RNA–Protein interactions for RNA: ENST00000317419.7

RABGAP1-201, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 2,186 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-201ENST00000317419 GYPEP15421 78 aa13.15□□□□□ -0.3
RABGAP1-201ENST00000317419 NEXN-AS1Q8NBZ9 246 aa13.15□□□□□ -0.3
RABGAP1-201ENST00000317419 COLCA2A8K830 154 aa13.15□□□□□ -0.3
RABGAP1-201ENST00000317419 GAS8-AS1O95177 125 aa13.15□□□□□ -0.3
RABGAP1-201ENST00000317419 DNAJC30Q96LL9 226 aa13.15□□□□□ -0.3
RABGAP1-201ENST00000317419 MT-ND6P03923 174 aa13.14□□□□□ -0.31
RABGAP1-201ENST00000317419 PLECQ15149 4684 aaKnown RBP13.14□□□□□ -0.31
RABGAP1-201ENST00000317419 NIT2Q9NQR4 276 aa13.14□□□□□ -0.31
RABGAP1-201ENST00000317419 ICOSQ9Y6W8 199 aa13.14□□□□□ -0.31
RABGAP1-201ENST00000317419 TRBV6-5A0A0K0K1A5 114 aa13.13□□□□□ -0.31
RABGAP1-201ENST00000317419 MRPL23Q16540 153 aaKnown RBP13.13□□□□□ -0.31
RABGAP1-201ENST00000317419 CASC10Q5T4H9 136 aa13.13□□□□□ -0.31
RABGAP1-201ENST00000317419 NRACQ8N912 160 aa13.13□□□□□ -0.31
RABGAP1-201ENST00000317419 PPBPP02775 128 aa13.13□□□□□ -0.31
RABGAP1-201ENST00000317419 TRBV7-3A0A075B6L6 115 aa13.12□□□□□ -0.31
RABGAP1-201ENST00000317419 SMKR1H3BMG3 65 aa13.11□□□□□ -0.31
RABGAP1-201ENST00000317419 UBE2D3P61077 147 aa13.11□□□□□ -0.31
RABGAP1-201ENST00000317419 UBE2D2P62837 147 aa13.11□□□□□ -0.31
RABGAP1-201ENST00000317419 RPL36AP83881 106 aaKnown RBP13.11□□□□□ -0.31
RABGAP1-201ENST00000317419 RPL36ALQ969Q0 106 aaKnown RBP13.11□□□□□ -0.31
RABGAP1-201ENST00000317419 RPL39LQ96EH5 51 aaKnown RBP13.11□□□□□ -0.31
RABGAP1-201ENST00000317419 GAGE12JA6NER3 117 aa13.11□□□□□ -0.31
RABGAP1-201ENST00000317419 APCSP02743 223 aa13.11□□□□□ -0.31
RABGAP1-201ENST00000317419 RPS10P46783 165 aaKnown RBP13.11□□□□□ -0.31
RABGAP1-201ENST00000317419 GAGE1Q13065 139 aa13.11□□□□□ -0.31
RABGAP1-201ENST00000317419 GAGE4Q13068 117 aa13.11□□□□□ -0.31
RABGAP1-201ENST00000317419 GAGE5Q13069 117 aa13.11□□□□□ -0.31
RABGAP1-201ENST00000317419 GAGE13Q4V321 117 aa13.11□□□□□ -0.31
RABGAP1-201ENST00000317419 SH2D6Q7Z4S9 175 aa13.11□□□□□ -0.31
RABGAP1-201ENST00000317419 ZNRF2Q8NHG8 242 aa13.11□□□□□ -0.31
RABGAP1-201ENST00000317419 D6R8Y8 96 aa13.1□□□□□ -0.31
RABGAP1-201ENST00000317419 NCR2O95944 276 aa13.1□□□□□ -0.31
RABGAP1-201ENST00000317419 PPP1R17O96001 155 aa13.1□□□□□ -0.31
RABGAP1-201ENST00000317419 CKS2P33552 79 aa13.1□□□□□ -0.31
RABGAP1-201ENST00000317419 MRPL18Q9H0U6 180 aaKnown RBP13.1□□□□□ -0.31
RABGAP1-201ENST00000317419 NUDT3O95989 172 aa13.1□□□□□ -0.31
RABGAP1-201ENST00000317419 ORMDL3Q8N138 153 aa13.1□□□□□ -0.31
RABGAP1-201ENST00000317419 PHOX2AO14813 284 aa13.09□□□□□ -0.31
RABGAP1-201ENST00000317419 SRIP30626 198 aa13.09□□□□□ -0.31
RABGAP1-201ENST00000317419 OR10J3Q5JRS4 329 aa13.08□□□□□ -0.31
RABGAP1-201ENST00000317419 TRAPPC1Q9Y5R8 145 aa13.08□□□□□ -0.31
RABGAP1-201ENST00000317419 TNFRSF18Q9Y5U5 241 aa13.08□□□□□ -0.31
RABGAP1-201ENST00000317419 TIRAPP58753 221 aa13.08□□□□□ -0.32
RABGAP1-201ENST00000317419 NEGR1Q7Z3B1 354 aa13.08□□□□□ -0.32
RABGAP1-201ENST00000317419 LAMTOR2Q9Y2Q5 125 aa13.08□□□□□ -0.32
RABGAP1-201ENST00000317419 ATP6V0E2Q8NHE4 81 aa13.07□□□□□ -0.32
RABGAP1-201ENST00000317419 PRSS47A8MTI9 375 aa13.07□□□□□ -0.32
RABGAP1-201ENST00000317419 TNFRSF6BO95407 300 aa13.07□□□□□ -0.32
RABGAP1-201ENST00000317419 RAB5AP20339 215 aa13.07□□□□□ -0.32
RABGAP1-201ENST00000317419 POLR2KP53803 58 aaKnown RBP13.07□□□□□ -0.32
RABGAP1-201ENST00000317419 RPL32P62910 135 aaKnown RBP13.07□□□□□ -0.32
RABGAP1-201ENST00000317419 PRELID3AQ96N28 172 aa13.07□□□□□ -0.32
RABGAP1-201ENST00000317419 NPYP01303 97 aa13.06□□□□□ -0.32
RABGAP1-201ENST00000317419 DAZ4Q86SG3 579 aaKnown RBP13.06□□□□□ -0.32
RABGAP1-201ENST00000317419 C20orf78Q9BR46 151 aa13.06□□□□□ -0.32
RABGAP1-201ENST00000317419 DAZ3Q9NR90 486 aaKnown RBP13.06□□□□□ -0.32
RABGAP1-201ENST00000317419 FABP9Q0Z7S8 132 aa13.05□□□□□ -0.32
RABGAP1-201ENST00000317419 KIAA1644Q3SXP7 199 aa13.05□□□□□ -0.32
RABGAP1-201ENST00000317419 LYPD5Q6UWN5 251 aa13.05□□□□□ -0.32
RABGAP1-201ENST00000317419 ST20Q9HBF5 79 aa13.05□□□□□ -0.32
RABGAP1-201ENST00000317419 ALKBH7Q9BT30 221 aaPredicted RBP13.05□□□□□ -0.32
RABGAP1-201ENST00000317419 TMEM70Q9BUB7 260 aa13.05□□□□□ -0.32
RABGAP1-201ENST00000317419 SDHAF1A6NFY7 115 aa13.04□□□□□ -0.32
RABGAP1-201ENST00000317419 SUMO2P61956 95 aaKnown RBP13.04□□□□□ -0.32
RABGAP1-201ENST00000317419 ESRGQ1W209 222 aa13.04□□□□□ -0.32
RABGAP1-201ENST00000317419 GTSF1LQ9H1H1 148 aa13.04□□□□□ -0.32
RABGAP1-201ENST00000317419 TRBV27A0A0K0K1C4 114 aa13.03□□□□□ -0.32
RABGAP1-201ENST00000317419 VPS13DQ5THJ4 4388 aa13.02□□□□□ -0.33
RABGAP1-201ENST00000317419 IGHV3-38A0A0C4DH36 116 aa13.01□□□□□ -0.33
RABGAP1-201ENST00000317419 TENM2Q9NT68 2774 aa13□□□□□ -0.33
RABGAP1-201ENST00000317419 ALMS1Q8TCU4 4167 aa13□□□□□ -0.33
RABGAP1-201ENST00000317419 IGLV2-18A0A075B6J9 118 aa13□□□□□ -0.33
RABGAP1-201ENST00000317419 VCYO14598 125 aa13□□□□□ -0.33
RABGAP1-201ENST00000317419 TRGC2P03986 189 aa13□□□□□ -0.33
RABGAP1-201ENST00000317419 TMEM97Q5BJF2 176 aa13□□□□□ -0.33
RABGAP1-201ENST00000317419 NTM-AS1Q6ZSK4 140 aa13□□□□□ -0.33
RABGAP1-201ENST00000317419 LINC00588Q9Y4M8 146 aa13□□□□□ -0.33
RABGAP1-201ENST00000317419 DNAH1Q9P2D7 4330 aa13□□□□□ -0.33
RABGAP1-201ENST00000317419 I3L3M4 83 aa13□□□□□ -0.33
RABGAP1-201ENST00000317419 SMIM2Q9BVW6 85 aa13□□□□□ -0.33
RABGAP1-201ENST00000317419 MRPS16Q9Y3D3 137 aaKnown RBP13□□□□□ -0.33
RABGAP1-201ENST00000317419 LELP1Q5T871 98 aa12.99□□□□□ -0.33
RABGAP1-201ENST00000317419 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.99□□□□□ -0.33
RABGAP1-201ENST00000317419 MAP1LC3AQ9H492 121 aa12.99□□□□□ -0.33
RABGAP1-201ENST00000317419 CCL18P55774 89 aa12.98□□□□□ -0.33
RABGAP1-201ENST00000317419 UPK3BQ9BT76 320 aa12.98□□□□□ -0.33
RABGAP1-201ENST00000317419 TSHBP01222 138 aa12.98□□□□□ -0.33
RABGAP1-201ENST00000317419 TRBV6-8A0A0A6YYG3 113 aa12.97□□□□□ -0.33
RABGAP1-201ENST00000317419 PMCHP20382 165 aa12.97□□□□□ -0.33
RABGAP1-201ENST00000317419 LGALS9CQ6DKI2 356 aa12.97□□□□□ -0.33
RABGAP1-201ENST00000317419 IQCJQ1A5X6 159 aa12.97□□□□□ -0.33
RABGAP1-201ENST00000317419 COTL1Q14019 142 aa12.96□□□□□ -0.33
RABGAP1-201ENST00000317419 Q8N8P6 123 aa12.96□□□□□ -0.33
RABGAP1-201ENST00000317419 C18orf32Q8TCD1 76 aa12.96□□□□□ -0.34
RABGAP1-201ENST00000317419 LINC01546A6NGU7 62 aa12.95□□□□□ -0.34
RABGAP1-201ENST00000317419 LYSTQ99698 3801 aa12.94□□□□□ -0.34
RABGAP1-201ENST00000317419 LOC389332A0A1B0GUA5 103 aa12.94□□□□□ -0.34
RABGAP1-201ENST00000317419 TCAPO15273 167 aa12.94□□□□□ -0.34
RABGAP1-201ENST00000317419 ESDP10768 282 aa12.94□□□□□ -0.34
RABGAP1-201ENST00000317419 KIR2DL4Q99706 377 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms