RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 GAGE12JA6NER3 117 aa10.52□□□□□ -0.73
CMC1-201ENST00000334841 COLCA2A8K830 154 aa10.52□□□□□ -0.73
CMC1-201ENST00000334841 MT-ND6P03923 174 aa10.52□□□□□ -0.73
CMC1-201ENST00000334841 RPS10P46783 165 aaKnown RBP10.52□□□□□ -0.73
CMC1-201ENST00000334841 GAGE1Q13065 139 aa10.52□□□□□ -0.73
CMC1-201ENST00000334841 GAGE4Q13068 117 aa10.52□□□□□ -0.73
CMC1-201ENST00000334841 GAGE5Q13069 117 aa10.52□□□□□ -0.73
CMC1-201ENST00000334841 GAGE13Q4V321 117 aa10.52□□□□□ -0.73
CMC1-201ENST00000334841 FRZBQ92765 325 aa10.52□□□□□ -0.73
CMC1-201ENST00000334841 KLK5Q9Y337 293 aaPredicted RBP10.52□□□□□ -0.73
CMC1-201ENST00000334841 ICOSQ9Y6W8 199 aa10.52□□□□□ -0.73
CMC1-201ENST00000334841 STARD9Q9P2P6 4700 aa10.51□□□□□ -0.73
CMC1-201ENST00000334841 D6R8Y8 96 aa10.51□□□□□ -0.73
CMC1-201ENST00000334841 NUDT3O95989 172 aa10.51□□□□□ -0.73
CMC1-201ENST00000334841 NRACQ8N912 160 aa10.51□□□□□ -0.73
CMC1-201ENST00000334841 C15orf53Q8NAA6 179 aa10.51□□□□□ -0.73
CMC1-201ENST00000334841 MRPL18Q9H0U6 180 aaKnown RBP10.51□□□□□ -0.73
CMC1-201ENST00000334841 APLNQ9ULZ1 77 aa10.51□□□□□ -0.73
CMC1-201ENST00000334841 C3orf84H3BNL1 204 aa10.5□□□□□ -0.73
CMC1-201ENST00000334841 APCSP02743 223 aa10.5□□□□□ -0.73
CMC1-201ENST00000334841 CASC10Q5T4H9 136 aa10.5□□□□□ -0.73
CMC1-201ENST00000334841 ZNRF2Q8NHG8 242 aa10.5□□□□□ -0.73
CMC1-201ENST00000334841 NIT2Q9NQR4 276 aa10.5□□□□□ -0.73
CMC1-201ENST00000334841 TRBV7-3A0A075B6L6 115 aa10.49□□□□□ -0.73
CMC1-201ENST00000334841 SRIP30626 198 aa10.49□□□□□ -0.73
CMC1-201ENST00000334841 CKS2P33552 79 aa10.49□□□□□ -0.73
CMC1-201ENST00000334841 UBE2D3P61077 147 aa10.49□□□□□ -0.73
CMC1-201ENST00000334841 UBE2D2P62837 147 aa10.49□□□□□ -0.73
CMC1-201ENST00000334841 RPL36AP83881 106 aaKnown RBP10.49□□□□□ -0.73
CMC1-201ENST00000334841 MRPL23Q16540 153 aaKnown RBP10.49□□□□□ -0.73
CMC1-201ENST00000334841 KIAA1644Q3SXP7 199 aa10.49□□□□□ -0.73
CMC1-201ENST00000334841 OR10J3Q5JRS4 329 aa10.49□□□□□ -0.73
CMC1-201ENST00000334841 ORMDL3Q8N138 153 aa10.49□□□□□ -0.73
CMC1-201ENST00000334841 RPL36ALQ969Q0 106 aaKnown RBP10.49□□□□□ -0.73
CMC1-201ENST00000334841 DNAJC30Q96LL9 226 aa10.49□□□□□ -0.73
CMC1-201ENST00000334841 TRBV6-5A0A0K0K1A5 114 aa10.48□□□□□ -0.73
CMC1-201ENST00000334841 NPYP01303 97 aa10.48□□□□□ -0.73
CMC1-201ENST00000334841 PPBPP02775 128 aa10.48□□□□□ -0.73
CMC1-201ENST00000334841 RAB5AP20339 215 aa10.48□□□□□ -0.73
CMC1-201ENST00000334841 TRAPPC1Q9Y5R8 145 aa10.48□□□□□ -0.73
CMC1-201ENST00000334841 TNFRSF6BO95407 300 aa10.47□□□□□ -0.73
CMC1-201ENST00000334841 FABP9Q0Z7S8 132 aa10.47□□□□□ -0.73
CMC1-201ENST00000334841 PRELID3AQ96N28 172 aa10.47□□□□□ -0.73
CMC1-201ENST00000334841 TNFRSF18Q9Y5U5 241 aa10.47□□□□□ -0.73
CMC1-201ENST00000334841 IGHV3-38A0A0C4DH36 116 aa10.46□□□□□ -0.73
CMC1-201ENST00000334841 TCTAP57738 103 aa10.46□□□□□ -0.73
CMC1-201ENST00000334841 NEGR1Q7Z3B1 354 aa10.46□□□□□ -0.73
CMC1-201ENST00000334841 SDHAF1A6NFY7 115 aa10.45□□□□□ -0.74
CMC1-201ENST00000334841 PPP1R17O96001 155 aa10.45□□□□□ -0.74
CMC1-201ENST00000334841 ATP6V0E2Q8NHE4 81 aa10.45□□□□□ -0.74
CMC1-201ENST00000334841 TMEM70Q9BUB7 260 aa10.45□□□□□ -0.74
CMC1-201ENST00000334841 ST20Q9HBF5 79 aa10.45□□□□□ -0.74
CMC1-201ENST00000334841 PHOX2AO14813 284 aa10.44□□□□□ -0.74
CMC1-201ENST00000334841 SUMO2P61956 95 aaKnown RBP10.44□□□□□ -0.74
CMC1-201ENST00000334841 SH2D6Q7Z4S9 175 aa10.44□□□□□ -0.74
CMC1-201ENST00000334841 ALKBH7Q9BT30 221 aaPredicted RBP10.44□□□□□ -0.74
CMC1-201ENST00000334841 LAMTOR2Q9Y2Q5 125 aa10.44□□□□□ -0.74
CMC1-201ENST00000334841 TRGC2P03986 189 aa10.43□□□□□ -0.74
CMC1-201ENST00000334841 POLR2KP53803 58 aaKnown RBP10.43□□□□□ -0.74
CMC1-201ENST00000334841 ESRGQ1W209 222 aa10.43□□□□□ -0.74
CMC1-201ENST00000334841 LYPD5Q6UWN5 251 aa10.43□□□□□ -0.74
CMC1-201ENST00000334841 DAZ4Q86SG3 579 aaKnown RBP10.43□□□□□ -0.74
CMC1-201ENST00000334841 DEFB104AQ8WTQ1 72 aa10.43□□□□□ -0.74
CMC1-201ENST00000334841 C20orf78Q9BR46 151 aa10.43□□□□□ -0.74
CMC1-201ENST00000334841 DAZ3Q9NR90 486 aaKnown RBP10.43□□□□□ -0.74
CMC1-201ENST00000334841 PLECQ15149 4684 aaKnown RBP10.42□□□□□ -0.74
CMC1-201ENST00000334841 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.42□□□□□ -0.74
CMC1-201ENST00000334841 SMIM2Q9BVW6 85 aa10.42□□□□□ -0.74
CMC1-201ENST00000334841 GTSF1LQ9H1H1 148 aa10.42□□□□□ -0.74
CMC1-201ENST00000334841 TRBV27A0A0K0K1C4 114 aa10.41□□□□□ -0.74
CMC1-201ENST00000334841 TIRAPP58753 221 aa10.41□□□□□ -0.74
CMC1-201ENST00000334841 RPL32P62910 135 aaKnown RBP10.41□□□□□ -0.74
CMC1-201ENST00000334841 NTM-AS1Q6ZSK4 140 aa10.41□□□□□ -0.74
CMC1-201ENST00000334841 MAP1LC3AQ9H492 121 aa10.41□□□□□ -0.74
CMC1-201ENST00000334841 LINC00588Q9Y4M8 146 aa10.41□□□□□ -0.74
CMC1-201ENST00000334841 PRSS47A8MTI9 375 aa10.4□□□□□ -0.74
CMC1-201ENST00000334841 I3L3M4 83 aa10.4□□□□□ -0.74
CMC1-201ENST00000334841 TSHBP01222 138 aa10.4□□□□□ -0.74
CMC1-201ENST00000334841 IGLV2-18A0A075B6J9 118 aa10.39□□□□□ -0.75
CMC1-201ENST00000334841 LOC389332A0A1B0GUA5 103 aa10.39□□□□□ -0.75
CMC1-201ENST00000334841 CCL18P55774 89 aa10.39□□□□□ -0.75
CMC1-201ENST00000334841 IQCJQ1A5X6 159 aa10.39□□□□□ -0.75
CMC1-201ENST00000334841 MRPS16Q9Y3D3 137 aaKnown RBP10.39□□□□□ -0.75
CMC1-201ENST00000334841 TRBV6-8A0A0A6YYG3 113 aa10.38□□□□□ -0.75
CMC1-201ENST00000334841 VCYO14598 125 aa10.38□□□□□ -0.75
CMC1-201ENST00000334841 PMCHP20382 165 aa10.38□□□□□ -0.75
CMC1-201ENST00000334841 COTL1Q14019 142 aa10.38□□□□□ -0.75
CMC1-201ENST00000334841 LELP1Q5T871 98 aa10.38□□□□□ -0.75
CMC1-201ENST00000334841 C18orf32Q8TCD1 76 aa10.38□□□□□ -0.75
CMC1-201ENST00000334841 TMEM97Q5BJF2 176 aa10.37□□□□□ -0.75
CMC1-201ENST00000334841 TENM2Q9NT68 2774 aa10.37□□□□□ -0.75
CMC1-201ENST00000334841 IFI27P40305 119 aaPredicted RBP10.36□□□□□ -0.75
CMC1-201ENST00000334841 AMTP48728 403 aa10.36□□□□□ -0.75
CMC1-201ENST00000334841 WFDC10BQ8IUB3 73 aa10.36□□□□□ -0.75
CMC1-201ENST00000334841 UBE2DNLQ8IWF7 75 aa10.36□□□□□ -0.75
CMC1-201ENST00000334841 Q8N8P6 123 aa10.36□□□□□ -0.75
CMC1-201ENST00000334841 KIR2DL4Q99706 377 aa10.36□□□□□ -0.75
CMC1-201ENST00000334841 UPK3BQ9BT76 320 aa10.36□□□□□ -0.75
CMC1-201ENST00000334841 ALMS1Q8TCU4 4167 aa10.35□□□□□ -0.75
CMC1-201ENST00000334841 TRBV25-1A0A075B6N4 114 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms