RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 SAMD5Q5TGI4 173 aa8.52□□□□□ -1.05
PTPN2-201ENST00000309660 PEMTQ9UBM1 199 aa8.52□□□□□ -1.05
PTPN2-201ENST00000309660 M0QY20 66 aa8.52□□□□□ -1.05
PTPN2-201ENST00000309660 FABP2P12104 132 aa8.52□□□□□ -1.05
PTPN2-201ENST00000309660 AMTNQ6UX39 209 aa8.52□□□□□ -1.05
PTPN2-201ENST00000309660 LINC01587Q99440 93 aa8.52□□□□□ -1.05
PTPN2-201ENST00000309660 NIPBLQ6KC79 2804 aaeCLIP8.51□□□□□ -1.05
PTPN2-201ENST00000309660 ITPR2Q14571 2701 aa8.51□□□□□ -1.05
PTPN2-201ENST00000309660 TRGV11A0A075B6L2 103 aa8.51□□□□□ -1.05
PTPN2-201ENST00000309660 MYMXA0A1B0GTQ4 84 aa8.51□□□□□ -1.05
PTPN2-201ENST00000309660 TSHBP01222 138 aa8.51□□□□□ -1.05
PTPN2-201ENST00000309660 SRSF9Q13242 221 aaKnown RBP eCLIP8.51□□□□□ -1.05
PTPN2-201ENST00000309660 HIGD1BQ9P298 99 aa8.51□□□□□ -1.05
PTPN2-201ENST00000309660 HELZ2Q9BYK8 2649 aaKnown RBP8.51□□□□□ -1.05
PTPN2-201ENST00000309660 NBPF19A0A087WUL8 3843 aa8.51□□□□□ -1.05
PTPN2-201ENST00000309660 SFTA2Q6UW10 78 aa8.51□□□□□ -1.05
PTPN2-201ENST00000309660 ODF3Q96PU9 254 aa8.51□□□□□ -1.05
PTPN2-201ENST00000309660 A0A1W2PPM0 123 aa8.5□□□□□ -1.05
PTPN2-201ENST00000309660 XCL2Q9UBD3 114 aa8.5□□□□□ -1.05
PTPN2-201ENST00000309660 H3BMM0 161 aa8.5□□□□□ -1.05
PTPN2-201ENST00000309660 PMVKQ15126 192 aa8.5□□□□□ -1.05
PTPN2-201ENST00000309660 MORN3Q6PF18 240 aaPredicted RBP8.5□□□□□ -1.05
PTPN2-201ENST00000309660 VPS25Q9BRG1 176 aa8.5□□□□□ -1.05
PTPN2-201ENST00000309660 RBMY1BA6NDE4 496 aaKnown RBP8.5□□□□□ -1.05
PTPN2-201ENST00000309660 RBMY1EA6NEQ0 496 aaKnown RBP8.5□□□□□ -1.05
PTPN2-201ENST00000309660 RBMY1DP0C7P1 496 aaKnown RBP8.5□□□□□ -1.05
PTPN2-201ENST00000309660 Q6ZSV7 163 aa8.5□□□□□ -1.05
PTPN2-201ENST00000309660 TRPT1Q86TN4 253 aaKnown RBP8.5□□□□□ -1.05
PTPN2-201ENST00000309660 RNASE13Q5GAN3 156 aaKnown RBP8.49□□□□□ -1.05
PTPN2-201ENST00000309660 IGIPA6NJ69 53 aa8.49□□□□□ -1.05
PTPN2-201ENST00000309660 Q9UF83 564 aa8.49□□□□□ -1.05
PTPN2-201ENST00000309660 CBY1Q9Y3M2 126 aa8.49□□□□□ -1.05
PTPN2-201ENST00000309660 TENM4Q6N022 2769 aa8.49□□□□□ -1.05
PTPN2-201ENST00000309660 DNAJC9-AS1A6NH13 148 aa8.49□□□□□ -1.05
PTPN2-201ENST00000309660 K7EP34 96 aa8.49□□□□□ -1.05
PTPN2-201ENST00000309660 PLEKHB2Q96CS7 222 aa8.49□□□□□ -1.05
PTPN2-201ENST00000309660 MAP6D1Q9H9H5 199 aa8.49□□□□□ -1.05
PTPN2-201ENST00000309660 TRBV27A0A0K0K1C4 114 aa8.48□□□□□ -1.05
PTPN2-201ENST00000309660 HERVK_113P61574 105 aa8.48□□□□□ -1.05
PTPN2-201ENST00000309660 C4orf3Q8WVX3 66 aa8.48□□□□□ -1.05
PTPN2-201ENST00000309660 RAX2Q96IS3 184 aa8.48□□□□□ -1.05
PTPN2-201ENST00000309660 MRPL16Q9NX20 251 aaKnown RBP8.48□□□□□ -1.05
PTPN2-201ENST00000309660 FASNP49327 2511 aaKnown RBP8.48□□□□□ -1.05
PTPN2-201ENST00000309660 E9PLD3 99 aa8.48□□□□□ -1.05
PTPN2-201ENST00000309660 SAP30O75446 220 aa8.48□□□□□ -1.05
PTPN2-201ENST00000309660 OCIAD2Q56VL3 154 aa8.48□□□□□ -1.05
PTPN2-201ENST00000309660 CEMP1Q6PRD7 247 aaPredicted RBP8.48□□□□□ -1.05
PTPN2-201ENST00000309660 MTURNQ8N3F0 131 aa8.48□□□□□ -1.05
PTPN2-201ENST00000309660 IGHV3-38A0A0C4DH36 116 aa8.48□□□□□ -1.05
PTPN2-201ENST00000309660 KRTAP1-3Q8IUG1 177 aa8.48□□□□□ -1.05
PTPN2-201ENST00000309660 SPAG8Q99932 426 aaPredicted RBP8.48□□□□□ -1.05
PTPN2-201ENST00000309660 TNFRSF18Q9Y5U5 241 aa8.48□□□□□ -1.05
PTPN2-201ENST00000309660 IGLV4-69A0A075B6H9 119 aa8.47□□□□□ -1.05
PTPN2-201ENST00000309660 LRRC75A-AS1Q8N1F1 130 aa8.47□□□□□ -1.05
PTPN2-201ENST00000309660 POM121L12Q8N7R1 296 aa8.47□□□□□ -1.05
PTPN2-201ENST00000309660 PHLDA1Q8WV24 401 aaPredicted RBP8.47□□□□□ -1.05
PTPN2-201ENST00000309660 YAE1D1Q9NRH1 226 aa8.47□□□□□ -1.05
PTPN2-201ENST00000309660 C12orf74Q32Q52 190 aa8.47□□□□□ -1.05
PTPN2-201ENST00000309660 RNF152Q8N8N0 203 aa8.47□□□□□ -1.05
PTPN2-201ENST00000309660 TM2D2Q9BX73 214 aa8.47□□□□□ -1.05
PTPN2-201ENST00000309660 HECTD1Q9ULT8 2610 aa8.47□□□□□ -1.05
PTPN2-201ENST00000309660 I3L3M4 83 aa8.46□□□□□ -1.05
PTPN2-201ENST00000309660 APOMO95445 188 aa8.46□□□□□ -1.05
PTPN2-201ENST00000309660 RBX1P62877 108 aa8.46□□□□□ -1.05
PTPN2-201ENST00000309660 DEFB114Q30KQ6 69 aa8.46□□□□□ -1.05
PTPN2-201ENST00000309660 ZNRF2Q8NHG8 242 aa8.46□□□□□ -1.05
PTPN2-201ENST00000309660 ZNF479Q96JC4 524 aa8.46□□□□□ -1.05
PTPN2-201ENST00000309660 FN1P02751 2386 aaKnown RBP8.46□□□□□ -1.05
PTPN2-201ENST00000309660 HIVEP2P31629 2446 aa8.46□□□□□ -1.05
PTPN2-201ENST00000309660 CD28P10747 220 aa8.46□□□□□ -1.05
PTPN2-201ENST00000309660 RPL24P83731 157 aaKnown RBP8.46□□□□□ -1.06
PTPN2-201ENST00000309660 TMEM141Q96I45 108 aa8.46□□□□□ -1.06
PTPN2-201ENST00000309660 VCX2Q9H322 139 aa8.46□□□□□ -1.06
PTPN2-201ENST00000309660 ESM1Q9NQ30 184 aa8.46□□□□□ -1.06
PTPN2-201ENST00000309660 TRBV6-5A0A0K0K1A5 114 aa8.45□□□□□ -1.06
PTPN2-201ENST00000309660 ZNF415Q09FC8 603 aa8.45□□□□□ -1.06
PTPN2-201ENST00000309660 UFSP1Q6NVU6 142 aa8.45□□□□□ -1.06
PTPN2-201ENST00000309660 STHQ8IWL8 128 aa8.45□□□□□ -1.06
PTPN2-201ENST00000309660 TIMM17AQ99595 171 aa8.45□□□□□ -1.06
PTPN2-201ENST00000309660 A0A0J9YXV3 536 aa8.45□□□□□ -1.06
PTPN2-201ENST00000309660 C20orf203Q8NBC4 194 aa8.45□□□□□ -1.06
PTPN2-201ENST00000309660 CITED2Q99967 270 aaPredicted RBP8.45□□□□□ -1.06
PTPN2-201ENST00000309660 M0R2P5 195 aa8.44□□□□□ -1.06
PTPN2-201ENST00000309660 IGHV3-53P01767 116 aa8.44□□□□□ -1.06
PTPN2-201ENST00000309660 LGALS3P17931 250 aaKnown RBP8.44□□□□□ -1.06
PTPN2-201ENST00000309660 Q6ZSN1 163 aa8.44□□□□□ -1.06
PTPN2-201ENST00000309660 Q8N2B8 174 aa8.44□□□□□ -1.06
PTPN2-201ENST00000309660 IGLL5B9A064 214 aa8.44□□□□□ -1.06
PTPN2-201ENST00000309660 CCL24O00175 119 aa8.44□□□□□ -1.06
PTPN2-201ENST00000309660 PCP4P48539 62 aa8.44□□□□□ -1.06
PTPN2-201ENST00000309660 RIPPLY3P57055 190 aa8.44□□□□□ -1.06
PTPN2-201ENST00000309660 TSPEAR-AS2P59090 65 aa8.44□□□□□ -1.06
PTPN2-201ENST00000309660 RPL32P62910 135 aaKnown RBP8.44□□□□□ -1.06
PTPN2-201ENST00000309660 PAPPA-AS1Q5QFB9 102 aa8.44□□□□□ -1.06
PTPN2-201ENST00000309660 TRBV7-3A0A075B6L6 115 aa8.44□□□□□ -1.06
PTPN2-201ENST00000309660 K7ERU9 68 aa8.44□□□□□ -1.06
PTPN2-201ENST00000309660 INSP01308 110 aa8.44□□□□□ -1.06
PTPN2-201ENST00000309660 AZU1P20160 251 aa8.43□□□□□ -1.06
PTPN2-201ENST00000309660 SPXQ9BT56 116 aa8.43□□□□□ -1.06
PTPN2-201ENST00000309660 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms