENST00000339570 CARD19Q96LW7 228 aa12.04□□□□□ -0.48
SCARB1-202ENST00000339570 PRSS47A8MTI9 375 aa12.04□□□□□ -0.48
SCARB1-202ENST00000339570 SOCS3O14543 225 aa12.04□□□□□ -0.48
SCARB1-202ENST00000339570 VCYO14598 125 aa12.04□□□□□ -0.48
SCARB1-202ENST00000339570 ZNF876PQ49A33 203 aa12.04□□□□□ -0.48
SCARB1-202ENST00000339570 PRRC2AP48634 2157 aaKnown RBP12.04□□□□□ -0.48
SCARB1-202ENST00000339570 Q6ZSV7 163 aa12.04□□□□□ -0.48
SCARB1-202ENST00000339570 Q8N1Y9 231 aa12.04□□□□□ -0.48
SCARB1-202ENST00000339570 DAZ1Q9NQZ3 744 aaKnown RBP12.04□□□□□ -0.48
SCARB1-202ENST00000339570 LINC00315P59091 139 aa12.03□□□□□ -0.48
SCARB1-202ENST00000339570 CDIP1Q9H305 208 aa12.03□□□□□ -0.48
SCARB1-202ENST00000339570 MXRA5Q9NR99 2828 aa12.03□□□□□ -0.48
SCARB1-202ENST00000339570 TRAV8-3A0A0A6YYJ7 113 aa12.03□□□□□ -0.48
SCARB1-202ENST00000339570 IGIPA6NJ69 53 aa12.03□□□□□ -0.48
SCARB1-202ENST00000339570 A8MWV9 139 aa12.03□□□□□ -0.48
SCARB1-202ENST00000339570 UBE2D1P51668 147 aa12.03□□□□□ -0.48
SCARB1-202ENST00000339570 Q9UF83 564 aa12.03□□□□□ -0.48
SCARB1-202ENST00000339570 MUSTN1Q8IVN3 82 aa12.02□□□□□ -0.49
SCARB1-202ENST00000339570 PRO1854Q9UHT4 67 aa12.02□□□□□ -0.49
SCARB1-202ENST00000339570 IGHV3-30P01768 117 aa12.01□□□□□ -0.49
SCARB1-202ENST00000339570 ELANEP08246 267 aa12.01□□□□□ -0.49
SCARB1-202ENST00000339570 IGHV3-30-5P0DP03 117 aa12.01□□□□□ -0.49
SCARB1-202ENST00000339570 DAND5Q8N907 189 aa12.01□□□□□ -0.49
SCARB1-202ENST00000339570 ANKRD17O75179 2603 aaKnown RBP12.01□□□□□ -0.49
SCARB1-202ENST00000339570 IGHV3-38A0A0C4DH36 116 aa12.01□□□□□ -0.49
SCARB1-202ENST00000339570 SYNJ2BPP57105 145 aa12.01□□□□□ -0.49
SCARB1-202ENST00000339570 LENEPQ9Y5L5 61 aa12.01□□□□□ -0.49
SCARB1-202ENST00000339570 KIF25-AS1Q9Y6Z4 181 aa12.01□□□□□ -0.49
SCARB1-202ENST00000339570 CHD6Q8TD26 2715 aa12□□□□□ -0.49
SCARB1-202ENST00000339570 GNLYP22749 145 aa12□□□□□ -0.49
SCARB1-202ENST00000339570 GATA3P23771 443 aa12□□□□□ -0.49
SCARB1-202ENST00000339570 POLR2KP53803 58 aaKnown RBP12□□□□□ -0.49
SCARB1-202ENST00000339570 DUX3Q96PT4 197 aa12□□□□□ -0.49
SCARB1-202ENST00000339570 Q6ZUT4 128 aa12□□□□□ -0.49
SCARB1-202ENST00000339570 C10orf126Q8N4M7 172 aa12□□□□□ -0.49
SCARB1-202ENST00000339570 NIPBLQ6KC79 2804 aaeCLIP12□□□□□ -0.49
SCARB1-202ENST00000339570 NF1P21359 2839 aa12□□□□□ -0.49
SCARB1-202ENST00000339570 VCX2Q9H322 139 aa11.99□□□□□ -0.49
SCARB1-202ENST00000339570 ID1P41134 155 aa11.99□□□□□ -0.49
SCARB1-202ENST00000339570 IGHV3-16A0A0C4DH30 117 aa11.99□□□□□ -0.49
SCARB1-202ENST00000339570 SLC25A20O43772 301 aa11.98□□□□□ -0.49
SCARB1-202ENST00000339570 CRYBA4P53673 196 aa11.98□□□□□ -0.49
SCARB1-202ENST00000339570 ATP5J2P56134 94 aa11.98□□□□□ -0.49
SCARB1-202ENST00000339570 AVPP01185 164 aa11.98□□□□□ -0.49
SCARB1-202ENST00000339570 TEN1Q86WV5 123 aa11.98□□□□□ -0.49
SCARB1-202ENST00000339570 NTN5Q8WTR8 489 aaPredicted RBP11.98□□□□□ -0.49
SCARB1-202ENST00000339570 PPDPFLQ8WWR9 84 aa11.98□□□□□ -0.49
SCARB1-202ENST00000339570 ZNF625Q96I27 306 aaPredicted RBP11.98□□□□□ -0.49
SCARB1-202ENST00000339570 ERG28Q9UKR5 140 aa11.98□□□□□ -0.49
SCARB1-202ENST00000339570 IGHV4-30-2A0A087WSY4 118 aa11.98□□□□□ -0.49
SCARB1-202ENST00000339570 DEFB136Q30KP8 78 aa11.98□□□□□ -0.49
SCARB1-202ENST00000339570 SLC25A29Q8N8R3 303 aa11.98□□□□□ -0.49
SCARB1-202ENST00000339570 PPP1R17O96001 155 aa11.97□□□□□ -0.49
SCARB1-202ENST00000339570 CD28P10747 220 aa11.97□□□□□ -0.49
SCARB1-202ENST00000339570 IGHV4-59P01825 116 aa11.97□□□□□ -0.49
SCARB1-202ENST00000339570 NBL1P41271 181 aa11.97□□□□□ -0.49
SCARB1-202ENST00000339570 UBE2D3P61077 147 aa11.97□□□□□ -0.49
SCARB1-202ENST00000339570 UBE2D2P62837 147 aa11.97□□□□□ -0.49
SCARB1-202ENST00000339570 KHDC1LQ5JSQ8 128 aa11.97□□□□□ -0.49
SCARB1-202ENST00000339570 RNF183Q96D59 192 aa11.97□□□□□ -0.49
SCARB1-202ENST00000339570 TRBV20-1A0A075B6N2 111 aa11.96□□□□□ -0.49
SCARB1-202ENST00000339570 EIF4EBP3O60516 100 aaPredicted RBP11.96□□□□□ -0.49
SCARB1-202ENST00000339570 TEX15Q9BXT5 2789 aa11.96□□□□□ -0.49
SCARB1-202ENST00000339570 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.95□□□□□ -0.5
SCARB1-202ENST00000339570 IGHV3OR16-12A0A075B7B8 117 aa11.95□□□□□ -0.5
SCARB1-202ENST00000339570 IGKV2-29A2NJV5 120 aaPredicted RBP11.95□□□□□ -0.5
SCARB1-202ENST00000339570 M0QY20 66 aa11.95□□□□□ -0.5
SCARB1-202ENST00000339570 LYRM7Q5U5X0 104 aa11.95□□□□□ -0.5
SCARB1-202ENST00000339570 DCANP1Q8TF63 244 aa11.95□□□□□ -0.5
SCARB1-202ENST00000339570 TEX49A0A1B0GTD5 131 aa11.94□□□□□ -0.5
SCARB1-202ENST00000339570 KLLNB2CW77 178 aa11.94□□□□□ -0.5
SCARB1-202ENST00000339570 IGHG2P01859 326 aa11.94□□□□□ -0.5
SCARB1-202ENST00000339570 USMG5Q96IX5 58 aa11.94□□□□□ -0.5
SCARB1-202ENST00000339570 FN1P02751 2386 aaKnown RBP11.94□□□□□ -0.5
SCARB1-202ENST00000339570 ZNF22P17026 224 aaPredicted RBP11.94□□□□□ -0.5
SCARB1-202ENST00000339570 PAPPA-AS1Q5QFB9 102 aa11.94□□□□□ -0.5
SCARB1-202ENST00000339570 CCL19Q99731 98 aa11.94□□□□□ -0.5
SCARB1-202ENST00000339570 TMEM141Q96I45 108 aa11.94□□□□□ -0.5
SCARB1-202ENST00000339570 SNRPD3P62318 126 aaKnown RBP11.93□□□□□ -0.5
SCARB1-202ENST00000339570 ANAPC13Q9BS18 74 aa11.93□□□□□ -0.5
SCARB1-202ENST00000339570 PIMREGQ9BSJ6 248 aa11.93□□□□□ -0.5
SCARB1-202ENST00000339570 SCGB1A1P11684 91 aa11.93□□□□□ -0.5
SCARB1-202ENST00000339570 FAM19A4Q96LR4 140 aa11.93□□□□□ -0.5
SCARB1-202ENST00000339570 IGHV1OR15-1A0A075B7D0 117 aa11.93□□□□□ -0.5
SCARB1-202ENST00000339570 RHODO00212 210 aa11.93□□□□□ -0.5
SCARB1-202ENST00000339570 C19orf54Q5BKX5 351 aa11.93□□□□□ -0.5
SCARB1-202ENST00000339570 CLEC2BQ92478 149 aa11.92□□□□□ -0.5
SCARB1-202ENST00000339570 IGHV3-33P01772 117 aa11.92□□□□□ -0.5
SCARB1-202ENST00000339570 AMELXQ99217 191 aa11.92□□□□□ -0.5
SCARB1-202ENST00000339570 TIMM17AQ99595 171 aa11.92□□□□□ -0.5
SCARB1-202ENST00000339570 IGHV4OR15-8A0A075B7B6 117 aa11.91□□□□□ -0.5
SCARB1-202ENST00000339570 A0A087WW49 117 aa11.91□□□□□ -0.5
SCARB1-202ENST00000339570 SS18L2Q9UHA2 77 aa11.91□□□□□ -0.5
SCARB1-202ENST00000339570 IGLV4-3A0A075B6K6 122 aa11.91□□□□□ -0.5
SCARB1-202ENST00000339570 TRBV27A0A0K0K1C4 114 aa11.91□□□□□ -0.5
SCARB1-202ENST00000339570 TIMM21Q9BVV7 248 aa11.91□□□□□ -0.5
SCARB1-202ENST00000339570 TMEM223A0PJW6 202 aa11.91□□□□□ -0.5
SCARB1-202ENST00000339570 LINC01619G3V211 115 aa11.91□□□□□ -0.5
SCARB1-202ENST00000339570 IGHV3-30-3P0DP02 117 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms